RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 IGKV2-40A0A087WW87 121 aaPredicted RBP3.6□□□□□ -1.83
HDAC3-206ENST00000471968 TRBV6-8A0A0A6YYG3 113 aa3.6□□□□□ -1.83
HDAC3-206ENST00000471968 C20orf202A1L168 122 aa3.6□□□□□ -1.83
HDAC3-206ENST00000471968 XKRY2A2RUG3 117 aa3.6□□□□□ -1.83
HDAC3-206ENST00000471968 IGKV2D-40P01614 121 aaPredicted RBP3.6□□□□□ -1.83
HDAC3-206ENST00000471968 MT2AP02795 61 aa3.6□□□□□ -1.83
HDAC3-206ENST00000471968 TEX43Q6ZNM6 134 aa3.6□□□□□ -1.83
HDAC3-206ENST00000471968 FAM213BQ8TBF2 198 aa3.6□□□□□ -1.83
HDAC3-206ENST00000471968 ATP5SQ99766 215 aa3.6□□□□□ -1.83
HDAC3-206ENST00000471968 MIEN1Q9BRT3 115 aa3.6□□□□□ -1.83
HDAC3-206ENST00000471968 AAMDCQ9H7C9 122 aa3.6□□□□□ -1.83
HDAC3-206ENST00000471968 LYRM2Q9NU23 88 aaPredicted RBP3.6□□□□□ -1.83
HDAC3-206ENST00000471968 ANAPC11Q9NYG5 84 aa3.6□□□□□ -1.83
HDAC3-206ENST00000471968 TIMM9Q9Y5J7 89 aa3.6□□□□□ -1.83
HDAC3-206ENST00000471968 TRAV8-4A0A0B4J246 113 aa3.59□□□□□ -1.83
HDAC3-206ENST00000471968 ZNF727A8MUV8 499 aa3.59□□□□□ -1.83
HDAC3-206ENST00000471968 DIRC3C9JPN6 131 aa3.59□□□□□ -1.83
HDAC3-206ENST00000471968 P01737 135 aa3.59□□□□□ -1.83
HDAC3-206ENST00000471968 TYMSP04818 313 aa3.59□□□□□ -1.83
HDAC3-206ENST00000471968 IGLC2P0DOY2 106 aa3.59□□□□□ -1.83
HDAC3-206ENST00000471968 CSN1S1P47710 185 aa3.59□□□□□ -1.83
HDAC3-206ENST00000471968 RPL29P47914 159 aaKnown RBP3.59□□□□□ -1.83
HDAC3-206ENST00000471968 TAS2R45P59539 299 aa3.59□□□□□ -1.83
HDAC3-206ENST00000471968 MIC13Q5XKP0 118 aa3.59□□□□□ -1.83
HDAC3-206ENST00000471968 TMEM252Q8N6L7 170 aa3.59□□□□□ -1.83
HDAC3-206ENST00000471968 OR5C1Q8NGR4 320 aa3.59□□□□□ -1.83
HDAC3-206ENST00000471968 CARD19Q96LW7 228 aa3.59□□□□□ -1.83
HDAC3-206ENST00000471968 WFDC1Q9HC57 220 aa3.59□□□□□ -1.83
HDAC3-206ENST00000471968 ZNF492Q9P255 531 aa3.59□□□□□ -1.83
HDAC3-206ENST00000471968 A0A1W2PPV4 95 aa3.58□□□□□ -1.84
HDAC3-206ENST00000471968 IGSF23A1L1A6 192 aa3.58□□□□□ -1.84
HDAC3-206ENST00000471968 PRSS46E5RG02 174 aa3.58□□□□□ -1.84
HDAC3-206ENST00000471968 OR7C2O60412 319 aa3.58□□□□□ -1.84
HDAC3-206ENST00000471968 IFNA1P01562 189 aa3.58□□□□□ -1.84
HDAC3-206ENST00000471968 HIST1H1EP10412 219 aaKnown RBP3.58□□□□□ -1.84
HDAC3-206ENST00000471968 FHITP49789 147 aa3.58□□□□□ -1.84
HDAC3-206ENST00000471968 Q6AWC8 147 aa3.58□□□□□ -1.84
HDAC3-206ENST00000471968 PATE2Q6UY27 113 aa3.58□□□□□ -1.84
HDAC3-206ENST00000471968 ANAPC16Q96DE5 110 aa3.58□□□□□ -1.84
HDAC3-206ENST00000471968 LINC00526Q96FQ7 95 aa3.58□□□□□ -1.84
HDAC3-206ENST00000471968 MGST2Q99735 147 aa3.58□□□□□ -1.84
HDAC3-206ENST00000471968 SMIM3Q9BZL3 60 aa3.58□□□□□ -1.84
HDAC3-206ENST00000471968 PARLQ9H300 379 aa3.58□□□□□ -1.84
HDAC3-206ENST00000471968 NAT8Q9UHE5 227 aa3.58□□□□□ -1.84
HDAC3-206ENST00000471968 WDR83OSQ9Y284 106 aa3.58□□□□□ -1.84
HDAC3-206ENST00000471968 GVQW2A0A096LPI5 108 aaPredicted RBP3.57□□□□□ -1.84
HDAC3-206ENST00000471968 LOC107984640A0A0U1RRK4 108 aa3.57□□□□□ -1.84
HDAC3-206ENST00000471968 MAP1LC3B2A6NCE7 125 aa3.57□□□□□ -1.84
HDAC3-206ENST00000471968 GAGE12HA6NDE8 117 aa3.57□□□□□ -1.84
HDAC3-206ENST00000471968 PGPEP1LA6NFU8 196 aa3.57□□□□□ -1.84
HDAC3-206ENST00000471968 F5H697 171 aa3.57□□□□□ -1.84
HDAC3-206ENST00000471968 F6UZH7 168 aa3.57□□□□□ -1.84
HDAC3-206ENST00000471968 ZNF861PO60384 105 aa3.57□□□□□ -1.84
HDAC3-206ENST00000471968 SCGB1D1O95968 90 aa3.57□□□□□ -1.84
HDAC3-206ENST00000471968 MT1FP04733 61 aa3.57□□□□□ -1.84
HDAC3-206ENST00000471968 BCL2P10415 239 aa3.57□□□□□ -1.84
HDAC3-206ENST00000471968 ESDP10768 282 aa3.57□□□□□ -1.84
HDAC3-206ENST00000471968 LGALS3P17931 250 aaKnown RBP3.57□□□□□ -1.84
HDAC3-206ENST00000471968 KRTAP5-9P26371 169 aa3.57□□□□□ -1.84
HDAC3-206ENST00000471968 ATP6V0CP27449 155 aa3.57□□□□□ -1.84
HDAC3-206ENST00000471968 PLP1P60201 277 aa3.57□□□□□ -1.84
HDAC3-206ENST00000471968 UBE2G2P60604 165 aa3.57□□□□□ -1.84
HDAC3-206ENST00000471968 ARL16Q0P5N6 197 aa3.57□□□□□ -1.84
HDAC3-206ENST00000471968 GAGE6Q13070 117 aa3.57□□□□□ -1.84
HDAC3-206ENST00000471968 UBE2V1Q13404 147 aa3.57□□□□□ -1.84
HDAC3-206ENST00000471968 ZFP2Q6ZN57 461 aa3.57□□□□□ -1.84
HDAC3-206ENST00000471968 LINC01551Q86U37 167 aa3.57□□□□□ -1.84
HDAC3-206ENST00000471968 DAND5Q8N907 189 aa3.57□□□□□ -1.84
HDAC3-206ENST00000471968 NUDT10Q8NFP7 164 aa3.57□□□□□ -1.84
HDAC3-206ENST00000471968 CMTM2Q8TAZ6 248 aa3.57□□□□□ -1.84
HDAC3-206ENST00000471968 ALKBH7Q9BT30 221 aaPredicted RBP3.57□□□□□ -1.84
HDAC3-206ENST00000471968 NPCDR1Q9BY65 106 aa3.57□□□□□ -1.84
HDAC3-206ENST00000471968 MAP1LC3BQ9GZQ8 125 aa3.57□□□□□ -1.84
HDAC3-206ENST00000471968 UBE2D4Q9Y2X8 147 aa3.57□□□□□ -1.84
HDAC3-206ENST00000471968 TMEM250H0YL14 139 aa3.56□□□□□ -1.84
HDAC3-206ENST00000471968 TNFRSF6BO95407 300 aa3.56□□□□□ -1.84
HDAC3-206ENST00000471968 UBE2L3P68036 154 aaKnown RBP3.56□□□□□ -1.84
HDAC3-206ENST00000471968 PET117Q6UWS5 81 aa3.56□□□□□ -1.84
HDAC3-206ENST00000471968 SMIM12Q96EX1 92 aa3.56□□□□□ -1.84
HDAC3-206ENST00000471968 VAMP8Q9BV40 100 aa3.56□□□□□ -1.84
HDAC3-206ENST00000471968 WDR61Q9GZS3 305 aaKnown RBP3.56□□□□□ -1.84
HDAC3-206ENST00000471968 C11orf1Q9H5F2 150 aa3.56□□□□□ -1.84
HDAC3-206ENST00000471968 UQCR10Q9UDW1 63 aa3.56□□□□□ -1.84
HDAC3-206ENST00000471968 PHLDA3Q9Y5J5 127 aa3.56□□□□□ -1.84
HDAC3-206ENST00000471968 TRAV9-1A0A075B6T8 112 aa3.55□□□□□ -1.84
HDAC3-206ENST00000471968 K7EQM0 130 aa3.55□□□□□ -1.84
HDAC3-206ENST00000471968 FGF6P10767 208 aa3.55□□□□□ -1.84
HDAC3-206ENST00000471968 CEBPGP53567 150 aa3.55□□□□□ -1.84
HDAC3-206ENST00000471968 UBE2D3P61077 147 aa3.55□□□□□ -1.84
HDAC3-206ENST00000471968 UBE2D2P62837 147 aa3.55□□□□□ -1.84
HDAC3-206ENST00000471968 UBE2BP63146 152 aa3.55□□□□□ -1.84
HDAC3-206ENST00000471968 CCL20P78556 96 aa3.55□□□□□ -1.84
HDAC3-206ENST00000471968 FOXI1Q12951 378 aa3.55□□□□□ -1.84
HDAC3-206ENST00000471968 PDE6HQ13956 83 aa3.55□□□□□ -1.84
HDAC3-206ENST00000471968 EXOC3-AS1Q8N2X6 119 aa3.55□□□□□ -1.84
HDAC3-206ENST00000471968 MBD3L1Q8WWY6 194 aa3.55□□□□□ -1.84
HDAC3-206ENST00000471968 NDFIP1Q9BT67 221 aa3.55□□□□□ -1.84
HDAC3-206ENST00000471968 PSMG3Q9BT73 122 aaPredicted RBP3.55□□□□□ -1.84
HDAC3-206ENST00000471968 TRBV19A0A075B6N1 114 aa3.54□□□□□ -1.84
HDAC3-206ENST00000471968 TRBV7-9A0A0J9YWB2 115 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms