RNA–Protein interactions for RNA: ENST00000428098.5

DDX39B-208, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-208ENST00000428098 CCDC160A6NGH7 325 aa6.75□□□□□ -1.33
DDX39B-208ENST00000428098 INMT-MINDY4F8WBC2 141 aa6.75□□□□□ -1.33
DDX39B-208ENST00000428098 NCR2O95944 276 aa6.75□□□□□ -1.33
DDX39B-208ENST00000428098 MBP02144 154 aa6.75□□□□□ -1.33
DDX39B-208ENST00000428098 SERF2P84101 59 aa6.75□□□□□ -1.33
DDX39B-208ENST00000428098 LINC00337Q8N6G1 96 aa6.75□□□□□ -1.33
DDX39B-208ENST00000428098 MRPL35Q9NZE8 188 aaKnown RBP6.75□□□□□ -1.33
DDX39B-208ENST00000428098 FCGBPQ9Y6R7 5405 aaPredicted RBP6.75□□□□□ -1.33
DDX39B-208ENST00000428098 G3V3Q6 166 aa6.74□□□□□ -1.33
DDX39B-208ENST00000428098 APCSP02743 223 aa6.74□□□□□ -1.33
DDX39B-208ENST00000428098 TLX1NBP0CAT3 122 aa6.74□□□□□ -1.33
DDX39B-208ENST00000428098 DEFA1P59665 94 aa6.74□□□□□ -1.33
DDX39B-208ENST00000428098 C5orf38Q86SI9 138 aa6.74□□□□□ -1.33
DDX39B-208ENST00000428098 RPL39LQ96EH5 51 aaKnown RBP6.74□□□□□ -1.33
DDX39B-208ENST00000428098 TMEM101Q96IK0 257 aa6.74□□□□□ -1.33
DDX39B-208ENST00000428098 BTF3L4Q96K17 158 aa6.74□□□□□ -1.33
DDX39B-208ENST00000428098 AKR1C3P42330 323 aa6.73□□□□□ -1.33
DDX39B-208ENST00000428098 SEC61BP60468 96 aaKnown RBP6.73□□□□□ -1.33
DDX39B-208ENST00000428098 LINC00242Q5T6M2 205 aa6.73□□□□□ -1.33
DDX39B-208ENST00000428098 MZT2BQ6NZ67 158 aa6.73□□□□□ -1.33
DDX39B-208ENST00000428098 UNQ6190/PRO20217Q6UXQ8 127 aa6.73□□□□□ -1.33
DDX39B-208ENST00000428098 BAGE2Q86Y30 109 aa6.73□□□□□ -1.33
DDX39B-208ENST00000428098 OR2D3Q8NGH3 330 aa6.73□□□□□ -1.33
DDX39B-208ENST00000428098 IMMP2LQ96T52 175 aa6.73□□□□□ -1.33
DDX39B-208ENST00000428098 CTDSP1Q9GZU7 261 aa6.73□□□□□ -1.33
DDX39B-208ENST00000428098 SPAG11BQ08648 103 aa6.72□□□□□ -1.33
DDX39B-208ENST00000428098 C6orf48Q9UBA6 75 aa6.72□□□□□ -1.33
DDX39B-208ENST00000428098 CTXND1A0A1B0GTU2 59 aa6.71□□□□□ -1.34
DDX39B-208ENST00000428098 FAM240BA0A1B0GVZ2 78 aa6.71□□□□□ -1.34
DDX39B-208ENST00000428098 C1orf196B1AJZ1 125 aa6.71□□□□□ -1.34
DDX39B-208ENST00000428098 C9orf129Q5T035 196 aaKnown RBP6.71□□□□□ -1.34
DDX39B-208ENST00000428098 CST9LP1Q5W188 147 aa6.71□□□□□ -1.34
DDX39B-208ENST00000428098 SMDT1Q9H4I9 107 aa6.71□□□□□ -1.34
DDX39B-208ENST00000428098 FHITP49789 147 aa6.7□□□□□ -1.34
DDX39B-208ENST00000428098 MRPL52Q86TS9 123 aaKnown RBP6.7□□□□□ -1.34
DDX39B-208ENST00000428098 SDHAF1A6NFY7 115 aa6.69□□□□□ -1.34
DDX39B-208ENST00000428098 TRGC1P0CF51 173 aa6.69□□□□□ -1.34
DDX39B-208ENST00000428098 PET100P0DJ07 73 aa6.69□□□□□ -1.34
DDX39B-208ENST00000428098 LYZL1Q6UWQ5 148 aa6.69□□□□□ -1.34
DDX39B-208ENST00000428098 STOML3Q8TAV4 291 aa6.69□□□□□ -1.34
DDX39B-208ENST00000428098 SYNE2Q8WXH0 6885 aaKnown RBP6.69□□□□□ -1.34
DDX39B-208ENST00000428098 TMEM241Q24JQ0 296 aa6.68□□□□□ -1.34
DDX39B-208ENST00000428098 RNASE13Q5GAN3 156 aaKnown RBP6.68□□□□□ -1.34
DDX39B-208ENST00000428098 TCEAL7Q9BRU2 100 aa6.68□□□□□ -1.34
DDX39B-208ENST00000428098 ALG5Q9Y673 324 aa6.68□□□□□ -1.34
DDX39B-208ENST00000428098 TRAV13-1A0A0B4J241 112 aa6.67□□□□□ -1.34
DDX39B-208ENST00000428098 SCO2A0A1W2PP80 73 aa6.67□□□□□ -1.34
DDX39B-208ENST00000428098 I3L3M4 83 aa6.67□□□□□ -1.34
DDX39B-208ENST00000428098 NDUFA1O15239 70 aa6.67□□□□□ -1.34
DDX39B-208ENST00000428098 NUPR1O60356 82 aa6.67□□□□□ -1.34
DDX39B-208ENST00000428098 PAGE4O60829 102 aa6.67□□□□□ -1.34
DDX39B-208ENST00000428098 S100A9P06702 114 aaKnown RBP6.67□□□□□ -1.34
DDX39B-208ENST00000428098 PMCHP20382 165 aa6.67□□□□□ -1.34
DDX39B-208ENST00000428098 RPL28P46779 137 aaKnown RBP6.67□□□□□ -1.34
DDX39B-208ENST00000428098 FOXA3P55318 350 aaPredicted RBP6.67□□□□□ -1.34
DDX39B-208ENST00000428098 CTAG1AP78358 180 aa6.67□□□□□ -1.34
DDX39B-208ENST00000428098 OR10D4PQ8NGN7 298 aa6.67□□□□□ -1.34
DDX39B-208ENST00000428098 F2Z2F3 143 aa6.66□□□□□ -1.34
DDX39B-208ENST00000428098 FP248Q71RG6 208 aaPredicted RBP6.66□□□□□ -1.34
DDX39B-208ENST00000428098 ORAOV1Q8WV07 137 aa6.66□□□□□ -1.34
DDX39B-208ENST00000428098 RNASE7Q9H1E1 156 aaKnown RBP6.66□□□□□ -1.34
DDX39B-208ENST00000428098 C22orf24Q9Y442 160 aa6.66□□□□□ -1.34
DDX39B-208ENST00000428098 MAP1LC3B2A6NCE7 125 aa6.65□□□□□ -1.34
DDX39B-208ENST00000428098 F8WDY8 70 aa6.65□□□□□ -1.34
DDX39B-208ENST00000428098 BCE1O60756 84 aa6.65□□□□□ -1.34
DDX39B-208ENST00000428098 FAM229BQ4G0N7 80 aa6.65□□□□□ -1.34
DDX39B-208ENST00000428098 TMUB2Q71RG4 321 aa6.65□□□□□ -1.34
DDX39B-208ENST00000428098 C9orf62Q8N4C0 152 aa6.65□□□□□ -1.34
DDX39B-208ENST00000428098 MRAP2Q96G30 205 aa6.65□□□□□ -1.34
DDX39B-208ENST00000428098 MAP1LC3BQ9GZQ8 125 aa6.65□□□□□ -1.34
DDX39B-208ENST00000428098 TMEM242Q9NWH2 141 aa6.65□□□□□ -1.34
DDX39B-208ENST00000428098 A6NJY4 79 aa6.64□□□□□ -1.35
DDX39B-208ENST00000428098 CTRLP40313 264 aa6.64□□□□□ -1.35
DDX39B-208ENST00000428098 RPS20P60866 119 aaKnown RBP6.64□□□□□ -1.35
DDX39B-208ENST00000428098 RPL7L1Q6DKI1 246 aaKnown RBP6.64□□□□□ -1.35
DDX39B-208ENST00000428098 CCDC32Q9BV29 185 aa6.64□□□□□ -1.35
DDX39B-208ENST00000428098 IGKV2D-26A0A0A0MRZ7 120 aa6.63□□□□□ -1.35
DDX39B-208ENST00000428098 KIAA0087Q14695 138 aa6.63□□□□□ -1.35
DDX39B-208ENST00000428098 TWIST1Q15672 202 aa6.63□□□□□ -1.35
DDX39B-208ENST00000428098 IGHV3OR16-9A0A0B4J2B5 98 aa6.62□□□□□ -1.35
DDX39B-208ENST00000428098 TRBV6-5A0A0K0K1A5 114 aa6.62□□□□□ -1.35
DDX39B-208ENST00000428098 KRTAP13-1Q8IUC0 172 aa6.62□□□□□ -1.35
DDX39B-208ENST00000428098 CYTL1Q9NRR1 136 aa6.62□□□□□ -1.35
DDX39B-208ENST00000428098 MACF1Q9UPN3 7388 aaKnown RBP6.62□□□□□ -1.35
DDX39B-208ENST00000428098 NDUFC2-KCTD14E9PQ53 114 aa6.61□□□□□ -1.35
DDX39B-208ENST00000428098 IFNA1P01562 189 aa6.61□□□□□ -1.35
DDX39B-208ENST00000428098 RPL35P42766 123 aaKnown RBP6.61□□□□□ -1.35
DDX39B-208ENST00000428098 C2orf82Q6UX34 121 aa6.61□□□□□ -1.35
DDX39B-208ENST00000428098 C3orf22Q8N5N4 141 aa6.61□□□□□ -1.35
DDX39B-208ENST00000428098 UBE2D4Q9Y2X8 147 aa6.61□□□□□ -1.35
DDX39B-208ENST00000428098 M0R2T5 61 aa6.6□□□□□ -1.35
DDX39B-208ENST00000428098 SSNA1O43805 119 aa6.6□□□□□ -1.35
DDX39B-208ENST00000428098 POLR2KP53803 58 aaKnown RBP6.6□□□□□ -1.35
DDX39B-208ENST00000428098 FAM104AQ969W3 186 aa6.6□□□□□ -1.35
DDX39B-208ENST00000428098 CNFNQ9BYD5 112 aa6.6□□□□□ -1.35
DDX39B-208ENST00000428098 CSDC2Q9Y534 153 aaKnown RBP6.6□□□□□ -1.35
DDX39B-208ENST00000428098 FLGP20930 4061 aaPredicted RBP6.59□□□□□ -1.35
DDX39B-208ENST00000428098 C7orf77A4D0Y5 90 aa6.59□□□□□ -1.35
DDX39B-208ENST00000428098 LBHQ53QV2 105 aaPredicted RBP6.59□□□□□ -1.35
DDX39B-208ENST00000428098 AKR1C8PQ5T2L2 129 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms