RNA–Protein interactions for RNA: ENST00000408061.1

SNORD88C-201, Transcript of small nucleolar RNA, C/D box 88C, humanhuman

BASIC

Gene SNORD88C, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88C-201ENST00000408061 C11orf86A6NJI1 115 aa7.21□□□□□ -1.26
SNORD88C-201ENST00000408061 SIVA1O15304 175 aa7.21□□□□□ -1.26
SNORD88C-201ENST00000408061 CCL25O15444 150 aa7.21□□□□□ -1.26
SNORD88C-201ENST00000408061 ZC2HC1BQ5TFG8 222 aa7.21□□□□□ -1.26
SNORD88C-201ENST00000408061 C11orf45Q8TAV5 145 aa7.21□□□□□ -1.26
SNORD88C-201ENST00000408061 TINCRA0A1B0GVN0 87 aa7.2□□□□□ -1.26
SNORD88C-201ENST00000408061 NHLRC4P0CG21 123 aaPredicted RBP7.2□□□□□ -1.26
SNORD88C-201ENST00000408061 CDC42SE2Q9NRR3 84 aa7.2□□□□□ -1.26
SNORD88C-201ENST00000408061 MRPS16Q9Y3D3 137 aaKnown RBP7.2□□□□□ -1.26
SNORD88C-201ENST00000408061 IGLV4-69A0A075B6H9 119 aa7.19□□□□□ -1.26
SNORD88C-201ENST00000408061 A0A0J9YWU9 116 aa7.19□□□□□ -1.26
SNORD88C-201ENST00000408061 E9PLD3 99 aa7.19□□□□□ -1.26
SNORD88C-201ENST00000408061 DEFA6Q01524 100 aa7.19□□□□□ -1.26
SNORD88C-201ENST00000408061 MAJINQ3KP22 176 aa7.19□□□□□ -1.26
SNORD88C-201ENST00000408061 BOD1L2Q8IYS8 172 aa7.19□□□□□ -1.26
SNORD88C-201ENST00000408061 STPG4Q8N801 248 aa7.19□□□□□ -1.26
SNORD88C-201ENST00000408061 DEFB104AQ8WTQ1 72 aa7.19□□□□□ -1.26
SNORD88C-201ENST00000408061 FAM104AQ969W3 186 aa7.19□□□□□ -1.26
SNORD88C-201ENST00000408061 B9D2Q9BPU9 175 aa7.19□□□□□ -1.26
SNORD88C-201ENST00000408061 CHCHD5Q9BSY4 110 aa7.19□□□□□ -1.26
SNORD88C-201ENST00000408061 RETNQ9HD89 108 aa7.19□□□□□ -1.26
SNORD88C-201ENST00000408061 TRAV10A0A0B4J240 114 aa7.18□□□□□ -1.26
SNORD88C-201ENST00000408061 HERVK_113P63121 156 aa7.18□□□□□ -1.26
SNORD88C-201ENST00000408061 LBHQ53QV2 105 aaPredicted RBP7.18□□□□□ -1.26
SNORD88C-201ENST00000408061 ANKRD39Q53RE8 183 aa7.18□□□□□ -1.26
SNORD88C-201ENST00000408061 LELP1Q5T871 98 aa7.18□□□□□ -1.26
SNORD88C-201ENST00000408061 C14orf144Q96I85 54 aa7.18□□□□□ -1.26
SNORD88C-201ENST00000408061 NOTCH1P46531 2555 aa7.18□□□□□ -1.26
SNORD88C-201ENST00000408061 NBEAL1Q6ZS30 2694 aa7.18□□□□□ -1.26
SNORD88C-201ENST00000408061 MGAM2Q2M2H8 2515 aa7.18□□□□□ -1.26
SNORD88C-201ENST00000408061 H3BRM9 83 aa7.17□□□□□ -1.26
SNORD88C-201ENST00000408061 HTN3P15516 51 aa7.17□□□□□ -1.26
SNORD88C-201ENST00000408061 UBE2D1P51668 147 aa7.17□□□□□ -1.26
SNORD88C-201ENST00000408061 HNRNPA3P51991 378 aaKnown RBP7.17□□□□□ -1.26
SNORD88C-201ENST00000408061 Q6ZUT4 128 aa7.17□□□□□ -1.26
SNORD88C-201ENST00000408061 C15orf53Q8NAA6 179 aa7.17□□□□□ -1.26
SNORD88C-201ENST00000408061 MRAPQ8TCY5 172 aa7.17□□□□□ -1.26
SNORD88C-201ENST00000408061 OPRPNQ99935 248 aaPredicted RBP7.17□□□□□ -1.26
SNORD88C-201ENST00000408061 CHAC1Q9BUX1 264 aa7.17□□□□□ -1.26
SNORD88C-201ENST00000408061 GEMIN7Q9H840 131 aaKnown RBP7.17□□□□□ -1.26
SNORD88C-201ENST00000408061 ANK2Q01484 3957 aa7.17□□□□□ -1.26
SNORD88C-201ENST00000408061 IGLV5-45A0A087WSX0 123 aa7.16□□□□□ -1.26
SNORD88C-201ENST00000408061 DEFB131BA0A096LNP1 70 aa7.16□□□□□ -1.26
SNORD88C-201ENST00000408061 A0A096LPF7 62 aa7.16□□□□□ -1.26
SNORD88C-201ENST00000408061 A0A0J9YY99 117 aa7.16□□□□□ -1.26
SNORD88C-201ENST00000408061 TMEM170BQ5T4T1 132 aa7.16□□□□□ -1.26
SNORD88C-201ENST00000408061 Q6ZTC4 211 aa7.16□□□□□ -1.26
SNORD88C-201ENST00000408061 PLEKHB2Q96CS7 222 aa7.16□□□□□ -1.26
SNORD88C-201ENST00000408061 HIGD1BQ9P298 99 aa7.16□□□□□ -1.26
SNORD88C-201ENST00000408061 TRAV8-6A0A0B4J262 113 aa7.15□□□□□ -1.26
SNORD88C-201ENST00000408061 A0A0J9YXV3 536 aa7.15□□□□□ -1.26
SNORD88C-201ENST00000408061 TMEM223A0PJW6 202 aa7.15□□□□□ -1.26
SNORD88C-201ENST00000408061 LINC00587B1AMM8 73 aa7.15□□□□□ -1.26
SNORD88C-201ENST00000408061 PRB2P02812 416 aaPredicted RBP7.15□□□□□ -1.26
SNORD88C-201ENST00000408061 NMUP48645 174 aa7.15□□□□□ -1.26
SNORD88C-201ENST00000408061 GAGE6Q13070 117 aa7.15□□□□□ -1.26
SNORD88C-201ENST00000408061 CEMP1Q6PRD7 247 aaPredicted RBP7.15□□□□□ -1.26
SNORD88C-201ENST00000408061 TMEM262E9PQX1 116 aa7.14□□□□□ -1.27
SNORD88C-201ENST00000408061 M0R143 59 aa7.14□□□□□ -1.27
SNORD88C-201ENST00000408061 LEPROTO15243 131 aa7.14□□□□□ -1.27
SNORD88C-201ENST00000408061 ZNF22P17026 224 aaPredicted RBP7.14□□□□□ -1.27
SNORD88C-201ENST00000408061 LYPD5Q6UWN5 251 aa7.14□□□□□ -1.27
SNORD88C-201ENST00000408061 DNAH3Q8TD57 4116 aa7.13□□□□□ -1.27
SNORD88C-201ENST00000408061 CMYA5Q8N3K9 4069 aa7.13□□□□□ -1.27
SNORD88C-201ENST00000408061 NANOS2P60321 138 aaKnown RBP7.13□□□□□ -1.27
SNORD88C-201ENST00000408061 RBX1P62877 108 aa7.13□□□□□ -1.27
SNORD88C-201ENST00000408061 LINC00242Q5T6M2 205 aa7.13□□□□□ -1.27
SNORD88C-201ENST00000408061 LINC01561Q8N1V8 128 aa7.13□□□□□ -1.27
SNORD88C-201ENST00000408061 IGKV2D-26A0A0A0MRZ7 120 aa7.12□□□□□ -1.27
SNORD88C-201ENST00000408061 MYMXA0A1B0GTQ4 84 aa7.12□□□□□ -1.27
SNORD88C-201ENST00000408061 SS18Q15532 418 aa7.12□□□□□ -1.27
SNORD88C-201ENST00000408061 TAL2Q16559 108 aa7.12□□□□□ -1.27
SNORD88C-201ENST00000408061 IGHV1-58A0A0C4DH39 117 aa7.11□□□□□ -1.27
SNORD88C-201ENST00000408061 J3QQQ9 107 aa7.11□□□□□ -1.27
SNORD88C-201ENST00000408061 LGALS3P17931 250 aaKnown RBP7.11□□□□□ -1.27
SNORD88C-201ENST00000408061 CTAG1AP78358 180 aa7.11□□□□□ -1.27
SNORD88C-201ENST00000408061 PCP2Q8IVA1 136 aa7.11□□□□□ -1.27
SNORD88C-201ENST00000408061 LINC00469Q8N7U9 141 aa7.11□□□□□ -1.27
SNORD88C-201ENST00000408061 IGLV4-60A0A075B6I1 120 aa7.1□□□□□ -1.27
SNORD88C-201ENST00000408061 TRAV13-1A0A0B4J241 112 aa7.1□□□□□ -1.27
SNORD88C-201ENST00000408061 RNASE13Q5GAN3 156 aaKnown RBP7.1□□□□□ -1.27
SNORD88C-201ENST00000408061 LINC00959A0A1B0GUT2 108 aa7.09□□□□□ -1.27
SNORD88C-201ENST00000408061 ZNF815PA8K554 130 aa7.09□□□□□ -1.27
SNORD88C-201ENST00000408061 HSD52Q0P140 79 aa7.09□□□□□ -1.27
SNORD88C-201ENST00000408061 MPV17L2Q567V2 206 aa7.09□□□□□ -1.27
SNORD88C-201ENST00000408061 SFTA2Q6UW10 78 aa7.09□□□□□ -1.27
SNORD88C-201ENST00000408061 C2orf91Q6ZV80 131 aa7.09□□□□□ -1.27
SNORD88C-201ENST00000408061 CDKN2A-AS1Q9UH64 79 aa7.09□□□□□ -1.27
SNORD88C-201ENST00000408061 TRAV8-4A0A0B4J246 113 aa7.08□□□□□ -1.28
SNORD88C-201ENST00000408061 IGHV3OR16-9A0A0B4J2B5 98 aa7.08□□□□□ -1.28
SNORD88C-201ENST00000408061 IGLV5-39A0A0G2JS06 123 aa7.08□□□□□ -1.28
SNORD88C-201ENST00000408061 IGHV3-30-3P0DP02 117 aa7.08□□□□□ -1.28
SNORD88C-201ENST00000408061 TCTAP57738 103 aa7.08□□□□□ -1.28
SNORD88C-201ENST00000408061 PRR34Q9NV39 138 aa7.08□□□□□ -1.28
SNORD88C-201ENST00000408061 A0A087WZ39 114 aa7.07□□□□□ -1.28
SNORD88C-201ENST00000408061 K7EP13 123 aa7.07□□□□□ -1.28
SNORD88C-201ENST00000408061 ANGP03950 147 aaKnown RBP7.07□□□□□ -1.28
SNORD88C-201ENST00000408061 COX6A2Q02221 97 aa7.07□□□□□ -1.28
SNORD88C-201ENST00000408061 REG3AQ06141 175 aa7.07□□□□□ -1.28
SNORD88C-201ENST00000408061 ZFAND6Q6FIF0 208 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 176.2 ms