RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 FAM168BA1KXE4 195 aa4.12□□□□□ -1.75
HDAC1-204ENST00000471488 MAP1LC3B2A6NCE7 125 aa4.12□□□□□ -1.75
HDAC1-204ENST00000471488 INMT-MINDY4F8WBC2 141 aa4.12□□□□□ -1.75
HDAC1-204ENST00000471488 APOMO95445 188 aa4.12□□□□□ -1.75
HDAC1-204ENST00000471488 RPL35P42766 123 aaKnown RBP4.12□□□□□ -1.75
HDAC1-204ENST00000471488 ZNF726P1Q15940 193 aa4.12□□□□□ -1.75
HDAC1-204ENST00000471488 Q5BKY6 102 aa4.12□□□□□ -1.75
HDAC1-204ENST00000471488 BAGE2Q86Y30 109 aa4.12□□□□□ -1.75
HDAC1-204ENST00000471488 PGLYRP4Q96LB8 373 aa4.12□□□□□ -1.75
HDAC1-204ENST00000471488 C2orf88Q9BSF0 95 aa4.12□□□□□ -1.75
HDAC1-204ENST00000471488 SSBP4Q9BWG4 385 aaPredicted RBP4.12□□□□□ -1.75
HDAC1-204ENST00000471488 MAP1LC3BQ9GZQ8 125 aa4.12□□□□□ -1.75
HDAC1-204ENST00000471488 BIN3Q9NQY0 253 aa4.12□□□□□ -1.75
HDAC1-204ENST00000471488 BORCS7-ASMTA0A0B4J1R7 106 aa4.11□□□□□ -1.75
HDAC1-204ENST00000471488 A0A1B0GV90 55 aa4.11□□□□□ -1.75
HDAC1-204ENST00000471488 SCO2A0A1W2PP80 73 aa4.11□□□□□ -1.75
HDAC1-204ENST00000471488 PAGE4O60829 102 aa4.11□□□□□ -1.75
HDAC1-204ENST00000471488 TRGC1P0CF51 173 aa4.11□□□□□ -1.75
HDAC1-204ENST00000471488 COX8CQ7Z4L0 72 aa4.11□□□□□ -1.75
HDAC1-204ENST00000471488 MLST8Q9BVC4 326 aa4.11□□□□□ -1.75
HDAC1-204ENST00000471488 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.1□□□□□ -1.75
HDAC1-204ENST00000471488 TCAPO15273 167 aa4.1□□□□□ -1.75
HDAC1-204ENST00000471488 BCL2L11O43521 198 aa4.1□□□□□ -1.75
HDAC1-204ENST00000471488 CXCL1P09341 107 aa4.1□□□□□ -1.75
HDAC1-204ENST00000471488 LINC00614P0C842 121 aa4.1□□□□□ -1.75
HDAC1-204ENST00000471488 PMCHP20382 165 aa4.1□□□□□ -1.75
HDAC1-204ENST00000471488 NTF3P20783 257 aa4.1□□□□□ -1.75
HDAC1-204ENST00000471488 AKR1D1P51857 326 aa4.1□□□□□ -1.75
HDAC1-204ENST00000471488 MEF2BQ02080 365 aaPredicted RBP4.1□□□□□ -1.75
HDAC1-204ENST00000471488 GAGE2EQ4V326 116 aa4.1□□□□□ -1.75
HDAC1-204ENST00000471488 RPL7L1Q6DKI1 246 aaKnown RBP4.1□□□□□ -1.75
HDAC1-204ENST00000471488 KRTAP11-1Q8IUC1 163 aa4.1□□□□□ -1.75
HDAC1-204ENST00000471488 TCTE3Q8IZS6 198 aa4.1□□□□□ -1.75
HDAC1-204ENST00000471488 NUP35Q8NFH5 326 aa4.1□□□□□ -1.75
HDAC1-204ENST00000471488 TSKUQ8WUA8 353 aa4.1□□□□□ -1.75
HDAC1-204ENST00000471488 RPL39LQ96EH5 51 aaKnown RBP4.1□□□□□ -1.75
HDAC1-204ENST00000471488 TCEAL7Q9BRU2 100 aa4.1□□□□□ -1.75
HDAC1-204ENST00000471488 MED9Q9NWA0 146 aa4.1□□□□□ -1.75
HDAC1-204ENST00000471488 GAGE2DQ9UEU5 116 aa4.1□□□□□ -1.75
HDAC1-204ENST00000471488 COX7A2LO14548 114 aa4.09□□□□□ -1.75
HDAC1-204ENST00000471488 KRTAP1-4P0C5Y4 121 aa4.09□□□□□ -1.75
HDAC1-204ENST00000471488 G0S2P27469 103 aa4.09□□□□□ -1.75
HDAC1-204ENST00000471488 LINC01547P58512 204 aaPredicted RBP4.09□□□□□ -1.75
HDAC1-204ENST00000471488 SPAG11BQ08648 103 aa4.09□□□□□ -1.75
HDAC1-204ENST00000471488 TWIST1Q15672 202 aa4.09□□□□□ -1.75
HDAC1-204ENST00000471488 RNASE13Q5GAN3 156 aaKnown RBP4.09□□□□□ -1.75
HDAC1-204ENST00000471488 CLLU1Q5K131 121 aa4.09□□□□□ -1.75
HDAC1-204ENST00000471488 CD164L2Q6UWJ8 174 aa4.09□□□□□ -1.75
HDAC1-204ENST00000471488 LYZL1Q6UWQ5 148 aa4.09□□□□□ -1.75
HDAC1-204ENST00000471488 C5orf38Q86SI9 138 aa4.09□□□□□ -1.75
HDAC1-204ENST00000471488 XKRY2A2RUG3 117 aa4.08□□□□□ -1.76
HDAC1-204ENST00000471488 M0QXV9 152 aa4.08□□□□□ -1.76
HDAC1-204ENST00000471488 UPK1BO75841 260 aa4.08□□□□□ -1.76
HDAC1-204ENST00000471488 SRSF3P84103 164 aaKnown RBP4.08□□□□□ -1.76
HDAC1-204ENST00000471488 GATD1Q8NB37 220 aa4.08□□□□□ -1.76
HDAC1-204ENST00000471488 TYMSOSQ8TAI1 123 aa4.08□□□□□ -1.76
HDAC1-204ENST00000471488 SFT2D1Q8WV19 159 aa4.08□□□□□ -1.76
HDAC1-204ENST00000471488 ALG5Q9Y673 324 aa4.08□□□□□ -1.76
HDAC1-204ENST00000471488 FXYD6-FXYD2A0A087WZ82 144 aa4.07□□□□□ -1.76
HDAC1-204ENST00000471488 TRAV13-1A0A0B4J241 112 aa4.07□□□□□ -1.76
HDAC1-204ENST00000471488 C19orf71A6NCJ1 209 aa4.07□□□□□ -1.76
HDAC1-204ENST00000471488 SDHAF1A6NFY7 115 aa4.07□□□□□ -1.76
HDAC1-204ENST00000471488 H7C423 109 aa4.07□□□□□ -1.76
HDAC1-204ENST00000471488 IFNA1P01562 189 aa4.07□□□□□ -1.76
HDAC1-204ENST00000471488 ZNF25P17030 456 aaPredicted RBP4.07□□□□□ -1.76
HDAC1-204ENST00000471488 TAGLN2P37802 199 aaKnown RBP4.07□□□□□ -1.76
HDAC1-204ENST00000471488 FHITP49789 147 aa4.07□□□□□ -1.76
HDAC1-204ENST00000471488 RPS20P60866 119 aaKnown RBP4.07□□□□□ -1.76
HDAC1-204ENST00000471488 SMIM15Q7Z3B0 74 aa4.07□□□□□ -1.76
HDAC1-204ENST00000471488 COMMD7Q86VX2 200 aa4.07□□□□□ -1.76
HDAC1-204ENST00000471488 MRAP2Q96G30 205 aa4.07□□□□□ -1.76
HDAC1-204ENST00000471488 C14orf144Q96I85 54 aa4.07□□□□□ -1.76
HDAC1-204ENST00000471488 TMEM242Q9NWH2 141 aa4.07□□□□□ -1.76
HDAC1-204ENST00000471488 NCR2O95944 276 aa4.06□□□□□ -1.76
HDAC1-204ENST00000471488 IGLC6P0CF74 106 aa4.06□□□□□ -1.76
HDAC1-204ENST00000471488 LCE2DQ5TA82 110 aaPredicted RBP4.06□□□□□ -1.76
HDAC1-204ENST00000471488 TMUB2Q71RG4 321 aa4.06□□□□□ -1.76
HDAC1-204ENST00000471488 FAM213BQ8TBF2 198 aa4.06□□□□□ -1.76
HDAC1-204ENST00000471488 IMMP2LQ96T52 175 aa4.06□□□□□ -1.76
HDAC1-204ENST00000471488 CARHSP1Q9Y2V2 147 aaKnown RBP4.06□□□□□ -1.76
HDAC1-204ENST00000471488 IGLV7-46A0A075B6I9 117 aa4.05□□□□□ -1.76
HDAC1-204ENST00000471488 C1orf196B1AJZ1 125 aa4.05□□□□□ -1.76
HDAC1-204ENST00000471488 F2Z2F3 143 aa4.05□□□□□ -1.76
HDAC1-204ENST00000471488 I3L3M4 83 aa4.05□□□□□ -1.76
HDAC1-204ENST00000471488 CRYGAP11844 174 aa4.05□□□□□ -1.76
HDAC1-204ENST00000471488 FOXA3P55318 350 aaPredicted RBP4.05□□□□□ -1.76
HDAC1-204ENST00000471488 CENPWQ5EE01 88 aa4.05□□□□□ -1.76
HDAC1-204ENST00000471488 KCNRGQ8N5I3 272 aa4.05□□□□□ -1.76
HDAC1-204ENST00000471488 ORAOV1Q8WV07 137 aa4.05□□□□□ -1.76
HDAC1-204ENST00000471488 C2orf48Q96LS8 159 aa4.05□□□□□ -1.76
HDAC1-204ENST00000471488 CDC42SE2Q9NRR3 84 aa4.05□□□□□ -1.76
HDAC1-204ENST00000471488 ANAPC11Q9NYG5 84 aa4.05□□□□□ -1.76
HDAC1-204ENST00000471488 A0A087X002 238 aa4.04□□□□□ -1.76
HDAC1-204ENST00000471488 NDUFA1O15239 70 aa4.04□□□□□ -1.76
HDAC1-204ENST00000471488 FCER1GP30273 86 aa4.04□□□□□ -1.76
HDAC1-204ENST00000471488 TEX261Q6UWH6 196 aa4.04□□□□□ -1.76
HDAC1-204ENST00000471488 LINC00173Q6ZV60 143 aa4.04□□□□□ -1.76
HDAC1-204ENST00000471488 C9orf62Q8N4C0 152 aa4.04□□□□□ -1.76
HDAC1-204ENST00000471488 MARVELD1Q9BSK0 173 aa4.04□□□□□ -1.76
HDAC1-204ENST00000471488 MED28Q9H204 178 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms