RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 LINC00862A6NCI5 91 aa1.28□□□□□ -2.2
RNU6-1140P-201ENST00000410517 CEBPZOSA8MTT3 80 aa1.28□□□□□ -2.2
RNU6-1140P-201ENST00000410517 M0R129 80 aa1.28□□□□□ -2.2
RNU6-1140P-201ENST00000410517 M0R2Z0 102 aa1.28□□□□□ -2.2
RNU6-1140P-201ENST00000410517 HYPMO75409 117 aa1.28□□□□□ -2.2
RNU6-1140P-201ENST00000410517 IFNA7P01567 189 aa1.28□□□□□ -2.2
RNU6-1140P-201ENST00000410517 CRPP02741 224 aa1.28□□□□□ -2.2
RNU6-1140P-201ENST00000410517 SULT1A3P0DMM9 295 aa1.28□□□□□ -2.2
RNU6-1140P-201ENST00000410517 SULT1A4P0DMN0 295 aa1.28□□□□□ -2.2
RNU6-1140P-201ENST00000410517 IGHV3-30-3P0DP02 117 aa1.28□□□□□ -2.2
RNU6-1140P-201ENST00000410517 SLC25A6P12236 298 aa1.28□□□□□ -2.2
RNU6-1140P-201ENST00000410517 CXCL3P19876 107 aa1.28□□□□□ -2.2
RNU6-1140P-201ENST00000410517 FXYD4P59646 89 aa1.28□□□□□ -2.2
RNU6-1140P-201ENST00000410517 MRPS10P82664 201 aaKnown RBP1.28□□□□□ -2.2
RNU6-1140P-201ENST00000410517 HIST1H1AQ02539 215 aaPredicted RBP1.28□□□□□ -2.2
RNU6-1140P-201ENST00000410517 SSBP1Q04837 148 aaKnown RBP1.28□□□□□ -2.2
RNU6-1140P-201ENST00000410517 MIAQ16674 131 aa1.28□□□□□ -2.2
RNU6-1140P-201ENST00000410517 NMSQ5H8A3 153 aa1.28□□□□□ -2.2
RNU6-1140P-201ENST00000410517 TMEM78Q5T7P6 136 aa1.28□□□□□ -2.2
RNU6-1140P-201ENST00000410517 XAF1Q6GPH4 301 aa1.28□□□□□ -2.2
RNU6-1140P-201ENST00000410517 SELENOHQ8IZQ5 122 aaKnown RBP1.28□□□□□ -2.2
RNU6-1140P-201ENST00000410517 OR10P1Q8NGE3 313 aa1.28□□□□□ -2.2
RNU6-1140P-201ENST00000410517 OR13C8Q8NGS7 320 aa1.28□□□□□ -2.2
RNU6-1140P-201ENST00000410517 GPR146Q96CH1 333 aa1.28□□□□□ -2.2
RNU6-1140P-201ENST00000410517 DPH3Q96FX2 82 aa1.28□□□□□ -2.2
RNU6-1140P-201ENST00000410517 ACY3Q96HD9 319 aa1.28□□□□□ -2.2
RNU6-1140P-201ENST00000410517 GGACTQ9BVM4 153 aa1.28□□□□□ -2.2
RNU6-1140P-201ENST00000410517 FAM107BQ9H098 131 aa1.28□□□□□ -2.2
RNU6-1140P-201ENST00000410517 VCX3BQ9H321 246 aa1.28□□□□□ -2.2
RNU6-1140P-201ENST00000410517 FKBP14Q9NWM8 211 aa1.28□□□□□ -2.2
RNU6-1140P-201ENST00000410517 HIGD1AQ9Y241 93 aa1.28□□□□□ -2.2
RNU6-1140P-201ENST00000410517 IGHV3-64A0A075B6Q5 118 aa1.27□□□□□ -2.21
RNU6-1140P-201ENST00000410517 PNMA8CA0A1B0GUJ8 204 aa1.27□□□□□ -2.21
RNU6-1140P-201ENST00000410517 C7orf71A4D174 169 aa1.27□□□□□ -2.21
RNU6-1140P-201ENST00000410517 RBAKDNA6NC62 111 aa1.27□□□□□ -2.21
RNU6-1140P-201ENST00000410517 TMEM235A6NFC5 223 aa1.27□□□□□ -2.21
RNU6-1140P-201ENST00000410517 M0R2P5 195 aa1.27□□□□□ -2.21
RNU6-1140P-201ENST00000410517 ZNF73O43830 326 aaPredicted RBP1.27□□□□□ -2.21
RNU6-1140P-201ENST00000410517 IL5P05113 134 aa1.27□□□□□ -2.21
RNU6-1140P-201ENST00000410517 GPX1P07203 203 aa1.27□□□□□ -2.21
RNU6-1140P-201ENST00000410517 MT1HL1P0DM35 61 aa1.27□□□□□ -2.21
RNU6-1140P-201ENST00000410517 ORM2P19652 201 aa1.27□□□□□ -2.21
RNU6-1140P-201ENST00000410517 CSN1S1P47710 185 aa1.27□□□□□ -2.21
RNU6-1140P-201ENST00000410517 PIGPP57054 158 aa1.27□□□□□ -2.21
RNU6-1140P-201ENST00000410517 KRTAP10-4P60372 401 aaPredicted RBP1.27□□□□□ -2.21
RNU6-1140P-201ENST00000410517 CNBPP62633 177 aaKnown RBP1.27□□□□□ -2.21
RNU6-1140P-201ENST00000410517 CIRBPQ14011 172 aaKnown RBP1.27□□□□□ -2.21
RNU6-1140P-201ENST00000410517 FAM74A1Q5RGS3 127 aa1.27□□□□□ -2.21
RNU6-1140P-201ENST00000410517 GDF5OSQ5U4N7 250 aa1.27□□□□□ -2.21
RNU6-1140P-201ENST00000410517 DPPA3Q6W0C5 159 aa1.27□□□□□ -2.21
RNU6-1140P-201ENST00000410517 Q6ZTI0 123 aa1.27□□□□□ -2.21
RNU6-1140P-201ENST00000410517 SLC51BQ86UW2 128 aa1.27□□□□□ -2.21
RNU6-1140P-201ENST00000410517 WFDC10BQ8IUB3 73 aa1.27□□□□□ -2.21
RNU6-1140P-201ENST00000410517 BAP18Q8IXM2 172 aa1.27□□□□□ -2.21
RNU6-1140P-201ENST00000410517 C9orf163Q8N9P6 203 aa1.27□□□□□ -2.21
RNU6-1140P-201ENST00000410517 LHFPL5Q8TAF8 219 aa1.27□□□□□ -2.21
RNU6-1140P-201ENST00000410517 ZNF431Q8TF32 576 aaPredicted RBP1.27□□□□□ -2.21
RNU6-1140P-201ENST00000410517 PTH2Q96A98 100 aa1.27□□□□□ -2.21
RNU6-1140P-201ENST00000410517 C20orf166-AS1Q96NR2 134 aa1.27□□□□□ -2.21
RNU6-1140P-201ENST00000410517 PRRT1Q99946 306 aa1.27□□□□□ -2.21
RNU6-1140P-201ENST00000410517 KRTAP4-1Q9BYQ7 146 aa1.27□□□□□ -2.21
RNU6-1140P-201ENST00000410517 TMEM222Q9H0R3 208 aa1.27□□□□□ -2.21
RNU6-1140P-201ENST00000410517 MED28Q9H204 178 aa1.27□□□□□ -2.21
RNU6-1140P-201ENST00000410517 NPVFQ9HCQ7 196 aa1.27□□□□□ -2.21
RNU6-1140P-201ENST00000410517 LYRM2Q9NU23 88 aaPredicted RBP1.27□□□□□ -2.21
RNU6-1140P-201ENST00000410517 NDUFB11Q9NX14 153 aa1.27□□□□□ -2.21
RNU6-1140P-201ENST00000410517 CRCT1Q9UGL9 99 aa1.27□□□□□ -2.21
RNU6-1140P-201ENST00000410517 CARHSP1Q9Y2V2 147 aaKnown RBP1.27□□□□□ -2.21
RNU6-1140P-201ENST00000410517 TRAV12-2A0A075B6T6 113 aa1.26□□□□□ -2.21
RNU6-1140P-201ENST00000410517 IGHV3-73A0A0B4J1V6 119 aa1.26□□□□□ -2.21
RNU6-1140P-201ENST00000410517 TRAV12-3A0A0B4J271 114 aa1.26□□□□□ -2.21
RNU6-1140P-201ENST00000410517 TRBV10-1A0A0K0K1A3 114 aa1.26□□□□□ -2.21
RNU6-1140P-201ENST00000410517 A0A1B0GVG6 124 aa1.26□□□□□ -2.21
RNU6-1140P-201ENST00000410517 A8MWV9 139 aa1.26□□□□□ -2.21
RNU6-1140P-201ENST00000410517 C8orf87E5RJ46 101 aa1.26□□□□□ -2.21
RNU6-1140P-201ENST00000410517 UBE2L6O14933 153 aa1.26□□□□□ -2.21
RNU6-1140P-201ENST00000410517 LECT2O14960 151 aa1.26□□□□□ -2.21
RNU6-1140P-201ENST00000410517 OR4E1P0C645 316 aa1.26□□□□□ -2.21
RNU6-1140P-201ENST00000410517 CDC34P49427 236 aaPredicted RBP1.26□□□□□ -2.21
RNU6-1140P-201ENST00000410517 CLDN12P56749 244 aa1.26□□□□□ -2.21
RNU6-1140P-201ENST00000410517 FXYD7P58549 80 aa1.26□□□□□ -2.21
RNU6-1140P-201ENST00000410517 GNGT1P63211 74 aa1.26□□□□□ -2.21
RNU6-1140P-201ENST00000410517 ZNF90Q03938 601 aa1.26□□□□□ -2.21
RNU6-1140P-201ENST00000410517 AKR1C1Q04828 323 aa1.26□□□□□ -2.21
RNU6-1140P-201ENST00000410517 SMCO1Q147U7 214 aa1.26□□□□□ -2.21
RNU6-1140P-201ENST00000410517 RNASE10Q5GAN6 216 aaKnown RBP1.26□□□□□ -2.21
RNU6-1140P-201ENST00000410517 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.26□□□□□ -2.21
RNU6-1140P-201ENST00000410517 TMEM91Q6ZNR0 172 aa1.26□□□□□ -2.21
RNU6-1140P-201ENST00000410517 FAM19A3Q7Z5A8 133 aa1.26□□□□□ -2.21
RNU6-1140P-201ENST00000410517 ZFAND2AQ8N6M9 145 aa1.26□□□□□ -2.21
RNU6-1140P-201ENST00000410517 MAFIPQ8WZ33 124 aa1.26□□□□□ -2.21
RNU6-1140P-201ENST00000410517 AP3S1Q92572 193 aa1.26□□□□□ -2.21
RNU6-1140P-201ENST00000410517 SCP2D1Q9UJQ7 156 aa1.26□□□□□ -2.21
RNU6-1140P-201ENST00000410517 ANAPC10Q9UM13 185 aa1.26□□□□□ -2.21
RNU6-1140P-201ENST00000410517 LSM2Q9Y333 95 aaKnown RBP1.26□□□□□ -2.21
RNU6-1140P-201ENST00000410517 IGKV1D-37A0A075B6S9 117 aa1.25□□□□□ -2.21
RNU6-1140P-201ENST00000410517 TRAV21A0A0B4J279 112 aa1.25□□□□□ -2.21
RNU6-1140P-201ENST00000410517 A0A1B0GV50 99 aa1.25□□□□□ -2.21
RNU6-1140P-201ENST00000410517 A0A1W2PNM2 257 aa1.25□□□□□ -2.21
RNU6-1140P-201ENST00000410517 IGSF23A1L1A6 192 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms