RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 A0A1B0GW15 77 aa7.27□□□□□ -1.25
COL4A6-205ENST00000468338 C14orf177Q52M58 125 aa7.27□□□□□ -1.25
COL4A6-205ENST00000468338 FAM104BQ5XKR9 115 aa7.27□□□□□ -1.25
COL4A6-205ENST00000468338 CLPSL2Q6UWE3 100 aa7.27□□□□□ -1.25
COL4A6-205ENST00000468338 NRACQ8N912 160 aa7.27□□□□□ -1.25
COL4A6-205ENST00000468338 ST20Q9HBF5 79 aa7.27□□□□□ -1.25
COL4A6-205ENST00000468338 A0A1B0GXF2 115 aa7.26□□□□□ -1.25
COL4A6-205ENST00000468338 UBE2L6O14933 153 aa7.26□□□□□ -1.25
COL4A6-205ENST00000468338 TSHBP01222 138 aa7.26□□□□□ -1.25
COL4A6-205ENST00000468338 APCSP02743 223 aa7.26□□□□□ -1.25
COL4A6-205ENST00000468338 RAB14P61106 215 aa7.26□□□□□ -1.25
COL4A6-205ENST00000468338 IFITM2Q01629 132 aa7.26□□□□□ -1.25
COL4A6-205ENST00000468338 PPP1R17O96001 155 aa7.25□□□□□ -1.25
COL4A6-205ENST00000468338 FGF6P10767 208 aa7.25□□□□□ -1.25
COL4A6-205ENST00000468338 PMCHP20382 165 aa7.25□□□□□ -1.25
COL4A6-205ENST00000468338 PNRC1Q12796 327 aaPredicted RBP7.25□□□□□ -1.25
COL4A6-205ENST00000468338 MRPL51Q4U2R6 128 aaKnown RBP7.25□□□□□ -1.25
COL4A6-205ENST00000468338 TRBV24-1A0A075B6N3 115 aa7.24□□□□□ -1.25
COL4A6-205ENST00000468338 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.24□□□□□ -1.25
COL4A6-205ENST00000468338 IGKV2-29A2NJV5 120 aaPredicted RBP7.24□□□□□ -1.25
COL4A6-205ENST00000468338 LINC00862A6NCI5 91 aa7.24□□□□□ -1.25
COL4A6-205ENST00000468338 SMKR1H3BMG3 65 aa7.24□□□□□ -1.25
COL4A6-205ENST00000468338 VCYO14598 125 aa7.24□□□□□ -1.25
COL4A6-205ENST00000468338 HLA-DQA1P01909 254 aa7.24□□□□□ -1.25
COL4A6-205ENST00000468338 PRSS1P07477 247 aa7.24□□□□□ -1.25
COL4A6-205ENST00000468338 ZNF25P17030 456 aaPredicted RBP7.24□□□□□ -1.25
COL4A6-205ENST00000468338 IGLV10-54A0A075B6I4 117 aa7.23□□□□□ -1.25
COL4A6-205ENST00000468338 EPM2AB3EWF7 344 aa7.23□□□□□ -1.25
COL4A6-205ENST00000468338 PPP1R2P9O14990 202 aa7.23□□□□□ -1.25
COL4A6-205ENST00000468338 RPL32P62910 135 aaKnown RBP7.23□□□□□ -1.25
COL4A6-205ENST00000468338 LINC01620Q4KN68 170 aa7.23□□□□□ -1.25
COL4A6-205ENST00000468338 MRPL52Q86TS9 123 aaKnown RBP7.23□□□□□ -1.25
COL4A6-205ENST00000468338 TMEM242Q9NWH2 141 aa7.23□□□□□ -1.25
COL4A6-205ENST00000468338 S100A8P05109 93 aa7.22□□□□□ -1.25
COL4A6-205ENST00000468338 HBBP68871 147 aa7.22□□□□□ -1.25
COL4A6-205ENST00000468338 AMMECR1LQ6DCA0 310 aa7.22□□□□□ -1.25
COL4A6-205ENST00000468338 MRPL54Q6P161 138 aaKnown RBP7.22□□□□□ -1.25
COL4A6-205ENST00000468338 ATP5L2Q7Z4Y8 100 aa7.22□□□□□ -1.25
COL4A6-205ENST00000468338 C20orf78Q9BR46 151 aa7.22□□□□□ -1.25
COL4A6-205ENST00000468338 C7orf77A4D0Y5 90 aa7.21□□□□□ -1.26
COL4A6-205ENST00000468338 HAMPP81172 84 aa7.21□□□□□ -1.26
COL4A6-205ENST00000468338 RNASEKQ6P5S7 137 aaKnown RBP7.21□□□□□ -1.26
COL4A6-205ENST00000468338 UQCC3Q6UW78 93 aa7.21□□□□□ -1.26
COL4A6-205ENST00000468338 C9orf163Q8N9P6 203 aa7.21□□□□□ -1.26
COL4A6-205ENST00000468338 OR5A1Q8NGJ0 315 aa7.21□□□□□ -1.26
COL4A6-205ENST00000468338 CDC42SE2Q9NRR3 84 aa7.21□□□□□ -1.26
COL4A6-205ENST00000468338 CSDC2Q9Y534 153 aaKnown RBP7.21□□□□□ -1.26
COL4A6-205ENST00000468338 VPS13BQ7Z7G8 4022 aa7.2□□□□□ -1.26
COL4A6-205ENST00000468338 F8W036 122 aa7.2□□□□□ -1.26
COL4A6-205ENST00000468338 PHOX2AO14813 284 aa7.2□□□□□ -1.26
COL4A6-205ENST00000468338 PPBPP02775 128 aa7.2□□□□□ -1.26
COL4A6-205ENST00000468338 SMR3BP02814 79 aaPredicted RBP7.2□□□□□ -1.26
COL4A6-205ENST00000468338 MT-ND4LP03901 98 aa7.2□□□□□ -1.26
COL4A6-205ENST00000468338 CKS2P33552 79 aa7.2□□□□□ -1.26
COL4A6-205ENST00000468338 CNBPP62633 177 aaKnown RBP7.2□□□□□ -1.26
COL4A6-205ENST00000468338 Q5VSD8 79 aa7.2□□□□□ -1.26
COL4A6-205ENST00000468338 TMEM18Q96B42 140 aa7.2□□□□□ -1.26
COL4A6-205ENST00000468338 SLPIP03973 132 aa7.19□□□□□ -1.26
COL4A6-205ENST00000468338 ADCYAP1P18509 176 aa7.19□□□□□ -1.26
COL4A6-205ENST00000468338 C15orf56Q8N910 161 aa7.19□□□□□ -1.26
COL4A6-205ENST00000468338 CHCHD10Q8WYQ3 142 aaPredicted RBP7.19□□□□□ -1.26
COL4A6-205ENST00000468338 BTF3L4Q96K17 158 aa7.19□□□□□ -1.26
COL4A6-205ENST00000468338 KIR2DL4Q99706 377 aa7.19□□□□□ -1.26
COL4A6-205ENST00000468338 CHAC1Q9BUX1 264 aa7.19□□□□□ -1.26
COL4A6-205ENST00000468338 LINC00959A0A1B0GUT2 108 aa7.18□□□□□ -1.26
COL4A6-205ENST00000468338 TMEM218A2RU14 115 aa7.18□□□□□ -1.26
COL4A6-205ENST00000468338 D6R8Y8 96 aa7.18□□□□□ -1.26
COL4A6-205ENST00000468338 PET117Q6UWS5 81 aa7.18□□□□□ -1.26
COL4A6-205ENST00000468338 SDIM1Q6ZPB5 146 aa7.18□□□□□ -1.26
COL4A6-205ENST00000468338 SCXQ7RTU7 201 aa7.18□□□□□ -1.26
COL4A6-205ENST00000468338 ZNF664Q8N3J9 261 aa7.18□□□□□ -1.26
COL4A6-205ENST00000468338 TMEM101Q96IK0 257 aa7.18□□□□□ -1.26
COL4A6-205ENST00000468338 TIMM21Q9BVV7 248 aa7.18□□□□□ -1.26
COL4A6-205ENST00000468338 SMIM2Q9BVW6 85 aa7.18□□□□□ -1.26
COL4A6-205ENST00000468338 UBE2D4Q9Y2X8 147 aa7.18□□□□□ -1.26
COL4A6-205ENST00000468338 IGKV3OR2-268A0A0C4DH90 116 aa7.17□□□□□ -1.26
COL4A6-205ENST00000468338 TCAPO15273 167 aa7.17□□□□□ -1.26
COL4A6-205ENST00000468338 NPYP01303 97 aa7.17□□□□□ -1.26
COL4A6-205ENST00000468338 FCER1GP30273 86 aa7.17□□□□□ -1.26
COL4A6-205ENST00000468338 IMMP2LQ96T52 175 aa7.17□□□□□ -1.26
COL4A6-205ENST00000468338 FLG2Q5D862 2391 aaPredicted RBP7.17□□□□□ -1.26
COL4A6-205ENST00000468338 hDV102S1A0JD36 115 aa7.16□□□□□ -1.26
COL4A6-205ENST00000468338 SMAGPQ0VAQ4 97 aa7.16□□□□□ -1.26
COL4A6-205ENST00000468338 TMEM136Q6ZRR5 245 aa7.16□□□□□ -1.26
COL4A6-205ENST00000468338 ORMDL3Q8N138 153 aa7.16□□□□□ -1.26
COL4A6-205ENST00000468338 CIRBP-AS1Q8TBR5 109 aa7.16□□□□□ -1.26
COL4A6-205ENST00000468338 FAM104AQ969W3 186 aa7.16□□□□□ -1.26
COL4A6-205ENST00000468338 GVQW2A0A096LPI5 108 aaPredicted RBP7.15□□□□□ -1.26
COL4A6-205ENST00000468338 LOC100996750A0A140TA64 210 aa7.15□□□□□ -1.26
COL4A6-205ENST00000468338 CCL25O15444 150 aa7.15□□□□□ -1.26
COL4A6-205ENST00000468338 CIRBPQ14011 172 aaKnown RBP7.15□□□□□ -1.26
COL4A6-205ENST00000468338 CD164L2Q6UWJ8 174 aa7.15□□□□□ -1.26
COL4A6-205ENST00000468338 SEC11CQ9BY50 192 aa7.15□□□□□ -1.26
COL4A6-205ENST00000468338 KRTAP4-6Q9BYQ5 205 aa7.15□□□□□ -1.26
COL4A6-205ENST00000468338 LAMTOR2Q9Y2Q5 125 aa7.15□□□□□ -1.26
COL4A6-205ENST00000468338 XCL1P47992 114 aa7.14□□□□□ -1.27
COL4A6-205ENST00000468338 SS18Q15532 418 aa7.14□□□□□ -1.27
COL4A6-205ENST00000468338 C10orf91Q5T1B1 145 aa7.14□□□□□ -1.27
COL4A6-205ENST00000468338 PRELID3AQ96N28 172 aa7.14□□□□□ -1.27
COL4A6-205ENST00000468338 SRRM2Q9UQ35 2752 aaKnown RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 333.7 ms