RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 SDHAF1A6NFY7 115 aa10.28□□□□□ -0.76
HMGN1-203ENST00000380748 SFT2D1Q8WV19 159 aa10.28□□□□□ -0.76
HMGN1-203ENST00000380748 CRCT1Q9UGL9 99 aa10.28□□□□□ -0.76
HMGN1-203ENST00000380748 COX7A2LO14548 114 aa10.27□□□□□ -0.77
HMGN1-203ENST00000380748 TWIST1Q15672 202 aa10.27□□□□□ -0.77
HMGN1-203ENST00000380748 CENPWQ5EE01 88 aa10.27□□□□□ -0.77
HMGN1-203ENST00000380748 C2orf48Q96LS8 159 aa10.27□□□□□ -0.77
HMGN1-203ENST00000380748 CDC42SE2Q9NRR3 84 aa10.27□□□□□ -0.77
HMGN1-203ENST00000380748 NDUFA13Q9P0J0 144 aa10.27□□□□□ -0.77
HMGN1-203ENST00000380748 XKRY2A2RUG3 117 aa10.26□□□□□ -0.77
HMGN1-203ENST00000380748 IFNA1P01562 189 aa10.26□□□□□ -0.77
HMGN1-203ENST00000380748 ESDP10768 282 aa10.26□□□□□ -0.77
HMGN1-203ENST00000380748 CTRLP40313 264 aa10.26□□□□□ -0.77
HMGN1-203ENST00000380748 FAM19A5Q7Z5A7 132 aaPredicted RBP10.26□□□□□ -0.77
HMGN1-203ENST00000380748 TSKUQ8WUA8 353 aa10.26□□□□□ -0.77
HMGN1-203ENST00000380748 CYTL1Q9NRR1 136 aa10.26□□□□□ -0.77
HMGN1-203ENST00000380748 C9orf62Q8N4C0 152 aa10.25□□□□□ -0.77
HMGN1-203ENST00000380748 KCNRGQ8N5I3 272 aa10.25□□□□□ -0.77
HMGN1-203ENST00000380748 FAM213BQ8TBF2 198 aa10.25□□□□□ -0.77
HMGN1-203ENST00000380748 MBD3L1Q8WWY6 194 aa10.25□□□□□ -0.77
HMGN1-203ENST00000380748 CARHSP1Q9Y2V2 147 aaKnown RBP10.25□□□□□ -0.77
HMGN1-203ENST00000380748 I3L3M4 83 aa10.24□□□□□ -0.77
HMGN1-203ENST00000380748 PMCHP20382 165 aa10.24□□□□□ -0.77
HMGN1-203ENST00000380748 FOXA3P55318 350 aaPredicted RBP10.24□□□□□ -0.77
HMGN1-203ENST00000380748 MRAP2Q96G30 205 aa10.24□□□□□ -0.77
HMGN1-203ENST00000380748 TSHBP01222 138 aa10.23□□□□□ -0.77
HMGN1-203ENST00000380748 GIPP09681 153 aaPredicted RBP10.23□□□□□ -0.77
HMGN1-203ENST00000380748 SPAG11BQ08648 103 aa10.23□□□□□ -0.77
HMGN1-203ENST00000380748 RNF151Q2KHN1 245 aa10.23□□□□□ -0.77
HMGN1-203ENST00000380748 MRPL52Q86TS9 123 aaKnown RBP10.23□□□□□ -0.77
HMGN1-203ENST00000380748 C11orf52Q96A22 123 aa10.23□□□□□ -0.77
HMGN1-203ENST00000380748 CNFNQ9BYD5 112 aa10.23□□□□□ -0.77
HMGN1-203ENST00000380748 TMEM242Q9NWH2 141 aa10.23□□□□□ -0.77
HMGN1-203ENST00000380748 C5orf38Q86SI9 138 aa10.22□□□□□ -0.77
HMGN1-203ENST00000380748 KRTAP7-1Q8IUC3 87 aa10.22□□□□□ -0.77
HMGN1-203ENST00000380748 RAB19A4D1S5 217 aa10.21□□□□□ -0.77
HMGN1-203ENST00000380748 C1orf196B1AJZ1 125 aa10.21□□□□□ -0.77
HMGN1-203ENST00000380748 RPP21Q9H633 154 aaKnown RBP10.21□□□□□ -0.77
HMGN1-203ENST00000380748 G3V3Q6 166 aa10.2□□□□□ -0.78
HMGN1-203ENST00000380748 UBE2BP63146 152 aa10.2□□□□□ -0.78
HMGN1-203ENST00000380748 RNASE13Q5GAN3 156 aaKnown RBP10.2□□□□□ -0.78
HMGN1-203ENST00000380748 M0QXV9 152 aa10.19□□□□□ -0.78
HMGN1-203ENST00000380748 GNG4P50150 75 aa10.19□□□□□ -0.78
HMGN1-203ENST00000380748 RNASE7Q9H1E1 156 aaKnown RBP10.19□□□□□ -0.78
HMGN1-203ENST00000380748 MRPL35Q9NZE8 188 aaKnown RBP10.19□□□□□ -0.78
HMGN1-203ENST00000380748 TRAV13-1A0A0B4J241 112 aa10.18□□□□□ -0.78
HMGN1-203ENST00000380748 TRBV6-5A0A0K0K1A5 114 aa10.18□□□□□ -0.78
HMGN1-203ENST00000380748 C10orf25Q5T742 122 aa10.18□□□□□ -0.78
HMGN1-203ENST00000380748 TEX261Q6UWH6 196 aa10.18□□□□□ -0.78
HMGN1-203ENST00000380748 IMMP2LQ96T52 175 aa10.18□□□□□ -0.78
HMGN1-203ENST00000380748 RETNLBQ9BQ08 111 aa10.18□□□□□ -0.78
HMGN1-203ENST00000380748 TRBV20OR9-2A0A075B6H5 130 aa10.17□□□□□ -0.78
HMGN1-203ENST00000380748 A0A087X002 238 aa10.17□□□□□ -0.78
HMGN1-203ENST00000380748 ARPC5O15511 151 aa10.17□□□□□ -0.78
HMGN1-203ENST00000380748 CCL20P78556 96 aa10.17□□□□□ -0.78
HMGN1-203ENST00000380748 GAGE2EQ4V326 116 aa10.17□□□□□ -0.78
HMGN1-203ENST00000380748 NUDT10Q8NFP7 164 aa10.17□□□□□ -0.78
HMGN1-203ENST00000380748 SMIM12Q96EX1 92 aa10.17□□□□□ -0.78
HMGN1-203ENST00000380748 NUDT11Q96G61 164 aa10.17□□□□□ -0.78
HMGN1-203ENST00000380748 GNG13Q9P2W3 67 aa10.17□□□□□ -0.78
HMGN1-203ENST00000380748 GAGE2DQ9UEU5 116 aa10.17□□□□□ -0.78
HMGN1-203ENST00000380748 C7orf77A4D0Y5 90 aa10.16□□□□□ -0.78
HMGN1-203ENST00000380748 H2AFB1P0C5Y9 115 aa10.16□□□□□ -0.78
HMGN1-203ENST00000380748 SMIM15Q7Z3B0 74 aa10.16□□□□□ -0.78
HMGN1-203ENST00000380748 CDIP1Q9H305 208 aa10.16□□□□□ -0.78
HMGN1-203ENST00000380748 UMAD1C9J7I0 102 aa10.15□□□□□ -0.78
HMGN1-203ENST00000380748 ZNF861PO60384 105 aa10.15□□□□□ -0.78
HMGN1-203ENST00000380748 TLX1NBP0CAT3 122 aa10.15□□□□□ -0.78
HMGN1-203ENST00000380748 OR10D4PQ8NGN7 298 aa10.15□□□□□ -0.78
HMGN1-203ENST00000380748 ST20Q9HBF5 79 aa10.15□□□□□ -0.78
HMGN1-203ENST00000380748 NDUFA1O15239 70 aa10.14□□□□□ -0.79
HMGN1-203ENST00000380748 UNQ6190/PRO20217Q6UXQ8 127 aa10.14□□□□□ -0.79
HMGN1-203ENST00000380748 ORAOV1Q8WV07 137 aa10.14□□□□□ -0.79
HMGN1-203ENST00000380748 SMDT1Q9H4I9 107 aa10.14□□□□□ -0.79
HMGN1-203ENST00000380748 MANBALQ9NQG1 85 aa10.14□□□□□ -0.79
HMGN1-203ENST00000380748 C6orf48Q9UBA6 75 aa10.14□□□□□ -0.79
HMGN1-203ENST00000380748 TYMSOSQ8TAI1 123 aa10.13□□□□□ -0.79
HMGN1-203ENST00000380748 POLR2KP53803 58 aaKnown RBP10.12□□□□□ -0.79
HMGN1-203ENST00000380748 TPRXLQ17RH7 258 aa10.12□□□□□ -0.79
HMGN1-203ENST00000380748 Q6ZUT4 128 aa10.12□□□□□ -0.79
HMGN1-203ENST00000380748 FAM210AQ96ND0 272 aa10.12□□□□□ -0.79
HMGN1-203ENST00000380748 BIN3Q9NQY0 253 aa10.12□□□□□ -0.79
HMGN1-203ENST00000380748 UBE2D4Q9Y2X8 147 aa10.12□□□□□ -0.79
HMGN1-203ENST00000380748 TRBV27A0A0K0K1C4 114 aa10.11□□□□□ -0.79
HMGN1-203ENST00000380748 CSDC2Q9Y534 153 aaKnown RBP10.11□□□□□ -0.79
HMGN1-203ENST00000380748 F8WDY8 70 aa10.1□□□□□ -0.79
HMGN1-203ENST00000380748 TMEM241Q24JQ0 296 aa10.09□□□□□ -0.79
HMGN1-203ENST00000380748 CRYGAP11844 174 aa10.08□□□□□ -0.8
HMGN1-203ENST00000380748 C9orf129Q5T035 196 aaKnown RBP10.08□□□□□ -0.8
HMGN1-203ENST00000380748 MED9Q9NWA0 146 aa10.08□□□□□ -0.8
HMGN1-203ENST00000380748 K7EN84 100 aa10.07□□□□□ -0.8
HMGN1-203ENST00000380748 FCER1GP30273 86 aa10.07□□□□□ -0.8
HMGN1-203ENST00000380748 IGLV7-46A0A075B6I9 117 aa10.06□□□□□ -0.8
HMGN1-203ENST00000380748 IGHV3OR16-9A0A0B4J2B5 98 aa10.06□□□□□ -0.8
HMGN1-203ENST00000380748 LINC01547P58512 204 aaPredicted RBP10.06□□□□□ -0.8
HMGN1-203ENST00000380748 ANAPC11Q9NYG5 84 aa10.06□□□□□ -0.8
HMGN1-203ENST00000380748 SMLR1H3BR10 107 aa10.05□□□□□ -0.8
HMGN1-203ENST00000380748 PDE6DO43924 150 aa10.05□□□□□ -0.8
HMGN1-203ENST00000380748 SMAGPQ0VAQ4 97 aa10.05□□□□□ -0.8
HMGN1-203ENST00000380748 CTDSP1Q9GZU7 261 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms