RNA–Protein interactions for RNA: ENST00000470585.5

SF3A3-205, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-205ENST00000470585 MAP1LC3BQ9GZQ8 125 aa4.09□□□□□ -1.75
SF3A3-205ENST00000470585 A0A1W2PNN7 141 aa4.08□□□□□ -1.76
SF3A3-205ENST00000470585 PFDN1O60925 122 aa4.08□□□□□ -1.76
SF3A3-205ENST00000470585 APCSP02743 223 aa4.08□□□□□ -1.76
SF3A3-205ENST00000470585 SMAGPQ0VAQ4 97 aa4.08□□□□□ -1.76
SF3A3-205ENST00000470585 BIN3Q9NQY0 253 aa4.08□□□□□ -1.76
SF3A3-205ENST00000470585 IGKV3OR2-268A0A0C4DH90 116 aa4.07□□□□□ -1.76
SF3A3-205ENST00000470585 C19orf71A6NCJ1 209 aa4.07□□□□□ -1.76
SF3A3-205ENST00000470585 C1orf196B1AJZ1 125 aa4.07□□□□□ -1.76
SF3A3-205ENST00000470585 G3V3Q6 166 aa4.07□□□□□ -1.76
SF3A3-205ENST00000470585 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.07□□□□□ -1.76
SF3A3-205ENST00000470585 XCL1P47992 114 aa4.07□□□□□ -1.76
SF3A3-205ENST00000470585 DEFA1P59665 94 aa4.07□□□□□ -1.76
SF3A3-205ENST00000470585 DEFA3P59666 94 aa4.07□□□□□ -1.76
SF3A3-205ENST00000470585 MEF2BQ02080 365 aaPredicted RBP4.07□□□□□ -1.76
SF3A3-205ENST00000470585 GAGE2BQ13066 116 aa4.07□□□□□ -1.76
SF3A3-205ENST00000470585 RNASEKQ6P5S7 137 aaKnown RBP4.07□□□□□ -1.76
SF3A3-205ENST00000470585 C9orf62Q8N4C0 152 aa4.07□□□□□ -1.76
SF3A3-205ENST00000470585 OR2D3Q8NGH3 330 aa4.07□□□□□ -1.76
SF3A3-205ENST00000470585 IMMP2LQ96T52 175 aa4.07□□□□□ -1.76
SF3A3-205ENST00000470585 CSDC2Q9Y534 153 aaKnown RBP4.07□□□□□ -1.76
SF3A3-205ENST00000470585 TRBV6-5A0A0K0K1A5 114 aa4.06□□□□□ -1.76
SF3A3-205ENST00000470585 MUC21A0A140T8X8 626 aa4.06□□□□□ -1.76
SF3A3-205ENST00000470585 UMAD1C9J7I0 102 aa4.06□□□□□ -1.76
SF3A3-205ENST00000470585 COX7A2LO14548 114 aa4.06□□□□□ -1.76
SF3A3-205ENST00000470585 PAGE4O60829 102 aa4.06□□□□□ -1.76
SF3A3-205ENST00000470585 TLX1NBP0CAT3 122 aa4.06□□□□□ -1.76
SF3A3-205ENST00000470585 MALP21145 153 aa4.06□□□□□ -1.76
SF3A3-205ENST00000470585 CTRLP40313 264 aa4.06□□□□□ -1.76
SF3A3-205ENST00000470585 TPRXLQ17RH7 258 aa4.06□□□□□ -1.76
SF3A3-205ENST00000470585 RPL7L1Q6DKI1 246 aaKnown RBP4.06□□□□□ -1.76
SF3A3-205ENST00000470585 TMUB2Q71RG4 321 aa4.06□□□□□ -1.76
SF3A3-205ENST00000470585 OR10D4PQ8NGN7 298 aa4.06□□□□□ -1.76
SF3A3-205ENST00000470585 C11orf52Q96A22 123 aa4.06□□□□□ -1.76
SF3A3-205ENST00000470585 CAMK2N2Q96S95 79 aa4.06□□□□□ -1.76
SF3A3-205ENST00000470585 CDC42SE2Q9NRR3 84 aa4.06□□□□□ -1.76
SF3A3-205ENST00000470585 MRPL35Q9NZE8 188 aaKnown RBP4.06□□□□□ -1.76
SF3A3-205ENST00000470585 A0A087WZ39 114 aa4.05□□□□□ -1.76
SF3A3-205ENST00000470585 SDHAF1A6NFY7 115 aa4.05□□□□□ -1.76
SF3A3-205ENST00000470585 I3L3M4 83 aa4.05□□□□□ -1.76
SF3A3-205ENST00000470585 IFNA1P01562 189 aa4.05□□□□□ -1.76
SF3A3-205ENST00000470585 GIPP09681 153 aaPredicted RBP4.05□□□□□ -1.76
SF3A3-205ENST00000470585 TMEM241Q24JQ0 296 aa4.05□□□□□ -1.76
SF3A3-205ENST00000470585 PHF5AQ7RTV0 110 aaKnown RBP4.05□□□□□ -1.76
SF3A3-205ENST00000470585 SMIM15Q7Z3B0 74 aa4.05□□□□□ -1.76
SF3A3-205ENST00000470585 GATD1Q8NB37 220 aa4.05□□□□□ -1.76
SF3A3-205ENST00000470585 MBD3L1Q8WWY6 194 aa4.05□□□□□ -1.76
SF3A3-205ENST00000470585 MRAP2Q96G30 205 aa4.05□□□□□ -1.76
SF3A3-205ENST00000470585 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.04□□□□□ -1.76
SF3A3-205ENST00000470585 IGKV2-29A2NJV5 120 aaPredicted RBP4.04□□□□□ -1.76
SF3A3-205ENST00000470585 BCL2L11O43521 198 aa4.04□□□□□ -1.76
SF3A3-205ENST00000470585 BCL2P10415 239 aa4.04□□□□□ -1.76
SF3A3-205ENST00000470585 RPL35P42766 123 aaKnown RBP4.04□□□□□ -1.76
SF3A3-205ENST00000470585 RPL18AQ02543 176 aaKnown RBP4.04□□□□□ -1.76
SF3A3-205ENST00000470585 LYZL1Q6UWQ5 148 aa4.04□□□□□ -1.76
SF3A3-205ENST00000470585 LINC00526Q96FQ7 95 aa4.04□□□□□ -1.76
SF3A3-205ENST00000470585 TPPP3Q9BW30 176 aa4.04□□□□□ -1.76
SF3A3-205ENST00000470585 RPP21Q9H633 154 aaKnown RBP4.04□□□□□ -1.76
SF3A3-205ENST00000470585 CRCT1Q9UGL9 99 aa4.04□□□□□ -1.76
SF3A3-205ENST00000470585 TRBV27A0A0K0K1C4 114 aa4.03□□□□□ -1.76
SF3A3-205ENST00000470585 NUPR1O60356 82 aa4.03□□□□□ -1.76
SF3A3-205ENST00000470585 SSTP61278 116 aa4.03□□□□□ -1.76
SF3A3-205ENST00000470585 CCL20P78556 96 aa4.03□□□□□ -1.76
SF3A3-205ENST00000470585 MANBALQ9NQG1 85 aa4.03□□□□□ -1.76
SF3A3-205ENST00000470585 TMEM238LA0A1B0GVL6 79 aa4.02□□□□□ -1.77
SF3A3-205ENST00000470585 C7orf77A4D0Y5 90 aa4.02□□□□□ -1.77
SF3A3-205ENST00000470585 NDUFA1O15239 70 aa4.02□□□□□ -1.77
SF3A3-205ENST00000470585 ZNF861PO60384 105 aa4.02□□□□□ -1.77
SF3A3-205ENST00000470585 PMCHP20382 165 aa4.02□□□□□ -1.77
SF3A3-205ENST00000470585 TWIST1Q15672 202 aa4.02□□□□□ -1.77
SF3A3-205ENST00000470585 KCNRGQ8N5I3 272 aa4.02□□□□□ -1.77
SF3A3-205ENST00000470585 SFT2D1Q8WV19 159 aa4.02□□□□□ -1.77
SF3A3-205ENST00000470585 TIMM21Q9BVV7 248 aa4.02□□□□□ -1.77
SF3A3-205ENST00000470585 CYTL1Q9NRR1 136 aa4.02□□□□□ -1.77
SF3A3-205ENST00000470585 PDE6DO43924 150 aa4.01□□□□□ -1.77
SF3A3-205ENST00000470585 PPP1R17O96001 155 aa4.01□□□□□ -1.77
SF3A3-205ENST00000470585 TSHBP01222 138 aa4.01□□□□□ -1.77
SF3A3-205ENST00000470585 CRYGAP11844 174 aa4.01□□□□□ -1.77
SF3A3-205ENST00000470585 GNG4P50150 75 aa4.01□□□□□ -1.77
SF3A3-205ENST00000470585 LINC00310P59036 64 aa4.01□□□□□ -1.77
SF3A3-205ENST00000470585 IFITM3Q01628 133 aa4.01□□□□□ -1.77
SF3A3-205ENST00000470585 SPAG11BQ08648 103 aa4.01□□□□□ -1.77
SF3A3-205ENST00000470585 CENPWQ5EE01 88 aa4.01□□□□□ -1.77
SF3A3-205ENST00000470585 CDIP1Q9H305 208 aa4.01□□□□□ -1.77
SF3A3-205ENST00000470585 SMDT1Q9H4I9 107 aa4.01□□□□□ -1.77
SF3A3-205ENST00000470585 FXYD6-FXYD2A0A087WZ82 144 aa4□□□□□ -1.77
SF3A3-205ENST00000470585 TRBV30A0A0K0K1B3 111 aa4□□□□□ -1.77
SF3A3-205ENST00000470585 RAB19A4D1S5 217 aa4□□□□□ -1.77
SF3A3-205ENST00000470585 M0QXV9 152 aa4□□□□□ -1.77
SF3A3-205ENST00000470585 TCAPO15273 167 aa4□□□□□ -1.77
SF3A3-205ENST00000470585 POLR2KP53803 58 aaKnown RBP4□□□□□ -1.77
SF3A3-205ENST00000470585 UBE2BP63146 152 aa4□□□□□ -1.77
SF3A3-205ENST00000470585 ZNF345Q14585 488 aa4□□□□□ -1.77
SF3A3-205ENST00000470585 TMEM18Q96B42 140 aa4□□□□□ -1.77
SF3A3-205ENST00000470585 RPL39LQ96EH5 51 aaKnown RBP4□□□□□ -1.77
SF3A3-205ENST00000470585 ST20Q9HBF5 79 aa4□□□□□ -1.77
SF3A3-205ENST00000470585 ALG5Q9Y673 324 aa4□□□□□ -1.77
SF3A3-205ENST00000470585 TEX46H3BTG2 121 aa3.99□□□□□ -1.77
SF3A3-205ENST00000470585 TAGLN2P37802 199 aaKnown RBP3.99□□□□□ -1.77
SF3A3-205ENST00000470585 RPL28P46779 137 aaKnown RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms