RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 MBD2Q9UBB5 411 aa2.39□□□□□ -2.03
SSR3-204ENST00000467733 PSG8Q9UQ74 426 aa2.39□□□□□ -2.03
SSR3-204ENST00000467733 LOC107984640A0A0U1RRK4 108 aa2.38□□□□□ -2.03
SSR3-204ENST00000467733 FABP5P3A8MUU1 101 aa2.38□□□□□ -2.03
SSR3-204ENST00000467733 KRBOX1C9JBD0 128 aa2.38□□□□□ -2.03
SSR3-204ENST00000467733 NDUFB6O95139 128 aa2.38□□□□□ -2.03
SSR3-204ENST00000467733 TCRAP04437 139 aa2.38□□□□□ -2.03
SSR3-204ENST00000467733 PYDC2Q56P42 97 aa2.38□□□□□ -2.03
SSR3-204ENST00000467733 C9orf116Q5BN46 136 aaPredicted RBP2.38□□□□□ -2.03
SSR3-204ENST00000467733 SAPCD1Q5SSQ6 148 aa2.38□□□□□ -2.03
SSR3-204ENST00000467733 FAM162BQ5T6X4 162 aa2.38□□□□□ -2.03
SSR3-204ENST00000467733 PHF5AQ7RTV0 110 aaKnown RBP2.38□□□□□ -2.03
SSR3-204ENST00000467733 PRNTQ86SH4 94 aa2.38□□□□□ -2.03
SSR3-204ENST00000467733 CHCHD10Q8WYQ3 142 aaPredicted RBP2.38□□□□□ -2.03
SSR3-204ENST00000467733 TMEM243Q9BU79 118 aa2.38□□□□□ -2.03
SSR3-204ENST00000467733 WDR61Q9GZS3 305 aaKnown RBP2.38□□□□□ -2.03
SSR3-204ENST00000467733 MED28Q9H204 178 aa2.38□□□□□ -2.03
SSR3-204ENST00000467733 RPP21Q9H633 154 aaKnown RBP2.38□□□□□ -2.03
SSR3-204ENST00000467733 ANAPC11Q9NYG5 84 aa2.38□□□□□ -2.03
SSR3-204ENST00000467733 IGHV1-58A0A0C4DH39 117 aa2.37□□□□□ -2.03
SSR3-204ENST00000467733 GRIFINA4D1Z8 144 aa2.37□□□□□ -2.03
SSR3-204ENST00000467733 FAM25EA8MYX2 175 aa2.37□□□□□ -2.03
SSR3-204ENST00000467733 C17orf112F2Z3M2 114 aa2.37□□□□□ -2.03
SSR3-204ENST00000467733 M0R036 132 aa2.37□□□□□ -2.03
SSR3-204ENST00000467733 ATP6V1G1O75348 118 aa2.37□□□□□ -2.03
SSR3-204ENST00000467733 FGF6P10767 208 aa2.37□□□□□ -2.03
SSR3-204ENST00000467733 TMBIM6P55061 237 aa2.37□□□□□ -2.03
SSR3-204ENST00000467733 SYCNQ0VAF6 134 aa2.37□□□□□ -2.03
SSR3-204ENST00000467733 TSKUQ8WUA8 353 aa2.37□□□□□ -2.03
SSR3-204ENST00000467733 LINC00526Q96FQ7 95 aa2.37□□□□□ -2.03
SSR3-204ENST00000467733 RETNLBQ9BQ08 111 aa2.37□□□□□ -2.03
SSR3-204ENST00000467733 KRTAP4-1Q9BYQ7 146 aa2.37□□□□□ -2.03
SSR3-204ENST00000467733 ARL2-SNX15V9GYD0 113 aa2.37□□□□□ -2.03
SSR3-204ENST00000467733 IGKV3OR2-268A0A0C4DH90 116 aa2.36□□□□□ -2.03
SSR3-204ENST00000467733 UBE2L6O14933 153 aa2.36□□□□□ -2.03
SSR3-204ENST00000467733 SH2D1AO60880 128 aa2.36□□□□□ -2.03
SSR3-204ENST00000467733 APOMO95445 188 aa2.36□□□□□ -2.03
SSR3-204ENST00000467733 ARL14EPLP0DKL9 152 aa2.36□□□□□ -2.03
SSR3-204ENST00000467733 BCL2P10415 239 aa2.36□□□□□ -2.03
SSR3-204ENST00000467733 CXCL6P80162 114 aa2.36□□□□□ -2.03
SSR3-204ENST00000467733 ASB16-AS1Q495Z4 193 aa2.36□□□□□ -2.03
SSR3-204ENST00000467733 Q86TA4 180 aa2.36□□□□□ -2.03
SSR3-204ENST00000467733 KRTAP11-1Q8IUC1 163 aa2.36□□□□□ -2.03
SSR3-204ENST00000467733 OR10AG1Q8NH19 301 aa2.36□□□□□ -2.03
SSR3-204ENST00000467733 PGLYRP4Q96LB8 373 aa2.36□□□□□ -2.03
SSR3-204ENST00000467733 EPDR1Q9UM22 224 aa2.36□□□□□ -2.03
SSR3-204ENST00000467733 V9GYH0 126 aa2.36□□□□□ -2.03
SSR3-204ENST00000467733 TMSB15BA0A087X1C1 80 aa2.35□□□□□ -2.03
SSR3-204ENST00000467733 NAP1L6A6NFF2 107 aa2.35□□□□□ -2.03
SSR3-204ENST00000467733 H3BMQ9 156 aa2.35□□□□□ -2.03
SSR3-204ENST00000467733 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.35□□□□□ -2.03
SSR3-204ENST00000467733 BTCP35070 178 aa2.35□□□□□ -2.03
SSR3-204ENST00000467733 HERV-K104P63124 156 aa2.35□□□□□ -2.03
SSR3-204ENST00000467733 MT1HP80294 61 aa2.35□□□□□ -2.03
SSR3-204ENST00000467733 MEF2BQ02080 365 aaPredicted RBP2.35□□□□□ -2.03
SSR3-204ENST00000467733 RPL18AQ02543 176 aaKnown RBP2.35□□□□□ -2.03
SSR3-204ENST00000467733 IL15RAQ13261 267 aa2.35□□□□□ -2.03
SSR3-204ENST00000467733 EIF5AL1Q6IS14 154 aaKnown RBP2.35□□□□□ -2.03
SSR3-204ENST00000467733 ISOC2Q96AB3 205 aa2.35□□□□□ -2.03
SSR3-204ENST00000467733 AP1S3Q96PC3 154 aa2.35□□□□□ -2.03
SSR3-204ENST00000467733 SDHCQ99643 169 aaPredicted RBP2.35□□□□□ -2.03
SSR3-204ENST00000467733 SEC22CQ9BRL7 303 aa2.35□□□□□ -2.03
SSR3-204ENST00000467733 ZNF471Q9BX82 626 aaPredicted RBP2.35□□□□□ -2.03
SSR3-204ENST00000467733 IGLV4-69A0A075B6H9 119 aa2.34□□□□□ -2.03
SSR3-204ENST00000467733 A0A1W2PPV4 95 aa2.34□□□□□ -2.03
SSR3-204ENST00000467733 M0QY20 66 aa2.34□□□□□ -2.03
SSR3-204ENST00000467733 HMGB3O15347 200 aaKnown RBP2.34□□□□□ -2.03
SSR3-204ENST00000467733 SIX6O95475 246 aa2.34□□□□□ -2.03
SSR3-204ENST00000467733 CXCL1P09341 107 aa2.34□□□□□ -2.03
SSR3-204ENST00000467733 GCHFRP30047 84 aa2.34□□□□□ -2.03
SSR3-204ENST00000467733 XCL1P47992 114 aa2.34□□□□□ -2.03
SSR3-204ENST00000467733 CRIP1P50238 77 aa2.34□□□□□ -2.03
SSR3-204ENST00000467733 NKX2-5P52952 324 aaPredicted RBP2.34□□□□□ -2.03
SSR3-204ENST00000467733 DEFA3P59666 94 aa2.34□□□□□ -2.03
SSR3-204ENST00000467733 LINC00173Q6ZV60 143 aa2.34□□□□□ -2.03
SSR3-204ENST00000467733 NUP35Q8NFH5 326 aa2.34□□□□□ -2.03
SSR3-204ENST00000467733 PPDPFQ9H3Y8 114 aa2.34□□□□□ -2.03
SSR3-204ENST00000467733 FLGP20930 4061 aaPredicted RBP2.34□□□□□ -2.04
SSR3-204ENST00000467733 CCDC160A6NGH7 325 aa2.33□□□□□ -2.04
SSR3-204ENST00000467733 M0QXV9 152 aa2.33□□□□□ -2.04
SSR3-204ENST00000467733 PEX7O00628 323 aa2.33□□□□□ -2.04
SSR3-204ENST00000467733 CCL25O15444 150 aa2.33□□□□□ -2.04
SSR3-204ENST00000467733 SNAI2O43623 268 aa2.33□□□□□ -2.04
SSR3-204ENST00000467733 MGPP08493 103 aa2.33□□□□□ -2.04
SSR3-204ENST00000467733 OR5AL1P0C617 328 aa2.33□□□□□ -2.04
SSR3-204ENST00000467733 STAG3L2P0CL84 134 aa2.33□□□□□ -2.04
SSR3-204ENST00000467733 STAG3L3P0CL85 134 aa2.33□□□□□ -2.04
SSR3-204ENST00000467733 SMIM17P0DL12 118 aa2.33□□□□□ -2.04
SSR3-204ENST00000467733 RPL12P30050 165 aaKnown RBP2.33□□□□□ -2.04
SSR3-204ENST00000467733 CDC34P49427 236 aaPredicted RBP2.33□□□□□ -2.04
SSR3-204ENST00000467733 CTAG1AP78358 180 aa2.33□□□□□ -2.04
SSR3-204ENST00000467733 COTL1Q14019 142 aa2.33□□□□□ -2.04
SSR3-204ENST00000467733 SPANXN1Q5VSR9 72 aa2.33□□□□□ -2.04
SSR3-204ENST00000467733 AMMECR1LQ6DCA0 310 aa2.33□□□□□ -2.04
SSR3-204ENST00000467733 FAM19A5Q7Z5A7 132 aaPredicted RBP2.33□□□□□ -2.04
SSR3-204ENST00000467733 LINC00304Q8N9R0 145 aa2.33□□□□□ -2.04
SSR3-204ENST00000467733 OR5A1Q8NGJ0 315 aa2.33□□□□□ -2.04
SSR3-204ENST00000467733 SCGB1C1Q8TD33 95 aa2.33□□□□□ -2.04
SSR3-204ENST00000467733 CAMK2N2Q96S95 79 aa2.33□□□□□ -2.04
SSR3-204ENST00000467733 SMIM3Q9BZL3 60 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms