RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.71□□□□□ -1.18
CLIP4-204ENST00000404424 CELSR2Q9HCU4 2923 aa7.7□□□□□ -1.18
CLIP4-204ENST00000404424 H7C423 109 aa7.7□□□□□ -1.18
CLIP4-204ENST00000404424 K7EQD1 137 aa7.7□□□□□ -1.18
CLIP4-204ENST00000404424 COX6A2Q02221 97 aa7.7□□□□□ -1.18
CLIP4-204ENST00000404424 Q6ZSV7 163 aa7.7□□□□□ -1.18
CLIP4-204ENST00000404424 TEX29Q8N6K0 151 aa7.7□□□□□ -1.18
CLIP4-204ENST00000404424 Q96MF0 132 aa7.7□□□□□ -1.18
CLIP4-204ENST00000404424 TRAV4A0A0B4J268 109 aa7.7□□□□□ -1.18
CLIP4-204ENST00000404424 TEX49A0A1B0GTD5 131 aa7.7□□□□□ -1.18
CLIP4-204ENST00000404424 Q9H8V8 135 aa7.7□□□□□ -1.18
CLIP4-204ENST00000404424 ANKRD17O75179 2603 aaKnown RBP7.69□□□□□ -1.18
CLIP4-204ENST00000404424 TRAV8-4A0A0B4J246 113 aa7.69□□□□□ -1.18
CLIP4-204ENST00000404424 KRTAP10-9P60411 292 aa7.69□□□□□ -1.18
CLIP4-204ENST00000404424 LINC00308Q8TCZ7 52 aa7.69□□□□□ -1.18
CLIP4-204ENST00000404424 CITED1Q99966 193 aa7.69□□□□□ -1.18
CLIP4-204ENST00000404424 USP9YO00507 2555 aaPredicted RBP7.69□□□□□ -1.18
CLIP4-204ENST00000404424 CFAP46Q8IYW2 2715 aa7.69□□□□□ -1.18
CLIP4-204ENST00000404424 CSMD2Q7Z408 3487 aa7.69□□□□□ -1.18
CLIP4-204ENST00000404424 SMIM1B2RUZ4 78 aa7.68□□□□□ -1.18
CLIP4-204ENST00000404424 SNCGO76070 127 aa7.68□□□□□ -1.18
CLIP4-204ENST00000404424 LINC00694P0DN24 101 aa7.68□□□□□ -1.18
CLIP4-204ENST00000404424 CMC4P56277 68 aaPredicted RBP7.68□□□□□ -1.18
CLIP4-204ENST00000404424 CRYBG3Q68DQ2 2970 aa7.68□□□□□ -1.18
CLIP4-204ENST00000404424 DAND5Q8N907 189 aa7.68□□□□□ -1.18
CLIP4-204ENST00000404424 CITED2Q99967 270 aaPredicted RBP7.68□□□□□ -1.18
CLIP4-204ENST00000404424 PPDPFQ9H3Y8 114 aa7.68□□□□□ -1.18
CLIP4-204ENST00000404424 CDC42SE2Q9NRR3 84 aa7.68□□□□□ -1.18
CLIP4-204ENST00000404424 CCL24O00175 119 aa7.67□□□□□ -1.18
CLIP4-204ENST00000404424 HERV-K104P63124 156 aa7.67□□□□□ -1.18
CLIP4-204ENST00000404424 NTM-AS1Q6ZSK4 140 aa7.67□□□□□ -1.18
CLIP4-204ENST00000404424 CLEC2BQ92478 149 aa7.67□□□□□ -1.18
CLIP4-204ENST00000404424 PRB1P04280 392 aa7.67□□□□□ -1.18
CLIP4-204ENST00000404424 DEFB121Q5J5C9 76 aa7.67□□□□□ -1.18
CLIP4-204ENST00000404424 Q6ZTI0 123 aa7.67□□□□□ -1.18
CLIP4-204ENST00000404424 MAP1AP78559 2803 aaPredicted RBP7.66□□□□□ -1.18
CLIP4-204ENST00000404424 PIEZO1Q92508 2521 aa7.66□□□□□ -1.18
CLIP4-204ENST00000404424 TRAV13-1A0A0B4J241 112 aa7.66□□□□□ -1.18
CLIP4-204ENST00000404424 Q6Q795 121 aa7.66□□□□□ -1.18
CLIP4-204ENST00000404424 ZNF625Q96I27 306 aaPredicted RBP7.66□□□□□ -1.18
CLIP4-204ENST00000404424 FLNCQ14315 2725 aa7.66□□□□□ -1.18
CLIP4-204ENST00000404424 CACNA1AO00555 2505 aa7.66□□□□□ -1.18
CLIP4-204ENST00000404424 FAM240AA0A1B0GVK7 77 aa7.66□□□□□ -1.18
CLIP4-204ENST00000404424 GAGE2BQ13066 116 aa7.66□□□□□ -1.18
CLIP4-204ENST00000404424 MRPL23Q16540 153 aaKnown RBP7.66□□□□□ -1.18
CLIP4-204ENST00000404424 GAGE2EQ4V326 116 aa7.66□□□□□ -1.18
CLIP4-204ENST00000404424 GAGE2DQ9UEU5 116 aa7.66□□□□□ -1.18
CLIP4-204ENST00000404424 ACACBO00763 2458 aa7.65□□□□□ -1.18
CLIP4-204ENST00000404424 F5H768 121 aa7.65□□□□□ -1.18
CLIP4-204ENST00000404424 MEIG1Q5JSS6 88 aa7.65□□□□□ -1.18
CLIP4-204ENST00000404424 PRIMA1Q86XR5 153 aa7.65□□□□□ -1.18
CLIP4-204ENST00000404424 GAGE12JA6NER3 117 aa7.64□□□□□ -1.19
CLIP4-204ENST00000404424 DNAJC9-AS1A6NH13 148 aa7.64□□□□□ -1.19
CLIP4-204ENST00000404424 COX7A2LO14548 114 aa7.64□□□□□ -1.19
CLIP4-204ENST00000404424 UBE2L6O14933 153 aa7.64□□□□□ -1.19
CLIP4-204ENST00000404424 GAGE4Q13068 117 aa7.64□□□□□ -1.19
CLIP4-204ENST00000404424 GAGE5Q13069 117 aa7.64□□□□□ -1.19
CLIP4-204ENST00000404424 HIST2H2BDQ6DRA6 164 aa7.64□□□□□ -1.19
CLIP4-204ENST00000404424 SHISA2Q6UWI4 295 aa7.64□□□□□ -1.19
CLIP4-204ENST00000404424 KRTAP1-3Q8IUG1 177 aa7.64□□□□□ -1.19
CLIP4-204ENST00000404424 C16orf74Q96GX8 76 aa7.64□□□□□ -1.19
CLIP4-204ENST00000404424 TMEM243Q9BU79 118 aa7.64□□□□□ -1.19
CLIP4-204ENST00000404424 IGSF10Q6WRI0 2623 aa7.64□□□□□ -1.19
CLIP4-204ENST00000404424 TRAV26-1A0A087WT03 109 aa7.64□□□□□ -1.19
CLIP4-204ENST00000404424 NDUFA7O95182 113 aa7.64□□□□□ -1.19
CLIP4-204ENST00000404424 FAM110AQ9BQ89 295 aa7.64□□□□□ -1.19
CLIP4-204ENST00000404424 ANAPC13Q9BS18 74 aa7.64□□□□□ -1.19
CLIP4-204ENST00000404424 NOP10Q9NPE3 64 aaKnown RBP7.64□□□□□ -1.19
CLIP4-204ENST00000404424 FBN2P35556 2912 aa7.63□□□□□ -1.19
CLIP4-204ENST00000404424 A0A1W2PRX2 142 aa7.63□□□□□ -1.19
CLIP4-204ENST00000404424 SOSTDC1Q6X4U4 206 aa7.63□□□□□ -1.19
CLIP4-204ENST00000404424 TRBV6-4A0A1B0GX49 114 aa7.62□□□□□ -1.19
CLIP4-204ENST00000404424 C15orf53Q8NAA6 179 aa7.62□□□□□ -1.19
CLIP4-204ENST00000404424 A0A0U1RRA0 63 aa7.62□□□□□ -1.19
CLIP4-204ENST00000404424 CRLF1O75462 422 aa7.62□□□□□ -1.19
CLIP4-204ENST00000404424 PF4P02776 101 aa7.62□□□□□ -1.19
CLIP4-204ENST00000404424 ZNF843Q8N446 348 aa7.62□□□□□ -1.19
CLIP4-204ENST00000404424 C11orf44Q8N8P7 122 aa7.62□□□□□ -1.19
CLIP4-204ENST00000404424 BBC3Q96PG8 261 aaPredicted RBP7.62□□□□□ -1.19
CLIP4-204ENST00000404424 ZANQ9Y493 2812 aa7.62□□□□□ -1.19
CLIP4-204ENST00000404424 GIG44P09565 113 aaPredicted RBP7.61□□□□□ -1.19
CLIP4-204ENST00000404424 OVOL2Q9BRP0 275 aa7.61□□□□□ -1.19
CLIP4-204ENST00000404424 MXRA5Q9NR99 2828 aa7.61□□□□□ -1.19
CLIP4-204ENST00000404424 TRGV2A0A075B6R0 118 aa7.61□□□□□ -1.19
CLIP4-204ENST00000404424 PLAC8L1A1L4L8 177 aa7.61□□□□□ -1.19
CLIP4-204ENST00000404424 TRACP01848 142 aa7.61□□□□□ -1.19
CLIP4-204ENST00000404424 MYO18BQ8IUG5 2567 aa7.61□□□□□ -1.19
CLIP4-204ENST00000404424 POLQO75417 2590 aa7.6□□□□□ -1.19
CLIP4-204ENST00000404424 TTC32Q5I0X7 151 aa7.6□□□□□ -1.19
CLIP4-204ENST00000404424 FAM208BQ5VWN6 2430 aa7.6□□□□□ -1.19
CLIP4-204ENST00000404424 AKAP9Q99996 3911 aa7.6□□□□□ -1.19
CLIP4-204ENST00000404424 ACYP1P07311 99 aa7.6□□□□□ -1.19
CLIP4-204ENST00000404424 NDUFV3P56181 108 aaKnown RBP7.6□□□□□ -1.19
CLIP4-204ENST00000404424 ESM1Q9NQ30 184 aa7.6□□□□□ -1.19
CLIP4-204ENST00000404424 UTP20O75691 2785 aaKnown RBP7.6□□□□□ -1.19
CLIP4-204ENST00000404424 TRAV13-2A0A0B4J235 113 aa7.59□□□□□ -1.19
CLIP4-204ENST00000404424 GAGE7O76087 117 aa7.59□□□□□ -1.19
CLIP4-204ENST00000404424 GAGE12FP0CL80 117 aa7.59□□□□□ -1.19
CLIP4-204ENST00000404424 GAGE12GP0CL81 117 aa7.59□□□□□ -1.19
CLIP4-204ENST00000404424 GAGE12IP0CL82 117 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms