RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 TRGV1A0A0A0MS02 117 aa17.16■□□□□ 0.34
PABPN1-202ENST00000397276 RHODO00212 210 aa17.16■□□□□ 0.34
PABPN1-202ENST00000397276 EDA2RQ9HAV5 297 aa17.16■□□□□ 0.34
PABPN1-202ENST00000397276 TMEM223A0PJW6 202 aa17.15■□□□□ 0.34
PABPN1-202ENST00000397276 PLA2G2AP14555 144 aa17.15■□□□□ 0.34
PABPN1-202ENST00000397276 TMEM263Q8WUH6 116 aaKnown RBP17.15■□□□□ 0.34
PABPN1-202ENST00000397276 IGHV3-53P01767 116 aa17.15■□□□□ 0.34
PABPN1-202ENST00000397276 SETXQ7Z333 2677 aaKnown RBP17.14■□□□□ 0.33
PABPN1-202ENST00000397276 TRAV25A0A0B4J276 109 aa17.14■□□□□ 0.33
PABPN1-202ENST00000397276 SMR3AQ99954 134 aa17.14■□□□□ 0.33
PABPN1-202ENST00000397276 J3QKU1 62 aa17.14■□□□□ 0.33
PABPN1-202ENST00000397276 ANAPC13Q9BS18 74 aa17.14■□□□□ 0.33
PABPN1-202ENST00000397276 CHCHD7Q9BUK0 85 aa17.13■□□□□ 0.33
PABPN1-202ENST00000397276 CRLF1O75462 422 aa17.12■□□□□ 0.33
PABPN1-202ENST00000397276 BEAN1Q3B7T3 259 aa17.12■□□□□ 0.33
PABPN1-202ENST00000397276 NTN5Q8WTR8 489 aaPredicted RBP17.12■□□□□ 0.33
PABPN1-202ENST00000397276 LINC00467Q9BRT7 94 aa17.12■□□□□ 0.33
PABPN1-202ENST00000397276 Q1RN00 199 aa17.11■□□□□ 0.33
PABPN1-202ENST00000397276 PIK3CD-AS1Q5SR53 167 aa17.11■□□□□ 0.33
PABPN1-202ENST00000397276 RS1O15537 224 aa17.11■□□□□ 0.33
PABPN1-202ENST00000397276 RNASE1P07998 156 aaKnown RBP17.11■□□□□ 0.33
PABPN1-202ENST00000397276 UNC79Q9P2D8 2635 aa17.11■□□□□ 0.33
PABPN1-202ENST00000397276 ZFAND6Q6FIF0 208 aa17.11■□□□□ 0.33
PABPN1-202ENST00000397276 PYGO1Q9Y3Y4 419 aa17.11■□□□□ 0.33
PABPN1-202ENST00000397276 LEPROTO15243 131 aa17.1■□□□□ 0.33
PABPN1-202ENST00000397276 SS18L2Q9UHA2 77 aa17.1■□□□□ 0.33
PABPN1-202ENST00000397276 FASNP49327 2511 aaKnown RBP17.1■□□□□ 0.33
PABPN1-202ENST00000397276 TRAV8-3A0A0A6YYJ7 113 aa17.1■□□□□ 0.33
PABPN1-202ENST00000397276 RPL35AP18077 110 aaKnown RBP17.1■□□□□ 0.33
PABPN1-202ENST00000397276 Q6ZTI0 123 aa17.1■□□□□ 0.33
PABPN1-202ENST00000397276 TRAV4A0A0B4J268 109 aa17.09■□□□□ 0.33
PABPN1-202ENST00000397276 UBE2D4Q9Y2X8 147 aa17.09■□□□□ 0.33
PABPN1-202ENST00000397276 TEX49A0A1B0GTD5 131 aa17.09■□□□□ 0.33
PABPN1-202ENST00000397276 CITED1Q99966 193 aa17.08■□□□□ 0.33
PABPN1-202ENST00000397276 NHLRC4P0CG21 123 aaPredicted RBP17.08■□□□□ 0.32
PABPN1-202ENST00000397276 C2CD3Q4AC94 2353 aa17.07■□□□□ 0.32
PABPN1-202ENST00000397276 A8MZ25 164 aa17.06■□□□□ 0.32
PABPN1-202ENST00000397276 NOP10Q9NPE3 64 aaKnown RBP17.06■□□□□ 0.32
PABPN1-202ENST00000397276 TMEM262E9PQX1 116 aa17.05■□□□□ 0.32
PABPN1-202ENST00000397276 IGHV3-30-3P0DP02 117 aa17.05■□□□□ 0.32
PABPN1-202ENST00000397276 NPC2P61916 151 aa17.05■□□□□ 0.32
PABPN1-202ENST00000397276 MRPS36P82909 103 aaKnown RBP17.05■□□□□ 0.32
PABPN1-202ENST00000397276 C16orf95Q9H693 158 aa17.05■□□□□ 0.32
PABPN1-202ENST00000397276 SVIPQ8NHG7 77 aa17.05■□□□□ 0.32
PABPN1-202ENST00000397276 TIMM21Q9BVV7 248 aa17.05■□□□□ 0.32
PABPN1-202ENST00000397276 A0A0J9YXY3 114 aa17.04■□□□□ 0.32
PABPN1-202ENST00000397276 B5MCH6 92 aa17.04■□□□□ 0.32
PABPN1-202ENST00000397276 PRSS2P07478 247 aa17.04■□□□□ 0.32
PABPN1-202ENST00000397276 LINC01620Q4KN68 170 aa17.04■□□□□ 0.32
PABPN1-202ENST00000397276 DNAJC30Q96LL9 226 aa17.04■□□□□ 0.32
PABPN1-202ENST00000397276 NOTCH2Q04721 2471 aa17.04■□□□□ 0.32
PABPN1-202ENST00000397276 TRIAP1O43715 76 aa17.04■□□□□ 0.32
PABPN1-202ENST00000397276 GIG44P09565 113 aaPredicted RBP17.03■□□□□ 0.32
PABPN1-202ENST00000397276 HIVEP2P31629 2446 aa17.03■□□□□ 0.32
PABPN1-202ENST00000397276 A0A0B4J2C4 111 aa17.03■□□□□ 0.32
PABPN1-202ENST00000397276 SPANXA1Q9NS26 97 aa17.02■□□□□ 0.32
PABPN1-202ENST00000397276 ADAMTSL4-AS1Q5T5F5 129 aa17.02■□□□□ 0.31
PABPN1-202ENST00000397276 DGAT2L7PQ6IED9 249 aa17.02■□□□□ 0.31
PABPN1-202ENST00000397276 IL17DQ8TAD2 202 aa17.01■□□□□ 0.31
PABPN1-202ENST00000397276 HECTD1Q9ULT8 2610 aa17.01■□□□□ 0.31
PABPN1-202ENST00000397276 IGLV1-51P01701 117 aa17■□□□□ 0.31
PABPN1-202ENST00000397276 HILS1P60008 231 aa17■□□□□ 0.31
PABPN1-202ENST00000397276 GAGE2BQ13066 116 aa17■□□□□ 0.31
PABPN1-202ENST00000397276 ATXN8Q156A1 80 aa17■□□□□ 0.31
PABPN1-202ENST00000397276 GAGE2EQ4V326 116 aa17■□□□□ 0.31
PABPN1-202ENST00000397276 GAGE2DQ9UEU5 116 aa17■□□□□ 0.31
PABPN1-202ENST00000397276 GAGE12JA6NER3 117 aa16.99■□□□□ 0.31
PABPN1-202ENST00000397276 SNCGO76070 127 aa16.99■□□□□ 0.31
PABPN1-202ENST00000397276 GAGE4Q13068 117 aa16.99■□□□□ 0.31
PABPN1-202ENST00000397276 GAGE5Q13069 117 aa16.99■□□□□ 0.31
PABPN1-202ENST00000397276 LITAFQ99732 161 aa16.99■□□□□ 0.31
PABPN1-202ENST00000397276 LINC00694P0DN24 101 aa16.99■□□□□ 0.31
PABPN1-202ENST00000397276 GAGE7O76087 117 aa16.98■□□□□ 0.31
PABPN1-202ENST00000397276 GAGE12FP0CL80 117 aa16.98■□□□□ 0.31
PABPN1-202ENST00000397276 GAGE12GP0CL81 117 aa16.98■□□□□ 0.31
PABPN1-202ENST00000397276 GAGE12IP0CL82 117 aa16.98■□□□□ 0.31
PABPN1-202ENST00000397276 NDUFA7O95182 113 aa16.97■□□□□ 0.31
PABPN1-202ENST00000397276 GAGE6Q13070 117 aa16.97■□□□□ 0.31
PABPN1-202ENST00000397276 TINCRA0A1B0GVN0 87 aa16.97■□□□□ 0.31
PABPN1-202ENST00000397276 K7EQD1 137 aa16.97■□□□□ 0.31
PABPN1-202ENST00000397276 RPL36AP83881 106 aaKnown RBP16.97■□□□□ 0.31
PABPN1-202ENST00000397276 RPL36ALQ969Q0 106 aaKnown RBP16.97■□□□□ 0.31
PABPN1-202ENST00000397276 C19orf73Q9NVV2 129 aa16.97■□□□□ 0.31
PABPN1-202ENST00000397276 KMT2BQ9UMN6 2715 aaPredicted RBP16.97■□□□□ 0.31
PABPN1-202ENST00000397276 IGHV1-58A0A0C4DH39 117 aa16.96■□□□□ 0.31
PABPN1-202ENST00000397276 NDUFV3P56181 108 aaKnown RBP16.96■□□□□ 0.31
PABPN1-202ENST00000397276 TRGV2A0A075B6R0 118 aa16.96■□□□□ 0.31
PABPN1-202ENST00000397276 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.96■□□□□ 0.31
PABPN1-202ENST00000397276 CDKN2A-AS1Q9UH64 79 aa16.96■□□□□ 0.31
PABPN1-202ENST00000397276 CCDC179H3BU77 68 aa16.95■□□□□ 0.3
PABPN1-202ENST00000397276 CLEC2BQ92478 149 aa16.95■□□□□ 0.3
PABPN1-202ENST00000397276 NTM-AS1Q6ZSK4 140 aa16.94■□□□□ 0.3
PABPN1-202ENST00000397276 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.94■□□□□ 0.3
PABPN1-202ENST00000397276 NDUFA12Q9UI09 145 aa16.94■□□□□ 0.3
PABPN1-202ENST00000397276 VSIG2Q96IQ7 327 aa16.94■□□□□ 0.3
PABPN1-202ENST00000397276 GCN1Q92616 2671 aaKnown RBP16.94■□□□□ 0.3
PABPN1-202ENST00000397276 TRBV10-2A0A0K0K1G8 114 aa16.94■□□□□ 0.3
PABPN1-202ENST00000397276 KRTAP10-3P60369 221 aa16.94■□□□□ 0.3
PABPN1-202ENST00000397276 C15orf53Q8NAA6 179 aa16.94■□□□□ 0.3
PABPN1-202ENST00000397276 TRAV8-4A0A0B4J246 113 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms