RNA–Protein interactions for RNA: ENST00000443660.5

MRPL40-202, Transcript of mitochondrial ribosomal protein L40, humanhuman

TSL 2

Gene MRPL40, Length 954 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-202ENST00000443660 CENPWQ5EE01 88 aa8.97□□□□□ -0.97
MRPL40-202ENST00000443660 TEX261Q6UWH6 196 aa8.97□□□□□ -0.97
MRPL40-202ENST00000443660 CYTL1Q9NRR1 136 aa8.97□□□□□ -0.97
MRPL40-202ENST00000443660 SDHAF1A6NFY7 115 aa8.96□□□□□ -0.98
MRPL40-202ENST00000443660 UMAD1C9J7I0 102 aa8.96□□□□□ -0.98
MRPL40-202ENST00000443660 I3L3M4 83 aa8.96□□□□□ -0.98
MRPL40-202ENST00000443660 LCE2AQ5TA79 106 aaPredicted RBP8.96□□□□□ -0.98
MRPL40-202ENST00000443660 SMIM15Q7Z3B0 74 aa8.96□□□□□ -0.98
MRPL40-202ENST00000443660 RPL39LQ96EH5 51 aaKnown RBP8.96□□□□□ -0.98
MRPL40-202ENST00000443660 COX7A2LO14548 114 aa8.95□□□□□ -0.98
MRPL40-202ENST00000443660 H2AFB1P0C5Y9 115 aa8.95□□□□□ -0.98
MRPL40-202ENST00000443660 RPL13AP40429 203 aaKnown RBP8.95□□□□□ -0.98
MRPL40-202ENST00000443660 GNG4P50150 75 aa8.95□□□□□ -0.98
MRPL40-202ENST00000443660 BIN3Q9NQY0 253 aa8.95□□□□□ -0.98
MRPL40-202ENST00000443660 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.94□□□□□ -0.98
MRPL40-202ENST00000443660 ARPC5O15511 151 aa8.94□□□□□ -0.98
MRPL40-202ENST00000443660 MEF2BQ02080 365 aaPredicted RBP8.94□□□□□ -0.98
MRPL40-202ENST00000443660 SMIM12Q96EX1 92 aa8.94□□□□□ -0.98
MRPL40-202ENST00000443660 MRAP2Q96G30 205 aa8.94□□□□□ -0.98
MRPL40-202ENST00000443660 C2orf48Q96LS8 159 aa8.94□□□□□ -0.98
MRPL40-202ENST00000443660 CDC42SE2Q9NRR3 84 aa8.94□□□□□ -0.98
MRPL40-202ENST00000443660 C1orf196B1AJZ1 125 aa8.93□□□□□ -0.98
MRPL40-202ENST00000443660 CTRLP40313 264 aa8.93□□□□□ -0.98
MRPL40-202ENST00000443660 C11orf52Q96A22 123 aa8.93□□□□□ -0.98
MRPL40-202ENST00000443660 FAM210AQ96ND0 272 aa8.93□□□□□ -0.98
MRPL40-202ENST00000443660 OPRPNQ99935 248 aaPredicted RBP8.93□□□□□ -0.98
MRPL40-202ENST00000443660 RAB19A4D1S5 217 aa8.92□□□□□ -0.98
MRPL40-202ENST00000443660 BCL2L11O43521 198 aa8.92□□□□□ -0.98
MRPL40-202ENST00000443660 ESDP10768 282 aa8.92□□□□□ -0.98
MRPL40-202ENST00000443660 CCL20P78556 96 aa8.92□□□□□ -0.98
MRPL40-202ENST00000443660 CNFNQ9BYD5 112 aa8.92□□□□□ -0.98
MRPL40-202ENST00000443660 MANBALQ9NQG1 85 aa8.92□□□□□ -0.98
MRPL40-202ENST00000443660 GNG13Q9P2W3 67 aa8.92□□□□□ -0.98
MRPL40-202ENST00000443660 KRTAP1-4P0C5Y4 121 aa8.91□□□□□ -0.98
MRPL40-202ENST00000443660 RNF151Q2KHN1 245 aa8.91□□□□□ -0.98
MRPL40-202ENST00000443660 MRPL52Q86TS9 123 aaKnown RBP8.91□□□□□ -0.98
MRPL40-202ENST00000443660 NUDT10Q8NFP7 164 aa8.9□□□□□ -0.98
MRPL40-202ENST00000443660 NUDT11Q96G61 164 aa8.9□□□□□ -0.98
MRPL40-202ENST00000443660 TRBV6-5A0A0K0K1A5 114 aa8.89□□□□□ -0.99
MRPL40-202ENST00000443660 IMMP2LQ96T52 175 aa8.89□□□□□ -0.99
MRPL40-202ENST00000443660 ST20Q9HBF5 79 aa8.89□□□□□ -0.99
MRPL40-202ENST00000443660 CARHSP1Q9Y2V2 147 aaKnown RBP8.89□□□□□ -0.99
MRPL40-202ENST00000443660 G3V3Q6 166 aa8.88□□□□□ -0.99
MRPL40-202ENST00000443660 TSPAN13O95857 204 aa8.88□□□□□ -0.99
MRPL40-202ENST00000443660 TSHBP01222 138 aa8.88□□□□□ -0.99
MRPL40-202ENST00000443660 FOXA3P55318 350 aaPredicted RBP8.88□□□□□ -0.99
MRPL40-202ENST00000443660 C5orf38Q86SI9 138 aa8.88□□□□□ -0.99
MRPL40-202ENST00000443660 TMEM242Q9NWH2 141 aa8.88□□□□□ -0.99
MRPL40-202ENST00000443660 SPAG11BQ08648 103 aa8.87□□□□□ -0.99
MRPL40-202ENST00000443660 SMAGPQ0VAQ4 97 aa8.87□□□□□ -0.99
MRPL40-202ENST00000443660 KRTAP11-1Q8IUC1 163 aa8.87□□□□□ -0.99
MRPL40-202ENST00000443660 RPP21Q9H633 154 aaKnown RBP8.87□□□□□ -0.99
MRPL40-202ENST00000443660 MED9Q9NWA0 146 aa8.87□□□□□ -0.99
MRPL40-202ENST00000443660 TRAV13-1A0A0B4J241 112 aa8.86□□□□□ -0.99
MRPL40-202ENST00000443660 FAM168BA1KXE4 195 aa8.86□□□□□ -0.99
MRPL40-202ENST00000443660 C7orf77A4D0Y5 90 aa8.86□□□□□ -0.99
MRPL40-202ENST00000443660 PDE6DO43924 150 aa8.86□□□□□ -0.99
MRPL40-202ENST00000443660 UBE2BP63146 152 aa8.86□□□□□ -0.99
MRPL40-202ENST00000443660 FAM19A5Q7Z5A7 132 aaPredicted RBP8.86□□□□□ -0.99
MRPL40-202ENST00000443660 MRPL35Q9NZE8 188 aaKnown RBP8.86□□□□□ -0.99
MRPL40-202ENST00000443660 F8WDY8 70 aa8.85□□□□□ -0.99
MRPL40-202ENST00000443660 TEX46H3BTG2 121 aa8.85□□□□□ -0.99
MRPL40-202ENST00000443660 OR10D4PQ8NGN7 298 aa8.85□□□□□ -0.99
MRPL40-202ENST00000443660 TRBV20OR9-2A0A075B6H5 130 aa8.84□□□□□ -0.99
MRPL40-202ENST00000443660 TMEM241Q24JQ0 296 aa8.84□□□□□ -0.99
MRPL40-202ENST00000443660 RNASE7Q9H1E1 156 aaKnown RBP8.84□□□□□ -0.99
MRPL40-202ENST00000443660 CSDC2Q9Y534 153 aaKnown RBP8.84□□□□□ -0.99
MRPL40-202ENST00000443660 TRBV27A0A0K0K1C4 114 aa8.83□□□□□ -1
MRPL40-202ENST00000443660 FCER1GP30273 86 aa8.83□□□□□ -1
MRPL40-202ENST00000443660 POLR2KP53803 58 aaKnown RBP8.83□□□□□ -1
MRPL40-202ENST00000443660 ZNF345Q14585 488 aa8.83□□□□□ -1
MRPL40-202ENST00000443660 KANTRA0A1W2PQU2 76 aa8.82□□□□□ -1
MRPL40-202ENST00000443660 NDUFA1O15239 70 aa8.82□□□□□ -1
MRPL40-202ENST00000443660 GAGE2EQ4V326 116 aa8.82□□□□□ -1
MRPL40-202ENST00000443660 RNASE13Q5GAN3 156 aaKnown RBP8.82□□□□□ -1
MRPL40-202ENST00000443660 GAGE2DQ9UEU5 116 aa8.82□□□□□ -1
MRPL40-202ENST00000443660 M0QXV9 152 aa8.81□□□□□ -1
MRPL40-202ENST00000443660 VCYO14598 125 aa8.81□□□□□ -1
MRPL40-202ENST00000443660 TLX1NBP0CAT3 122 aa8.81□□□□□ -1
MRPL40-202ENST00000443660 ORAOV1Q8WV07 137 aa8.81□□□□□ -1
MRPL40-202ENST00000443660 BORCS7Q96B45 105 aa8.81□□□□□ -1
MRPL40-202ENST00000443660 UBE2D4Q9Y2X8 147 aa8.8□□□□□ -1
MRPL40-202ENST00000443660 SMLR1H3BR10 107 aa8.79□□□□□ -1
MRPL40-202ENST00000443660 ZNF861PO60384 105 aa8.79□□□□□ -1
MRPL40-202ENST00000443660 UNQ6190/PRO20217Q6UXQ8 127 aa8.79□□□□□ -1
MRPL40-202ENST00000443660 OCC1Q8TAD7 63 aa8.79□□□□□ -1
MRPL40-202ENST00000443660 A8MWL6 223 aa8.78□□□□□ -1
MRPL40-202ENST00000443660 GATCO43716 136 aaKnown RBP8.78□□□□□ -1
MRPL40-202ENST00000443660 C10orf25Q5T742 122 aa8.78□□□□□ -1
MRPL40-202ENST00000443660 TMEM18Q96B42 140 aa8.78□□□□□ -1
MRPL40-202ENST00000443660 KIR2DL4Q99706 377 aa8.78□□□□□ -1
MRPL40-202ENST00000443660 SMDT1Q9H4I9 107 aa8.78□□□□□ -1
MRPL40-202ENST00000443660 K7EN84 100 aa8.77□□□□□ -1.01
MRPL40-202ENST00000443660 C6orf48Q9UBA6 75 aa8.77□□□□□ -1.01
MRPL40-202ENST00000443660 HMSDA8MTL9 139 aa8.76□□□□□ -1.01
MRPL40-202ENST00000443660 PPP1R17O96001 155 aa8.76□□□□□ -1.01
MRPL40-202ENST00000443660 RAB4AP20338 218 aa8.76□□□□□ -1.01
MRPL40-202ENST00000443660 Q6ZUT4 128 aa8.76□□□□□ -1.01
MRPL40-202ENST00000443660 KRTAP7-1Q8IUC3 87 aa8.76□□□□□ -1.01
MRPL40-202ENST00000443660 TYMSOSQ8TAI1 123 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms