RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 CTRLP40313 264 aa7.72□□□□□ -1.17
SKA3-206ENST00000475251 CAMPP49913 170 aa7.72□□□□□ -1.17
SKA3-206ENST00000475251 CCL20P78556 96 aa7.72□□□□□ -1.17
SKA3-206ENST00000475251 CD164L2Q6UWJ8 174 aa7.72□□□□□ -1.17
SKA3-206ENST00000475251 GATD1Q8NB37 220 aa7.72□□□□□ -1.17
SKA3-206ENST00000475251 FAM210AQ96ND0 272 aa7.72□□□□□ -1.17
SKA3-206ENST00000475251 ZNF345Q14585 488 aa7.71□□□□□ -1.18
SKA3-206ENST00000475251 C1orf137Q5JT78 98 aa7.71□□□□□ -1.18
SKA3-206ENST00000475251 DIRC1Q969H9 104 aa7.71□□□□□ -1.18
SKA3-206ENST00000475251 CNFNQ9BYD5 112 aa7.71□□□□□ -1.18
SKA3-206ENST00000475251 IGLV4-69A0A075B6H9 119 aa7.7□□□□□ -1.18
SKA3-206ENST00000475251 SDHAF1A6NFY7 115 aa7.7□□□□□ -1.18
SKA3-206ENST00000475251 I3L3M4 83 aa7.7□□□□□ -1.18
SKA3-206ENST00000475251 MALP21145 153 aa7.7□□□□□ -1.18
SKA3-206ENST00000475251 TSKUQ8WUA8 353 aa7.7□□□□□ -1.18
SKA3-206ENST00000475251 GNG13Q9P2W3 67 aa7.7□□□□□ -1.18
SKA3-206ENST00000475251 G3V3Q6 166 aa7.69□□□□□ -1.18
SKA3-206ENST00000475251 TEX46H3BTG2 121 aa7.69□□□□□ -1.18
SKA3-206ENST00000475251 APOMO95445 188 aa7.69□□□□□ -1.18
SKA3-206ENST00000475251 PMCHP20382 165 aa7.69□□□□□ -1.18
SKA3-206ENST00000475251 RPL39LQ96EH5 51 aaKnown RBP7.69□□□□□ -1.18
SKA3-206ENST00000475251 MRAP2Q96G30 205 aa7.69□□□□□ -1.18
SKA3-206ENST00000475251 A0A1W2PNN7 141 aa7.68□□□□□ -1.18
SKA3-206ENST00000475251 PDE6DO43924 150 aa7.68□□□□□ -1.18
SKA3-206ENST00000475251 C9orf116Q5BN46 136 aaPredicted RBP7.68□□□□□ -1.18
SKA3-206ENST00000475251 PRR26Q8N8Z3 221 aa7.68□□□□□ -1.18
SKA3-206ENST00000475251 CAMK2N2Q96S95 79 aa7.68□□□□□ -1.18
SKA3-206ENST00000475251 IGLV1-50A0A075B6I6 118 aa7.67□□□□□ -1.18
SKA3-206ENST00000475251 KANTRA0A1W2PQU2 76 aa7.67□□□□□ -1.18
SKA3-206ENST00000475251 RAB19A4D1S5 217 aa7.67□□□□□ -1.18
SKA3-206ENST00000475251 C1orf196B1AJZ1 125 aa7.67□□□□□ -1.18
SKA3-206ENST00000475251 COX7A2LO14548 114 aa7.67□□□□□ -1.18
SKA3-206ENST00000475251 BCL2P10415 239 aa7.67□□□□□ -1.18
SKA3-206ENST00000475251 RPL18AQ02543 176 aaKnown RBP7.67□□□□□ -1.18
SKA3-206ENST00000475251 MRPL52Q86TS9 123 aaKnown RBP7.67□□□□□ -1.18
SKA3-206ENST00000475251 NUP35Q8NFH5 326 aa7.67□□□□□ -1.18
SKA3-206ENST00000475251 RPP21Q9H633 154 aaKnown RBP7.67□□□□□ -1.18
SKA3-206ENST00000475251 CDC42SE2Q9NRR3 84 aa7.67□□□□□ -1.18
SKA3-206ENST00000475251 TRAV1-1A0A0B4J248 108 aa7.66□□□□□ -1.18
SKA3-206ENST00000475251 IGLV7-43P04211 117 aa7.66□□□□□ -1.18
SKA3-206ENST00000475251 ESDP10768 282 aa7.66□□□□□ -1.18
SKA3-206ENST00000475251 MEF2BQ02080 365 aaPredicted RBP7.66□□□□□ -1.18
SKA3-206ENST00000475251 SMAGPQ0VAQ4 97 aa7.66□□□□□ -1.18
SKA3-206ENST00000475251 NUDT10Q8NFP7 164 aa7.66□□□□□ -1.18
SKA3-206ENST00000475251 NUDT11Q96G61 164 aa7.66□□□□□ -1.18
SKA3-206ENST00000475251 C2orf48Q96LS8 159 aa7.66□□□□□ -1.18
SKA3-206ENST00000475251 MED9Q9NWA0 146 aa7.66□□□□□ -1.18
SKA3-206ENST00000475251 TRBV6-5A0A0K0K1A5 114 aa7.65□□□□□ -1.18
SKA3-206ENST00000475251 H0Y9J4 135 aa7.65□□□□□ -1.18
SKA3-206ENST00000475251 BCL2L11O43521 198 aa7.65□□□□□ -1.18
SKA3-206ENST00000475251 LCE3BQ5TA77 95 aa7.65□□□□□ -1.18
SKA3-206ENST00000475251 ST20Q9HBF5 79 aa7.65□□□□□ -1.18
SKA3-206ENST00000475251 MUC2Q02817 5179 aa7.65□□□□□ -1.19
SKA3-206ENST00000475251 TRBV20OR9-2A0A075B6H5 130 aa7.64□□□□□ -1.19
SKA3-206ENST00000475251 C7orf77A4D0Y5 90 aa7.64□□□□□ -1.19
SKA3-206ENST00000475251 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.64□□□□□ -1.19
SKA3-206ENST00000475251 RPL13AP40429 203 aaKnown RBP7.64□□□□□ -1.19
SKA3-206ENST00000475251 UBE2D1P51668 147 aa7.64□□□□□ -1.19
SKA3-206ENST00000475251 PRR4Q16378 134 aa7.64□□□□□ -1.19
SKA3-206ENST00000475251 RNF151Q2KHN1 245 aa7.64□□□□□ -1.19
SKA3-206ENST00000475251 PHF5AQ7RTV0 110 aaKnown RBP7.64□□□□□ -1.19
SKA3-206ENST00000475251 A0A087WZ39 114 aa7.63□□□□□ -1.19
SKA3-206ENST00000475251 HMSDA8MTL9 139 aa7.63□□□□□ -1.19
SKA3-206ENST00000475251 TSHBP01222 138 aa7.63□□□□□ -1.19
SKA3-206ENST00000475251 TMEM242Q9NWH2 141 aa7.63□□□□□ -1.19
SKA3-206ENST00000475251 BORCS7Q96B45 105 aa7.62□□□□□ -1.19
SKA3-206ENST00000475251 IMMP2LQ96T52 175 aa7.62□□□□□ -1.19
SKA3-206ENST00000475251 TRBV27A0A0K0K1C4 114 aa7.61□□□□□ -1.19
SKA3-206ENST00000475251 F8WDY8 70 aa7.61□□□□□ -1.19
SKA3-206ENST00000475251 SMLR1H3BR10 107 aa7.61□□□□□ -1.19
SKA3-206ENST00000475251 TAGLN2P37802 199 aaKnown RBP7.61□□□□□ -1.19
SKA3-206ENST00000475251 FOXA3P55318 350 aaPredicted RBP7.61□□□□□ -1.19
SKA3-206ENST00000475251 OR10D4PQ8NGN7 298 aa7.61□□□□□ -1.19
SKA3-206ENST00000475251 RNASE7Q9H1E1 156 aaKnown RBP7.61□□□□□ -1.19
SKA3-206ENST00000475251 CSDC2Q9Y534 153 aaKnown RBP7.61□□□□□ -1.19
SKA3-206ENST00000475251 SPAG11BQ08648 103 aa7.6□□□□□ -1.19
SKA3-206ENST00000475251 TRAV13-1A0A0B4J241 112 aa7.59□□□□□ -1.19
SKA3-206ENST00000475251 A8MWL6 223 aa7.59□□□□□ -1.19
SKA3-206ENST00000475251 FCER1GP30273 86 aa7.59□□□□□ -1.19
SKA3-206ENST00000475251 POLR2KP53803 58 aaKnown RBP7.59□□□□□ -1.19
SKA3-206ENST00000475251 OPRPNQ99935 248 aaPredicted RBP7.59□□□□□ -1.19
SKA3-206ENST00000475251 MRPL35Q9NZE8 188 aaKnown RBP7.59□□□□□ -1.19
SKA3-206ENST00000475251 VCYO14598 125 aa7.58□□□□□ -1.2
SKA3-206ENST00000475251 C5orf38Q86SI9 138 aa7.58□□□□□ -1.2
SKA3-206ENST00000475251 OCC1Q8TAD7 63 aa7.58□□□□□ -1.2
SKA3-206ENST00000475251 TMEM18Q96B42 140 aa7.58□□□□□ -1.2
SKA3-206ENST00000475251 K7EN84 100 aa7.57□□□□□ -1.2
SKA3-206ENST00000475251 NDUFA1O15239 70 aa7.57□□□□□ -1.2
SKA3-206ENST00000475251 GATCO43716 136 aaKnown RBP7.57□□□□□ -1.2
SKA3-206ENST00000475251 PPP1R17O96001 155 aa7.57□□□□□ -1.2
SKA3-206ENST00000475251 KRTAP1-4P0C5Y4 121 aa7.57□□□□□ -1.2
SKA3-206ENST00000475251 TLX1NBP0CAT3 122 aa7.57□□□□□ -1.2
SKA3-206ENST00000475251 TMEM241Q24JQ0 296 aa7.57□□□□□ -1.2
SKA3-206ENST00000475251 KIR2DL4Q99706 377 aa7.57□□□□□ -1.2
SKA3-206ENST00000475251 KRTAP9-9Q9BYP9 154 aa7.57□□□□□ -1.2
SKA3-206ENST00000475251 KRTAP9-4Q9BYQ2 154 aa7.57□□□□□ -1.2
SKA3-206ENST00000475251 TMEM191AQ9H0A3 160 aa7.57□□□□□ -1.2
SKA3-206ENST00000475251 CARHSP1Q9Y2V2 147 aaKnown RBP7.57□□□□□ -1.2
SKA3-206ENST00000475251 UBE2D4Q9Y2X8 147 aa7.57□□□□□ -1.2
SKA3-206ENST00000475251 UBE2BP63146 152 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms