RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 HNRNPA3P51991 378 aaKnown RBP10.62□□□□□ -0.71
ACTB-204ENST00000425660 SMAGPQ0VAQ4 97 aa10.62□□□□□ -0.71
ACTB-204ENST00000425660 TMEM243Q9BU79 118 aa10.62□□□□□ -0.71
ACTB-204ENST00000425660 Q6ZUT4 128 aa10.61□□□□□ -0.71
ACTB-204ENST00000425660 ATP6V0E2Q8NHE4 81 aa10.61□□□□□ -0.71
ACTB-204ENST00000425660 TP73-AS1Q9UF72 201 aa10.61□□□□□ -0.71
ACTB-204ENST00000425660 PRB2P02812 416 aaPredicted RBP10.61□□□□□ -0.71
ACTB-204ENST00000425660 NMUP48645 174 aa10.61□□□□□ -0.71
ACTB-204ENST00000425660 C12orf74Q32Q52 190 aa10.61□□□□□ -0.71
ACTB-204ENST00000425660 TRAV26-1A0A087WT03 109 aa10.59□□□□□ -0.71
ACTB-204ENST00000425660 E9PLD3 99 aa10.59□□□□□ -0.71
ACTB-204ENST00000425660 TCTAP57738 103 aa10.59□□□□□ -0.71
ACTB-204ENST00000425660 CTAG1AP78358 180 aa10.59□□□□□ -0.71
ACTB-204ENST00000425660 DGAT2L7PQ6IED9 249 aa10.59□□□□□ -0.71
ACTB-204ENST00000425660 PCP2Q8IVA1 136 aa10.59□□□□□ -0.71
ACTB-204ENST00000425660 TM2D3Q9BRN9 247 aa10.59□□□□□ -0.71
ACTB-204ENST00000425660 CHAC1Q9BUX1 264 aa10.59□□□□□ -0.71
ACTB-204ENST00000425660 F5H768 121 aa10.58□□□□□ -0.72
ACTB-204ENST00000425660 ZNF25P17030 456 aaPredicted RBP10.58□□□□□ -0.72
ACTB-204ENST00000425660 C2orf88Q9BSF0 95 aa10.58□□□□□ -0.72
ACTB-204ENST00000425660 TENM3Q9P273 2699 aa10.58□□□□□ -0.72
ACTB-204ENST00000425660 UBE2L6O14933 153 aa10.58□□□□□ -0.72
ACTB-204ENST00000425660 RNASE13Q5GAN3 156 aaKnown RBP10.58□□□□□ -0.72
ACTB-204ENST00000425660 SPATA25Q9BR10 227 aa10.58□□□□□ -0.72
ACTB-204ENST00000425660 CDC42SE2Q9NRR3 84 aa10.58□□□□□ -0.72
ACTB-204ENST00000425660 A0A0J9YXV3 536 aa10.57□□□□□ -0.72
ACTB-204ENST00000425660 A0A0J9YY99 117 aa10.57□□□□□ -0.72
ACTB-204ENST00000425660 SIVA1O15304 175 aa10.57□□□□□ -0.72
ACTB-204ENST00000425660 UBE2D1P51668 147 aa10.57□□□□□ -0.72
ACTB-204ENST00000425660 C2orf91Q6ZV80 131 aa10.57□□□□□ -0.72
ACTB-204ENST00000425660 SNHG12Q9BXW3 62 aa10.57□□□□□ -0.72
ACTB-204ENST00000425660 TINCRA0A1B0GVN0 87 aa10.56□□□□□ -0.72
ACTB-204ENST00000425660 OR5A1Q8NGJ0 315 aa10.56□□□□□ -0.72
ACTB-204ENST00000425660 A0A0J9YWU9 116 aa10.56□□□□□ -0.72
ACTB-204ENST00000425660 M0R143 59 aa10.56□□□□□ -0.72
ACTB-204ENST00000425660 ZNF22P17026 224 aaPredicted RBP10.56□□□□□ -0.72
ACTB-204ENST00000425660 TMEM170BQ5T4T1 132 aa10.56□□□□□ -0.72
ACTB-204ENST00000425660 AMMECR1LQ6DCA0 310 aa10.56□□□□□ -0.72
ACTB-204ENST00000425660 FAM19A3Q7Z5A8 133 aa10.56□□□□□ -0.72
ACTB-204ENST00000425660 H3BNG1 76 aa10.55□□□□□ -0.72
ACTB-204ENST00000425660 HERVK_113P61574 105 aa10.55□□□□□ -0.72
ACTB-204ENST00000425660 MRPL23Q16540 153 aaKnown RBP10.55□□□□□ -0.72
ACTB-204ENST00000425660 LBHQ53QV2 105 aaPredicted RBP10.55□□□□□ -0.72
ACTB-204ENST00000425660 SH2D6Q7Z4S9 175 aa10.55□□□□□ -0.72
ACTB-204ENST00000425660 TMEM101Q96IK0 257 aa10.55□□□□□ -0.72
ACTB-204ENST00000425660 TMEM223A0PJW6 202 aa10.54□□□□□ -0.72
ACTB-204ENST00000425660 EREGO14944 169 aa10.54□□□□□ -0.72
ACTB-204ENST00000425660 HTN3P15516 51 aa10.54□□□□□ -0.72
ACTB-204ENST00000425660 TTTY13Q9BZ97 58 aa10.54□□□□□ -0.72
ACTB-204ENST00000425660 DEFB121Q5J5C9 76 aa10.54□□□□□ -0.72
ACTB-204ENST00000425660 Q6ZTC4 211 aa10.54□□□□□ -0.72
ACTB-204ENST00000425660 CHCHD5Q9BSY4 110 aa10.54□□□□□ -0.72
ACTB-204ENST00000425660 IGLV5-45A0A087WSX0 123 aa10.53□□□□□ -0.72
ACTB-204ENST00000425660 TRAV8-6A0A0B4J262 113 aa10.53□□□□□ -0.72
ACTB-204ENST00000425660 TIRAPP58753 221 aa10.53□□□□□ -0.72
ACTB-204ENST00000425660 GAGE6Q13070 117 aa10.53□□□□□ -0.72
ACTB-204ENST00000425660 ICOSQ9Y6W8 199 aa10.53□□□□□ -0.72
ACTB-204ENST00000425660 HUWE1Q7Z6Z7 4374 aaKnown RBP10.52□□□□□ -0.73
ACTB-204ENST00000425660 A0A096LPF7 62 aa10.52□□□□□ -0.73
ACTB-204ENST00000425660 A0A1B0GUV1 79 aa10.52□□□□□ -0.73
ACTB-204ENST00000425660 MAPKAPK5-AS1Q8N8E1 139 aa10.52□□□□□ -0.73
ACTB-204ENST00000425660 SEC11AP67812 179 aa10.51□□□□□ -0.73
ACTB-204ENST00000425660 LINC00242Q5T6M2 205 aa10.51□□□□□ -0.73
ACTB-204ENST00000425660 C11orf45Q8TAV5 145 aa10.51□□□□□ -0.73
ACTB-204ENST00000425660 HIGD1BQ9P298 99 aa10.51□□□□□ -0.73
ACTB-204ENST00000425660 IGLV4-60A0A075B6I1 120 aa10.51□□□□□ -0.73
ACTB-204ENST00000425660 MYMXA0A1B0GTQ4 84 aa10.5□□□□□ -0.73
ACTB-204ENST00000425660 HERVK_113P63121 156 aa10.5□□□□□ -0.73
ACTB-204ENST00000425660 MRAPQ8TCY5 172 aa10.5□□□□□ -0.73
ACTB-204ENST00000425660 MPV17L2Q567V2 206 aa10.49□□□□□ -0.73
ACTB-204ENST00000425660 GEMIN7Q9H840 131 aaKnown RBP10.49□□□□□ -0.73
ACTB-204ENST00000425660 LEPROTO15243 131 aa10.49□□□□□ -0.73
ACTB-204ENST00000425660 TRAV13-1A0A0B4J241 112 aa10.48□□□□□ -0.73
ACTB-204ENST00000425660 J3QQQ9 107 aa10.48□□□□□ -0.73
ACTB-204ENST00000425660 TSPEAR-AS2P59090 65 aa10.48□□□□□ -0.73
ACTB-204ENST00000425660 NANOS2P60321 138 aaKnown RBP10.48□□□□□ -0.73
ACTB-204ENST00000425660 RBX1P62877 108 aa10.48□□□□□ -0.73
ACTB-204ENST00000425660 LELP1Q5T871 98 aa10.48□□□□□ -0.73
ACTB-204ENST00000425660 LINC00469Q8N7U9 141 aa10.48□□□□□ -0.73
ACTB-204ENST00000425660 CDKN2A-AS1Q9UH64 79 aa10.48□□□□□ -0.73
ACTB-204ENST00000425660 HINT1P49773 126 aaPredicted RBP10.47□□□□□ -0.73
ACTB-204ENST00000425660 COX6A2Q02221 97 aa10.47□□□□□ -0.73
ACTB-204ENST00000425660 IGHV1-58A0A0C4DH39 117 aa10.47□□□□□ -0.73
ACTB-204ENST00000425660 ZNF815PA8K554 130 aa10.47□□□□□ -0.73
ACTB-204ENST00000425660 BVES-AS1Q5T3Y7 98 aa10.47□□□□□ -0.73
ACTB-204ENST00000425660 DEFB131BA0A096LNP1 70 aa10.46□□□□□ -0.74
ACTB-204ENST00000425660 TMEM262E9PQX1 116 aa10.46□□□□□ -0.74
ACTB-204ENST00000425660 H3BRM9 83 aa10.46□□□□□ -0.74
ACTB-204ENST00000425660 IGHV3-30-3P0DP02 117 aa10.46□□□□□ -0.74
ACTB-204ENST00000425660 HSD52Q0P140 79 aa10.46□□□□□ -0.74
ACTB-204ENST00000425660 PLEKHB2Q96CS7 222 aa10.46□□□□□ -0.74
ACTB-204ENST00000425660 BATFQ16520 125 aa10.45□□□□□ -0.74
ACTB-204ENST00000425660 LYPD5Q6UWN5 251 aa10.45□□□□□ -0.74
ACTB-204ENST00000425660 LGALS3P17931 250 aaKnown RBP10.44□□□□□ -0.74
ACTB-204ENST00000425660 TRAV8-3A0A0A6YYJ7 113 aa10.44□□□□□ -0.74
ACTB-204ENST00000425660 DNAH9Q9NYC9 4486 aa10.44□□□□□ -0.74
ACTB-204ENST00000425660 IGHV3-64A0A075B6Q5 118 aa10.43□□□□□ -0.74
ACTB-204ENST00000425660 IGLV5-39A0A0G2JS06 123 aa10.43□□□□□ -0.74
ACTB-204ENST00000425660 COL5A1-AS1Q5SY13 56 aa10.43□□□□□ -0.74
ACTB-204ENST00000425660 B9D2Q9BPU9 175 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms