RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 HIST1H2BOP23527 126 aa6.99□□□□□ -1.29
NUP98-205ENST00000397007 HIST1H2BBP33778 126 aa6.99□□□□□ -1.29
NUP98-205ENST00000397007 HIST1H2BDP58876 126 aa6.99□□□□□ -1.29
NUP98-205ENST00000397007 HIST1H2BCP62807 126 aa6.99□□□□□ -1.29
NUP98-205ENST00000397007 HIST2H2BEQ16778 126 aa6.99□□□□□ -1.29
NUP98-205ENST00000397007 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.99□□□□□ -1.29
NUP98-205ENST00000397007 HIST1H2BHQ93079 126 aa6.99□□□□□ -1.29
NUP98-205ENST00000397007 CHCHD1Q96BP2 118 aaKnown RBP6.99□□□□□ -1.29
NUP98-205ENST00000397007 HIST1H2BNQ99877 126 aa6.99□□□□□ -1.29
NUP98-205ENST00000397007 HIST1H2BMQ99879 126 aa6.99□□□□□ -1.29
NUP98-205ENST00000397007 FOXI1Q12951 378 aa6.99□□□□□ -1.29
NUP98-205ENST00000397007 LINC00336Q6ZUF6 198 aa6.99□□□□□ -1.29
NUP98-205ENST00000397007 NUPR1O60356 82 aa6.98□□□□□ -1.29
NUP98-205ENST00000397007 ORMDL2Q53FV1 153 aa6.98□□□□□ -1.29
NUP98-205ENST00000397007 UBE2DNLQ8IWF7 75 aa6.98□□□□□ -1.29
NUP98-205ENST00000397007 ZNF664Q8N3J9 261 aa6.98□□□□□ -1.29
NUP98-205ENST00000397007 NTN5Q8WTR8 489 aaPredicted RBP6.98□□□□□ -1.29
NUP98-205ENST00000397007 KIR2DL4Q99706 377 aa6.98□□□□□ -1.29
NUP98-205ENST00000397007 IGLV5-45A0A087WSX0 123 aa6.98□□□□□ -1.29
NUP98-205ENST00000397007 FCER1GP30273 86 aa6.98□□□□□ -1.29
NUP98-205ENST00000397007 MIAQ16674 131 aa6.98□□□□□ -1.29
NUP98-205ENST00000397007 GAGE6Q13070 117 aa6.97□□□□□ -1.29
NUP98-205ENST00000397007 WFDC2Q14508 124 aa6.97□□□□□ -1.29
NUP98-205ENST00000397007 CCL25O15444 150 aa6.97□□□□□ -1.29
NUP98-205ENST00000397007 LINC00614P0C842 121 aa6.97□□□□□ -1.29
NUP98-205ENST00000397007 Q6ZUT4 128 aa6.97□□□□□ -1.29
NUP98-205ENST00000397007 PACRGQ96M98 296 aaPredicted RBP6.97□□□□□ -1.29
NUP98-205ENST00000397007 TRAV8-4A0A0B4J246 113 aa6.96□□□□□ -1.29
NUP98-205ENST00000397007 LINC01549A6NIU2 74 aa6.96□□□□□ -1.29
NUP98-205ENST00000397007 IGHV3-30P01768 117 aa6.96□□□□□ -1.29
NUP98-205ENST00000397007 IGHV3-33P01772 117 aa6.96□□□□□ -1.29
NUP98-205ENST00000397007 IGHV3-30-3P0DP02 117 aa6.96□□□□□ -1.29
NUP98-205ENST00000397007 IGHV3-30-5P0DP03 117 aa6.96□□□□□ -1.29
NUP98-205ENST00000397007 UBE2D1P51668 147 aa6.96□□□□□ -1.3
NUP98-205ENST00000397007 C1orf134Q5TEV5 83 aa6.96□□□□□ -1.3
NUP98-205ENST00000397007 C2orf66Q6UXQ4 117 aa6.96□□□□□ -1.3
NUP98-205ENST00000397007 NFE4Q86UQ8 179 aa6.96□□□□□ -1.3
NUP98-205ENST00000397007 TRAV8-3A0A0A6YYJ7 113 aa6.96□□□□□ -1.3
NUP98-205ENST00000397007 LINC00959A0A1B0GUT2 108 aa6.96□□□□□ -1.3
NUP98-205ENST00000397007 TNP2Q05952 138 aa6.96□□□□□ -1.3
NUP98-205ENST00000397007 REG3AQ06141 175 aa6.96□□□□□ -1.3
NUP98-205ENST00000397007 LINC00269Q8N2A0 174 aa6.96□□□□□ -1.3
NUP98-205ENST00000397007 C15orf56Q8N910 161 aa6.95□□□□□ -1.3
NUP98-205ENST00000397007 DEFB104AQ8WTQ1 72 aa6.95□□□□□ -1.3
NUP98-205ENST00000397007 TRAV9-2A0A087WT02 112 aa6.95□□□□□ -1.3
NUP98-205ENST00000397007 LINC01561Q8N1V8 128 aa6.95□□□□□ -1.3
NUP98-205ENST00000397007 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.95□□□□□ -1.3
NUP98-205ENST00000397007 A0A087WTM6 91 aa6.94□□□□□ -1.3
NUP98-205ENST00000397007 IGHV3OR16-9A0A0B4J2B5 98 aa6.94□□□□□ -1.3
NUP98-205ENST00000397007 ERASQ7Z444 233 aa6.94□□□□□ -1.3
NUP98-205ENST00000397007 CHCHD5Q9BSY4 110 aa6.94□□□□□ -1.3
NUP98-205ENST00000397007 KLK12Q9UKR0 248 aa6.94□□□□□ -1.3
NUP98-205ENST00000397007 LOC389332A0A1B0GUA5 103 aa6.94□□□□□ -1.3
NUP98-205ENST00000397007 TMEM141Q96I45 108 aa6.94□□□□□ -1.3
NUP98-205ENST00000397007 EPM2AB3EWF7 344 aa6.94□□□□□ -1.3
NUP98-205ENST00000397007 OPRPNQ99935 248 aaPredicted RBP6.94□□□□□ -1.3
NUP98-205ENST00000397007 IGLV4-69A0A075B6H9 119 aa6.93□□□□□ -1.3
NUP98-205ENST00000397007 M0R2N4 97 aa6.93□□□□□ -1.3
NUP98-205ENST00000397007 LINC00242Q5T6M2 205 aa6.92□□□□□ -1.3
NUP98-205ENST00000397007 BAALCQ8WXS3 180 aa6.92□□□□□ -1.3
NUP98-205ENST00000397007 Q8N814 137 aa6.92□□□□□ -1.3
NUP98-205ENST00000397007 AP5S1Q9NUS5 200 aa6.92□□□□□ -1.3
NUP98-205ENST00000397007 CYSLTR1Q9Y271 337 aa6.92□□□□□ -1.3
NUP98-205ENST00000397007 GVQW2A0A096LPI5 108 aaPredicted RBP6.92□□□□□ -1.3
NUP98-205ENST00000397007 SLPIP03973 132 aa6.92□□□□□ -1.3
NUP98-205ENST00000397007 SERF1AO75920 110 aa6.91□□□□□ -1.3
NUP98-205ENST00000397007 COX11Q9Y6N1 276 aa6.91□□□□□ -1.3
NUP98-205ENST00000397007 IGLC3P0DOY3 106 aa6.91□□□□□ -1.3
NUP98-205ENST00000397007 KRTAP10-2P60368 255 aa6.91□□□□□ -1.3
NUP98-205ENST00000397007 CNBPP62633 177 aaKnown RBP6.91□□□□□ -1.3
NUP98-205ENST00000397007 Q6ZSA8 131 aa6.91□□□□□ -1.3
NUP98-205ENST00000397007 TMEM18Q96B42 140 aa6.91□□□□□ -1.3
NUP98-205ENST00000397007 TRAV12-1A0A0B4J245 112 aa6.91□□□□□ -1.3
NUP98-205ENST00000397007 HBDP02042 147 aa6.91□□□□□ -1.3
NUP98-205ENST00000397007 COX6A2Q02221 97 aa6.91□□□□□ -1.3
NUP98-205ENST00000397007 ANGP03950 147 aaKnown RBP6.9□□□□□ -1.3
NUP98-205ENST00000397007 G0S2P27469 103 aa6.9□□□□□ -1.3
NUP98-205ENST00000397007 CD164L2Q6UWJ8 174 aa6.9□□□□□ -1.3
NUP98-205ENST00000397007 KIAA1109Q2LD37 5005 aa6.9□□□□□ -1.3
NUP98-205ENST00000397007 IFITM10A6NMD0 228 aa6.9□□□□□ -1.3
NUP98-205ENST00000397007 RAB5BP61020 215 aa6.9□□□□□ -1.3
NUP98-205ENST00000397007 KRTAP17-1Q9BYP8 105 aa6.9□□□□□ -1.3
NUP98-205ENST00000397007 CST9LQ9H4G1 147 aa6.9□□□□□ -1.3
NUP98-205ENST00000397007 A0A087WX48 190 aa6.9□□□□□ -1.31
NUP98-205ENST00000397007 KIAA0087Q14695 138 aa6.9□□□□□ -1.31
NUP98-205ENST00000397007 SPATA12Q7Z6I5 190 aa6.9□□□□□ -1.31
NUP98-205ENST00000397007 PRSS29PA6NIE9 313 aa6.89□□□□□ -1.31
NUP98-205ENST00000397007 UBE2L6O14933 153 aa6.89□□□□□ -1.31
NUP98-205ENST00000397007 CHCHD10Q8WYQ3 142 aaPredicted RBP6.89□□□□□ -1.31
NUP98-205ENST00000397007 SMAGPQ0VAQ4 97 aa6.89□□□□□ -1.31
NUP98-205ENST00000397007 CIRBPQ14011 172 aaKnown RBP6.89□□□□□ -1.31
NUP98-205ENST00000397007 PRSS3P2Q8NHM4 247 aa6.89□□□□□ -1.31
NUP98-205ENST00000397007 A0A087WZ39 114 aa6.89□□□□□ -1.31
NUP98-205ENST00000397007 PRSS1P07477 247 aa6.88□□□□□ -1.31
NUP98-205ENST00000397007 PMCHL1Q16048 86 aa6.88□□□□□ -1.31
NUP98-205ENST00000397007 ZC2HC1BQ5TFG8 222 aa6.88□□□□□ -1.31
NUP98-205ENST00000397007 TINCRA0A1B0GVN0 87 aa6.88□□□□□ -1.31
NUP98-205ENST00000397007 CDPF1Q6NVV7 123 aa6.88□□□□□ -1.31
NUP98-205ENST00000397007 UBE2WQ96B02 151 aa6.88□□□□□ -1.31
NUP98-205ENST00000397007 TM2D2Q9BX73 214 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms