RNA–Protein interactions for RNA: ENST00000380821.7

SNAPC3-202, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 5,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-202ENST00000380821 C11orf21Q9P2W6 132 aa12.63□□□□□ -0.39
SNAPC3-202ENST00000380821 MALRD1Q5VYJ5 2156 aa12.63□□□□□ -0.39
SNAPC3-202ENST00000380821 MUC7Q8TAX7 377 aa12.63□□□□□ -0.39
SNAPC3-202ENST00000380821 LTBP2Q14767 1821 aa12.63□□□□□ -0.39
SNAPC3-202ENST00000380821 AKAP6Q13023 2319 aa12.62□□□□□ -0.39
SNAPC3-202ENST00000380821 DCANP1Q8TF63 244 aa12.62□□□□□ -0.39
SNAPC3-202ENST00000380821 K7ERS5 55 aa12.62□□□□□ -0.39
SNAPC3-202ENST00000380821 SYCNQ0VAF6 134 aa12.62□□□□□ -0.39
SNAPC3-202ENST00000380821 C1orf158Q8N1D5 194 aa12.62□□□□□ -0.39
SNAPC3-202ENST00000380821 XAGE1AQ9HD64 81 aa12.61□□□□□ -0.39
SNAPC3-202ENST00000380821 C3orf84H3BNL1 204 aa12.61□□□□□ -0.39
SNAPC3-202ENST00000380821 SHANK1Q9Y566 2161 aa12.6□□□□□ -0.39
SNAPC3-202ENST00000380821 C11orf71Q6IPW1 123 aa12.6□□□□□ -0.39
SNAPC3-202ENST00000380821 ALPK3Q96L96 1907 aa12.6□□□□□ -0.39
SNAPC3-202ENST00000380821 LINC00310P59036 64 aa12.6□□□□□ -0.39
SNAPC3-202ENST00000380821 Q6ZQY7 126 aa12.6□□□□□ -0.39
SNAPC3-202ENST00000380821 LINC00959A0A1B0GUT2 108 aa12.59□□□□□ -0.39
SNAPC3-202ENST00000380821 USF3Q68DE3 2245 aa12.59□□□□□ -0.39
SNAPC3-202ENST00000380821 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.59□□□□□ -0.39
SNAPC3-202ENST00000380821 SOSTDC1Q6X4U4 206 aa12.59□□□□□ -0.39
SNAPC3-202ENST00000380821 DEFB131BA0A096LNP1 70 aa12.58□□□□□ -0.39
SNAPC3-202ENST00000380821 C2orf16Q68DN1 1984 aa12.58□□□□□ -0.4
SNAPC3-202ENST00000380821 HILS1P60008 231 aa12.58□□□□□ -0.4
SNAPC3-202ENST00000380821 NACAE9PAV3 2078 aa12.58□□□□□ -0.4
SNAPC3-202ENST00000380821 A0A087WZ39 114 aa12.58□□□□□ -0.4
SNAPC3-202ENST00000380821 PKDREJQ9NTG1 2253 aa12.58□□□□□ -0.4
SNAPC3-202ENST00000380821 IGIPA6NJ69 53 aa12.57□□□□□ -0.4
SNAPC3-202ENST00000380821 C22orf34Q6ZV56 151 aa12.57□□□□□ -0.4
SNAPC3-202ENST00000380821 NCOR1O75376 2440 aa12.57□□□□□ -0.4
SNAPC3-202ENST00000380821 PSMG3-AS1Q96PY0 264 aa12.57□□□□□ -0.4
SNAPC3-202ENST00000380821 MED13Q9UHV7 2174 aa12.57□□□□□ -0.4
SNAPC3-202ENST00000380821 LINC00526Q96FQ7 95 aa12.57□□□□□ -0.4
SNAPC3-202ENST00000380821 SERTAD4-AS1Q5TG53 156 aa12.57□□□□□ -0.4
SNAPC3-202ENST00000380821 GAS8-AS1O95177 125 aa12.56□□□□□ -0.4
SNAPC3-202ENST00000380821 Q8IZM0 81 aa12.56□□□□□ -0.4
SNAPC3-202ENST00000380821 URB1-AS1Q96HZ7 61 aa12.56□□□□□ -0.4
SNAPC3-202ENST00000380821 DOCK7Q96N67 2140 aa12.56□□□□□ -0.4
SNAPC3-202ENST00000380821 POLEQ07864 2286 aa12.55□□□□□ -0.4
SNAPC3-202ENST00000380821 C19orf84I3L1E1 186 aa12.55□□□□□ -0.4
SNAPC3-202ENST00000380821 MRGPRG-AS1Q2M3A8 158 aa12.55□□□□□ -0.4
SNAPC3-202ENST00000380821 BBC3Q96PG8 261 aaPredicted RBP12.55□□□□□ -0.4
SNAPC3-202ENST00000380821 ZNF706Q9Y5V0 76 aaPredicted RBP12.55□□□□□ -0.4
SNAPC3-202ENST00000380821 A0A096LNI7 61 aa12.55□□□□□ -0.4
SNAPC3-202ENST00000380821 POM121L12Q8N7R1 296 aa12.55□□□□□ -0.4
SNAPC3-202ENST00000380821 IGLV4-69A0A075B6H9 119 aa12.54□□□□□ -0.4
SNAPC3-202ENST00000380821 ZNF73O43830 326 aaPredicted RBP12.54□□□□□ -0.4
SNAPC3-202ENST00000380821 ZNF702PQ9H963 129 aa12.54□□□□□ -0.4
SNAPC3-202ENST00000380821 TRAV7A0A075B6U4 112 aa12.54□□□□□ -0.4
SNAPC3-202ENST00000380821 LELP1Q5T871 98 aa12.53□□□□□ -0.4
SNAPC3-202ENST00000380821 PRORYQ9H606 182 aa12.53□□□□□ -0.4
SNAPC3-202ENST00000380821 ARHGAP21Q5T5U3 1957 aa12.53□□□□□ -0.4
SNAPC3-202ENST00000380821 Q6ZSV7 163 aa12.53□□□□□ -0.4
SNAPC3-202ENST00000380821 IGLV1-40P01703 118 aa12.53□□□□□ -0.4
SNAPC3-202ENST00000380821 UBE2D3P61077 147 aa12.52□□□□□ -0.4
SNAPC3-202ENST00000380821 UBE2D2P62837 147 aa12.52□□□□□ -0.4
SNAPC3-202ENST00000380821 CDC42SE2Q9NRR3 84 aa12.52□□□□□ -0.4
SNAPC3-202ENST00000380821 GTF3C1Q12789 2109 aa12.52□□□□□ -0.4
SNAPC3-202ENST00000380821 IGKV2-28A0A075B6P5 120 aa12.52□□□□□ -0.41
SNAPC3-202ENST00000380821 IGKV2D-28P01615 120 aa12.52□□□□□ -0.41
SNAPC3-202ENST00000380821 WFDC13Q8IUB5 93 aa12.52□□□□□ -0.41
SNAPC3-202ENST00000380821 COL4A4P53420 1690 aaPredicted RBP12.52□□□□□ -0.41
SNAPC3-202ENST00000380821 FAM30AQ9NZY2 134 aa12.5□□□□□ -0.41
SNAPC3-202ENST00000380821 C10orf99Q6UWK7 81 aa12.5□□□□□ -0.41
SNAPC3-202ENST00000380821 LOC100131303A0A0U1RQF7 123 aa12.5□□□□□ -0.41
SNAPC3-202ENST00000380821 RPL28P46779 137 aaKnown RBP12.49□□□□□ -0.41
SNAPC3-202ENST00000380821 DOCK10Q96BY6 2186 aa12.49□□□□□ -0.41
SNAPC3-202ENST00000380821 Q8N9L7 120 aa12.48□□□□□ -0.41
SNAPC3-202ENST00000380821 LRCOL1A6NCL2 159 aa12.48□□□□□ -0.41
SNAPC3-202ENST00000380821 PRR4Q16378 134 aa12.48□□□□□ -0.41
SNAPC3-202ENST00000380821 NTM-AS1Q6ZSK4 140 aa12.48□□□□□ -0.41
SNAPC3-202ENST00000380821 TRAV10A0A0B4J240 114 aa12.47□□□□□ -0.41
SNAPC3-202ENST00000380821 A0A0J9YWU9 116 aa12.47□□□□□ -0.41
SNAPC3-202ENST00000380821 LINC00482Q8N8I6 264 aa12.47□□□□□ -0.41
SNAPC3-202ENST00000380821 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.47□□□□□ -0.41
SNAPC3-202ENST00000380821 Q8N814 137 aa12.47□□□□□ -0.41
SNAPC3-202ENST00000380821 ROS1P08922 2347 aa12.47□□□□□ -0.41
SNAPC3-202ENST00000380821 SPTBN1Q01082 2364 aaKnown RBP12.46□□□□□ -0.41
SNAPC3-202ENST00000380821 LINC00242Q5T6M2 205 aa12.46□□□□□ -0.42
SNAPC3-202ENST00000380821 MUC22E2RYF6 1773 aaPredicted RBP12.44□□□□□ -0.42
SNAPC3-202ENST00000380821 OXLD1Q5BKU9 147 aa12.44□□□□□ -0.42
SNAPC3-202ENST00000380821 COX8CQ7Z4L0 72 aa12.44□□□□□ -0.42
SNAPC3-202ENST00000380821 SMIM1B2RUZ4 78 aa12.44□□□□□ -0.42
SNAPC3-202ENST00000380821 CHCHD7Q9BUK0 85 aa12.44□□□□□ -0.42
SNAPC3-202ENST00000380821 WNK2Q9Y3S1 2297 aa12.43□□□□□ -0.42
SNAPC3-202ENST00000380821 CRIP2P52943 208 aaPredicted RBP12.43□□□□□ -0.42
SNAPC3-202ENST00000380821 TSPEAR-AS2P59090 65 aa12.42□□□□□ -0.42
SNAPC3-202ENST00000380821 C7orf33Q8WU49 177 aa12.42□□□□□ -0.42
SNAPC3-202ENST00000380821 ATG2AQ2TAZ0 1938 aa12.42□□□□□ -0.42
SNAPC3-202ENST00000380821 PSPHP1O15172 72 aa12.42□□□□□ -0.42
SNAPC3-202ENST00000380821 KPRPQ5T749 579 aaPredicted RBP12.42□□□□□ -0.42
SNAPC3-202ENST00000380821 CADP27708 2225 aa12.41□□□□□ -0.42
SNAPC3-202ENST00000380821 A0A087WYN8 130 aa12.41□□□□□ -0.42
SNAPC3-202ENST00000380821 COL6A6A6NMZ7 2263 aa12.41□□□□□ -0.42
SNAPC3-202ENST00000380821 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.4□□□□□ -0.42
SNAPC3-202ENST00000380821 RPL37AP8A6NKH3 93 aa12.4□□□□□ -0.42
SNAPC3-202ENST00000380821 CYSRT1A8MQ03 144 aa12.4□□□□□ -0.42
SNAPC3-202ENST00000380821 C4orf26Q17RF5 130 aa12.4□□□□□ -0.42
SNAPC3-202ENST00000380821 PRYO14603 147 aa12.4□□□□□ -0.43
SNAPC3-202ENST00000380821 AMELXQ99217 191 aa12.39□□□□□ -0.43
SNAPC3-202ENST00000380821 C18orf65Q6ZTR6 163 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms