RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 ATP6V0E2Q8NHE4 81 aa17.89■□□□□ 0.45
CPNE1-205ENST00000401607 F5H768 121 aa17.89■□□□□ 0.45
CPNE1-205ENST00000401607 BOD1L2Q8IYS8 172 aa17.89■□□□□ 0.45
CPNE1-205ENST00000401607 CHAC1Q9BUX1 264 aa17.87■□□□□ 0.45
CPNE1-205ENST00000401607 MRPS16Q9Y3D3 137 aaKnown RBP17.87■□□□□ 0.45
CPNE1-205ENST00000401607 CSDC2Q9Y534 153 aaKnown RBP17.87■□□□□ 0.45
CPNE1-205ENST00000401607 TRAV26-1A0A087WT03 109 aa17.86■□□□□ 0.45
CPNE1-205ENST00000401607 A0A0J9YXV3 536 aa17.86■□□□□ 0.45
CPNE1-205ENST00000401607 HTN3P15516 51 aa17.86■□□□□ 0.45
CPNE1-205ENST00000401607 TMEM97Q5BJF2 176 aa17.86■□□□□ 0.45
CPNE1-205ENST00000401607 DGAT2L7PQ6IED9 249 aa17.86■□□□□ 0.45
CPNE1-205ENST00000401607 H7C423 109 aa17.85■□□□□ 0.45
CPNE1-205ENST00000401607 DLEU1O43261 78 aa17.85■□□□□ 0.45
CPNE1-205ENST00000401607 TTTY13Q9BZ97 58 aa17.85■□□□□ 0.45
CPNE1-205ENST00000401607 UBE2L6O14933 153 aa17.84■□□□□ 0.45
CPNE1-205ENST00000401607 EREGO14944 169 aa17.84■□□□□ 0.45
CPNE1-205ENST00000401607 C2orf91Q6ZV80 131 aa17.84■□□□□ 0.45
CPNE1-205ENST00000401607 SNHG12Q9BXW3 62 aa17.84■□□□□ 0.45
CPNE1-205ENST00000401607 A0A096LPF7 62 aa17.84■□□□□ 0.45
CPNE1-205ENST00000401607 A0A0J9YWU9 116 aa17.83■□□□□ 0.44
CPNE1-205ENST00000401607 E9PLD3 99 aa17.83■□□□□ 0.44
CPNE1-205ENST00000401607 TMEM170BQ5T4T1 132 aa17.83■□□□□ 0.44
CPNE1-205ENST00000401607 SMAGPQ0VAQ4 97 aa17.82■□□□□ 0.44
CPNE1-205ENST00000401607 DEFB121Q5J5C9 76 aa17.82■□□□□ 0.44
CPNE1-205ENST00000401607 TM2D3Q9BRN9 247 aa17.82■□□□□ 0.44
CPNE1-205ENST00000401607 C2orf88Q9BSF0 95 aa17.82■□□□□ 0.44
CPNE1-205ENST00000401607 ZNF22P17026 224 aaPredicted RBP17.81■□□□□ 0.44
CPNE1-205ENST00000401607 GAGE6Q13070 117 aa17.81■□□□□ 0.44
CPNE1-205ENST00000401607 OR5A1Q8NGJ0 315 aa17.81■□□□□ 0.44
CPNE1-205ENST00000401607 SPATA25Q9BR10 227 aa17.81■□□□□ 0.44
CPNE1-205ENST00000401607 CDC42SE2Q9NRR3 84 aa17.81■□□□□ 0.44
CPNE1-205ENST00000401607 NOTCH1P46531 2555 aa17.81■□□□□ 0.44
CPNE1-205ENST00000401607 M0R143 59 aa17.81■□□□□ 0.44
CPNE1-205ENST00000401607 UBE2D1P51668 147 aa17.81■□□□□ 0.44
CPNE1-205ENST00000401607 AMMECR1LQ6DCA0 310 aa17.81■□□□□ 0.44
CPNE1-205ENST00000401607 LURAP1LQ8IV03 231 aa17.8■□□□□ 0.44
CPNE1-205ENST00000401607 CHCHD5Q9BSY4 110 aa17.8■□□□□ 0.44
CPNE1-205ENST00000401607 MAPKAPK5-AS1Q8N8E1 139 aa17.79■□□□□ 0.44
CPNE1-205ENST00000401607 TRAV8-6A0A0B4J262 113 aa17.79■□□□□ 0.44
CPNE1-205ENST00000401607 Q6ZTC4 211 aa17.79■□□□□ 0.44
CPNE1-205ENST00000401607 MRAPQ8TCY5 172 aa17.79■□□□□ 0.44
CPNE1-205ENST00000401607 TINCRA0A1B0GVN0 87 aa17.78■□□□□ 0.44
CPNE1-205ENST00000401607 ZNF25P17030 456 aaPredicted RBP17.78■□□□□ 0.44
CPNE1-205ENST00000401607 HERVK_113P61574 105 aa17.78■□□□□ 0.44
CPNE1-205ENST00000401607 TMEM101Q96IK0 257 aa17.78■□□□□ 0.44
CPNE1-205ENST00000401607 TMEM223A0PJW6 202 aa17.76■□□□□ 0.43
CPNE1-205ENST00000401607 MRPL23Q16540 153 aaKnown RBP17.76■□□□□ 0.43
CPNE1-205ENST00000401607 ICOSQ9Y6W8 199 aa17.76■□□□□ 0.43
CPNE1-205ENST00000401607 SIVA1O15304 175 aa17.75■□□□□ 0.43
CPNE1-205ENST00000401607 IGLV4-60A0A075B6I1 120 aa17.74■□□□□ 0.43
CPNE1-205ENST00000401607 NBEAL1Q6ZS30 2694 aa17.74■□□□□ 0.43
CPNE1-205ENST00000401607 HUWE1Q7Z6Z7 4374 aaKnown RBP17.73■□□□□ 0.43
CPNE1-205ENST00000401607 NANOS2P60321 138 aaKnown RBP17.73■□□□□ 0.43
CPNE1-205ENST00000401607 FAM19A3Q7Z5A8 133 aa17.73■□□□□ 0.43
CPNE1-205ENST00000401607 C11orf45Q8TAV5 145 aa17.73■□□□□ 0.43
CPNE1-205ENST00000401607 HINT1P49773 126 aaPredicted RBP17.72■□□□□ 0.43
CPNE1-205ENST00000401607 TIRAPP58753 221 aa17.71■□□□□ 0.43
CPNE1-205ENST00000401607 TSPEAR-AS2P59090 65 aa17.71■□□□□ 0.43
CPNE1-205ENST00000401607 BATFQ16520 125 aa17.71■□□□□ 0.43
CPNE1-205ENST00000401607 LINC00242Q5T6M2 205 aa17.71■□□□□ 0.43
CPNE1-205ENST00000401607 MGAM2Q2M2H8 2515 aa17.71■□□□□ 0.43
CPNE1-205ENST00000401607 TENM3Q9P273 2699 aa17.71■□□□□ 0.43
CPNE1-205ENST00000401607 MPV17L2Q567V2 206 aa17.71■□□□□ 0.43
CPNE1-205ENST00000401607 IGLV5-45A0A087WSX0 123 aa17.7■□□□□ 0.42
CPNE1-205ENST00000401607 TRAV13-1A0A0B4J241 112 aa17.7■□□□□ 0.42
CPNE1-205ENST00000401607 MYMXA0A1B0GTQ4 84 aa17.7■□□□□ 0.42
CPNE1-205ENST00000401607 COX6A2Q02221 97 aa17.7■□□□□ 0.42
CPNE1-205ENST00000401607 SH2D6Q7Z4S9 175 aa17.7■□□□□ 0.42
CPNE1-205ENST00000401607 GEMIN7Q9H840 131 aaKnown RBP17.7■□□□□ 0.42
CPNE1-205ENST00000401607 H3BNG1 76 aa17.69■□□□□ 0.42
CPNE1-205ENST00000401607 HIGD1BQ9P298 99 aa17.69■□□□□ 0.42
CPNE1-205ENST00000401607 LBHQ53QV2 105 aaPredicted RBP17.68■□□□□ 0.42
CPNE1-205ENST00000401607 LINC00469Q8N7U9 141 aa17.68■□□□□ 0.42
CPNE1-205ENST00000401607 IGHV3-64A0A075B6Q5 118 aa17.68■□□□□ 0.42
CPNE1-205ENST00000401607 A0A1B0GUV1 79 aa17.67■□□□□ 0.42
CPNE1-205ENST00000401607 TMEM262E9PQX1 116 aa17.67■□□□□ 0.42
CPNE1-205ENST00000401607 LEPROTO15243 131 aa17.67■□□□□ 0.42
CPNE1-205ENST00000401607 RBX1P62877 108 aa17.67■□□□□ 0.42
CPNE1-205ENST00000401607 CDKN2A-AS1Q9UH64 79 aa17.67■□□□□ 0.42
CPNE1-205ENST00000401607 HERVK_113P63121 156 aa17.66■□□□□ 0.42
CPNE1-205ENST00000401607 ZNF815PA8K554 130 aa17.66■□□□□ 0.42
CPNE1-205ENST00000401607 J3QQQ9 107 aa17.66■□□□□ 0.42
CPNE1-205ENST00000401607 SEC11AP67812 179 aa17.66■□□□□ 0.42
CPNE1-205ENST00000401607 BVES-AS1Q5T3Y7 98 aa17.65■□□□□ 0.42
CPNE1-205ENST00000401607 TRAV8-3A0A0A6YYJ7 113 aa17.64■□□□□ 0.41
CPNE1-205ENST00000401607 LELP1Q5T871 98 aa17.64■□□□□ 0.41
CPNE1-205ENST00000401607 DEFB131BA0A096LNP1 70 aa17.63■□□□□ 0.41
CPNE1-205ENST00000401607 SPINK8P0C7L1 97 aa17.63■□□□□ 0.41
CPNE1-205ENST00000401607 IGHV1-58A0A0C4DH39 117 aa17.63■□□□□ 0.41
CPNE1-205ENST00000401607 IGHV3-30-3P0DP02 117 aa17.63■□□□□ 0.41
CPNE1-205ENST00000401607 HSD52Q0P140 79 aa17.63■□□□□ 0.41
CPNE1-205ENST00000401607 LGALS3P17931 250 aaKnown RBP17.62■□□□□ 0.41
CPNE1-205ENST00000401607 LYPD5Q6UWN5 251 aa17.62■□□□□ 0.41
CPNE1-205ENST00000401607 PLEKHB2Q96CS7 222 aa17.62■□□□□ 0.41
CPNE1-205ENST00000401607 IGKV3OR2-268A0A0C4DH90 116 aa17.61■□□□□ 0.41
CPNE1-205ENST00000401607 H3BRM9 83 aa17.61■□□□□ 0.41
CPNE1-205ENST00000401607 Q8N3U1 123 aa17.6■□□□□ 0.41
CPNE1-205ENST00000401607 DNAH9Q9NYC9 4486 aa17.58■□□□□ 0.4
CPNE1-205ENST00000401607 COL5A1-AS1Q5SY13 56 aa17.57■□□□□ 0.4
CPNE1-205ENST00000401607 LINC00959A0A1B0GUT2 108 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms