RNA–Protein interactions for RNA: ENST00000406109.5

RPA3-204, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-204ENST00000406109 TMEM243Q9BU79 118 aa4.09□□□□□ -1.75
RPA3-204ENST00000406109 TM2D2Q9BX73 214 aa4.09□□□□□ -1.75
RPA3-204ENST00000406109 CTDSP1Q9GZU7 261 aa4.09□□□□□ -1.75
RPA3-204ENST00000406109 TRBV6-5A0A0K0K1A5 114 aa4.08□□□□□ -1.76
RPA3-204ENST00000406109 A0A1B0GXF2 115 aa4.08□□□□□ -1.76
RPA3-204ENST00000406109 C7orf77A4D0Y5 90 aa4.08□□□□□ -1.76
RPA3-204ENST00000406109 VCYO14598 125 aa4.08□□□□□ -1.76
RPA3-204ENST00000406109 PPP1R17O96001 155 aa4.08□□□□□ -1.76
RPA3-204ENST00000406109 RBX1P62877 108 aa4.08□□□□□ -1.76
RPA3-204ENST00000406109 MPV17L2Q567V2 206 aa4.08□□□□□ -1.76
RPA3-204ENST00000406109 ATP5L2Q7Z4Y8 100 aa4.08□□□□□ -1.76
RPA3-204ENST00000406109 BTF3L4Q96K17 158 aa4.08□□□□□ -1.76
RPA3-204ENST00000406109 IMMP2LQ96T52 175 aa4.08□□□□□ -1.76
RPA3-204ENST00000406109 CHCHD7Q9BUK0 85 aa4.08□□□□□ -1.76
RPA3-204ENST00000406109 KRTAP9-3Q9BYQ3 159 aa4.08□□□□□ -1.76
RPA3-204ENST00000406109 RPS10P5Q9NQ39 176 aa4.08□□□□□ -1.76
RPA3-204ENST00000406109 IGKV2D-24A0A075B6R9 120 aa4.07□□□□□ -1.76
RPA3-204ENST00000406109 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.07□□□□□ -1.76
RPA3-204ENST00000406109 TMEM238LA0A1B0GVL6 79 aa4.07□□□□□ -1.76
RPA3-204ENST00000406109 IGKV2-29A2NJV5 120 aaPredicted RBP4.07□□□□□ -1.76
RPA3-204ENST00000406109 D6R8Y8 96 aa4.07□□□□□ -1.76
RPA3-204ENST00000406109 TNFRSF6BO95407 300 aa4.07□□□□□ -1.76
RPA3-204ENST00000406109 APOC3P02656 99 aa4.07□□□□□ -1.76
RPA3-204ENST00000406109 CRPP02741 224 aa4.07□□□□□ -1.76
RPA3-204ENST00000406109 APCSP02743 223 aa4.07□□□□□ -1.76
RPA3-204ENST00000406109 S100PP25815 95 aa4.07□□□□□ -1.76
RPA3-204ENST00000406109 FCER1GP30273 86 aa4.07□□□□□ -1.76
RPA3-204ENST00000406109 POLR2KP53803 58 aaKnown RBP4.07□□□□□ -1.76
RPA3-204ENST00000406109 Q0VG73 95 aa4.07□□□□□ -1.76
RPA3-204ENST00000406109 WFDC2Q14508 124 aa4.07□□□□□ -1.76
RPA3-204ENST00000406109 LAGE3Q14657 143 aa4.07□□□□□ -1.76
RPA3-204ENST00000406109 C10orf91Q5T1B1 145 aa4.07□□□□□ -1.76
RPA3-204ENST00000406109 AMMECR1LQ6DCA0 310 aa4.07□□□□□ -1.76
RPA3-204ENST00000406109 RNASEKQ6P5S7 137 aaKnown RBP4.07□□□□□ -1.76
RPA3-204ENST00000406109 ENHOQ6UWT2 76 aa4.07□□□□□ -1.76
RPA3-204ENST00000406109 TMEM136Q6ZRR5 245 aa4.07□□□□□ -1.76
RPA3-204ENST00000406109 LINC00269Q8N2A0 174 aa4.07□□□□□ -1.76
RPA3-204ENST00000406109 NRACQ8N912 160 aa4.07□□□□□ -1.76
RPA3-204ENST00000406109 CLRN3Q8NCR9 226 aa4.07□□□□□ -1.76
RPA3-204ENST00000406109 RMI2Q96E14 147 aa4.07□□□□□ -1.76
RPA3-204ENST00000406109 TMEM242Q9NWH2 141 aa4.07□□□□□ -1.76
RPA3-204ENST00000406109 CARHSP1Q9Y2V2 147 aaKnown RBP4.07□□□□□ -1.76
RPA3-204ENST00000406109 IGLV4-60A0A075B6I1 120 aa4.06□□□□□ -1.76
RPA3-204ENST00000406109 TRBV27A0A0K0K1C4 114 aa4.06□□□□□ -1.76
RPA3-204ENST00000406109 LOC389332A0A1B0GUA5 103 aa4.06□□□□□ -1.76
RPA3-204ENST00000406109 A0A1B0GUV1 79 aa4.06□□□□□ -1.76
RPA3-204ENST00000406109 TSHBP01222 138 aa4.06□□□□□ -1.76
RPA3-204ENST00000406109 PPBPP02775 128 aa4.06□□□□□ -1.76
RPA3-204ENST00000406109 SUMO2P61956 95 aaKnown RBP4.06□□□□□ -1.76
RPA3-204ENST00000406109 NDUFA5Q16718 116 aa4.06□□□□□ -1.76
RPA3-204ENST00000406109 CLPSL2Q6UWE3 100 aa4.06□□□□□ -1.76
RPA3-204ENST00000406109 SCXQ7RTU7 201 aa4.06□□□□□ -1.76
RPA3-204ENST00000406109 SLC7A5P1Q8MH63 180 aa4.06□□□□□ -1.76
RPA3-204ENST00000406109 ORMDL3Q8N138 153 aa4.06□□□□□ -1.76
RPA3-204ENST00000406109 BAALCQ8WXS3 180 aa4.06□□□□□ -1.76
RPA3-204ENST00000406109 TMEM101Q96IK0 257 aa4.06□□□□□ -1.76
RPA3-204ENST00000406109 C20orf78Q9BR46 151 aa4.06□□□□□ -1.76
RPA3-204ENST00000406109 COX11Q9Y6N1 276 aa4.06□□□□□ -1.76
RPA3-204ENST00000406109 TRBV24-1A0A075B6N3 115 aa4.05□□□□□ -1.76
RPA3-204ENST00000406109 IGKV3OR2-268A0A0C4DH90 116 aa4.05□□□□□ -1.76
RPA3-204ENST00000406109 H7C423 109 aa4.05□□□□□ -1.76
RPA3-204ENST00000406109 LECT2O14960 151 aa4.05□□□□□ -1.76
RPA3-204ENST00000406109 NPYP01303 97 aa4.05□□□□□ -1.76
RPA3-204ENST00000406109 MT1HL1P0DM35 61 aa4.05□□□□□ -1.76
RPA3-204ENST00000406109 FGF6P10767 208 aa4.05□□□□□ -1.76
RPA3-204ENST00000406109 HNRNPA3P51991 378 aaKnown RBP4.05□□□□□ -1.76
RPA3-204ENST00000406109 REG3AQ06141 175 aa4.05□□□□□ -1.76
RPA3-204ENST00000406109 RHEBQ15382 184 aa4.05□□□□□ -1.76
RPA3-204ENST00000406109 MIAQ16674 131 aa4.05□□□□□ -1.76
RPA3-204ENST00000406109 DGAT2L7PQ6IED9 249 aa4.05□□□□□ -1.76
RPA3-204ENST00000406109 C20orf203Q8NBC4 194 aa4.05□□□□□ -1.76
RPA3-204ENST00000406109 PRELID3AQ96N28 172 aa4.05□□□□□ -1.76
RPA3-204ENST00000406109 KIR2DL4Q99706 377 aa4.05□□□□□ -1.76
RPA3-204ENST00000406109 C1orf43Q9BWL3 253 aa4.05□□□□□ -1.76
RPA3-204ENST00000406109 FAT4Q6V0I7 4981 aa4.04□□□□□ -1.76
RPA3-204ENST00000406109 IGLV10-54A0A075B6I4 117 aa4.04□□□□□ -1.76
RPA3-204ENST00000406109 TRAV9-1A0A075B6T8 112 aa4.04□□□□□ -1.76
RPA3-204ENST00000406109 TCAPO15273 167 aa4.04□□□□□ -1.76
RPA3-204ENST00000406109 SNAPINO95295 136 aa4.04□□□□□ -1.76
RPA3-204ENST00000406109 ESDP10768 282 aa4.04□□□□□ -1.76
RPA3-204ENST00000406109 RAB5AP20339 215 aa4.04□□□□□ -1.76
RPA3-204ENST00000406109 KIAA1644Q3SXP7 199 aa4.04□□□□□ -1.76
RPA3-204ENST00000406109 LINC01620Q4KN68 170 aa4.04□□□□□ -1.76
RPA3-204ENST00000406109 SVBPQ8N300 66 aa4.04□□□□□ -1.76
RPA3-204ENST00000406109 PRR34Q9NV39 138 aa4.04□□□□□ -1.76
RPA3-204ENST00000406109 TRAV8-4A0A0B4J246 113 aa4.03□□□□□ -1.76
RPA3-204ENST00000406109 PHOX2AO14813 284 aa4.03□□□□□ -1.76
RPA3-204ENST00000406109 HLA-DQA1P01909 254 aa4.03□□□□□ -1.76
RPA3-204ENST00000406109 ZNF25P17030 456 aaPredicted RBP4.03□□□□□ -1.76
RPA3-204ENST00000406109 RPL32P62910 135 aaKnown RBP4.03□□□□□ -1.76
RPA3-204ENST00000406109 FABP9Q0Z7S8 132 aa4.03□□□□□ -1.76
RPA3-204ENST00000406109 OR5A1Q8NGJ0 315 aa4.03□□□□□ -1.76
RPA3-204ENST00000406109 CIRBP-AS1Q8TBR5 109 aa4.03□□□□□ -1.76
RPA3-204ENST00000406109 TMEM18Q96B42 140 aa4.03□□□□□ -1.76
RPA3-204ENST00000406109 CHAC1Q9BUX1 264 aa4.03□□□□□ -1.76
RPA3-204ENST00000406109 SMIM2Q9BVW6 85 aa4.03□□□□□ -1.76
RPA3-204ENST00000406109 GNB1LQ9BYB4 327 aa4.03□□□□□ -1.76
RPA3-204ENST00000406109 MAP1LC3AQ9H492 121 aa4.03□□□□□ -1.76
RPA3-204ENST00000406109 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.02□□□□□ -1.77
RPA3-204ENST00000406109 TGIF2-C20orf24A0A0A6YYL0 155 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms