RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 TIMM17AQ99595 171 aa10.15□□□□□ -0.78
MSH5-202ENST00000375740 CUBNO60494 3623 aa10.15□□□□□ -0.78
MSH5-202ENST00000375740 I3L3M4 83 aa10.14□□□□□ -0.79
MSH5-202ENST00000375740 INSP01308 110 aa10.14□□□□□ -0.79
MSH5-202ENST00000375740 LINC01620Q4KN68 170 aa10.14□□□□□ -0.79
MSH5-202ENST00000375740 MUSTN1Q8IVN3 82 aa10.14□□□□□ -0.79
MSH5-202ENST00000375740 OPRPNQ99935 248 aaPredicted RBP10.14□□□□□ -0.79
MSH5-202ENST00000375740 XCL2Q9UBD3 114 aa10.14□□□□□ -0.79
MSH5-202ENST00000375740 WNK1Q9H4A3 2382 aa10.14□□□□□ -0.79
MSH5-202ENST00000375740 J3QQQ9 107 aa10.14□□□□□ -0.79
MSH5-202ENST00000375740 HERVK_113P61574 105 aa10.14□□□□□ -0.79
MSH5-202ENST00000375740 RHOHQ15669 191 aa10.14□□□□□ -0.79
MSH5-202ENST00000375740 NSUN5P1Q3KNT7 163 aa10.14□□□□□ -0.79
MSH5-202ENST00000375740 C11orf72Q8NBR9 251 aa10.14□□□□□ -0.79
MSH5-202ENST00000375740 ITPR2Q14571 2701 aa10.14□□□□□ -0.79
MSH5-202ENST00000375740 TRAV8-4A0A0B4J246 113 aa10.13□□□□□ -0.79
MSH5-202ENST00000375740 MEIG1Q5JSS6 88 aa10.13□□□□□ -0.79
MSH5-202ENST00000375740 STHQ8IWL8 128 aa10.13□□□□□ -0.79
MSH5-202ENST00000375740 LINC00467Q9BRT7 94 aa10.13□□□□□ -0.79
MSH5-202ENST00000375740 CHCHD5Q9BSY4 110 aa10.13□□□□□ -0.79
MSH5-202ENST00000375740 Q1RN00 199 aa10.12□□□□□ -0.79
MSH5-202ENST00000375740 Q6ZSN1 163 aa10.12□□□□□ -0.79
MSH5-202ENST00000375740 SMR3AQ99954 134 aa10.12□□□□□ -0.79
MSH5-202ENST00000375740 EDA2RQ9HAV5 297 aa10.12□□□□□ -0.79
MSH5-202ENST00000375740 PIK3CD-AS1Q5SR53 167 aa10.11□□□□□ -0.79
MSH5-202ENST00000375740 Q6Q795 121 aa10.11□□□□□ -0.79
MSH5-202ENST00000375740 C20orf203Q8NBC4 194 aa10.11□□□□□ -0.79
MSH5-202ENST00000375740 Q9UF83 564 aa10.11□□□□□ -0.79
MSH5-202ENST00000375740 NACAE9PAV3 2078 aa10.11□□□□□ -0.79
MSH5-202ENST00000375740 HELZ2Q9BYK8 2649 aaKnown RBP10.11□□□□□ -0.79
MSH5-202ENST00000375740 LGALS3P17931 250 aaKnown RBP10.1□□□□□ -0.79
MSH5-202ENST00000375740 PAPPA-AS1Q5QFB9 102 aa10.1□□□□□ -0.79
MSH5-202ENST00000375740 C1orf158Q8N1D5 194 aa10.1□□□□□ -0.79
MSH5-202ENST00000375740 SPXQ9BT56 116 aa10.1□□□□□ -0.79
MSH5-202ENST00000375740 TNFRSF18Q9Y5U5 241 aa10.1□□□□□ -0.79
MSH5-202ENST00000375740 IGHV3OR16-12A0A075B7B8 117 aa10.1□□□□□ -0.79
MSH5-202ENST00000375740 M0QXV9 152 aa10.1□□□□□ -0.79
MSH5-202ENST00000375740 TRIAP1O43715 76 aa10.1□□□□□ -0.79
MSH5-202ENST00000375740 HILS1P60008 231 aa10.1□□□□□ -0.79
MSH5-202ENST00000375740 ADARB2-AS1A8MUL3 147 aa10.1□□□□□ -0.79
MSH5-202ENST00000375740 PPDPFQ9H3Y8 114 aa10.1□□□□□ -0.79
MSH5-202ENST00000375740 ATXN8Q156A1 80 aa10.09□□□□□ -0.79
MSH5-202ENST00000375740 BEAN1Q3B7T3 259 aa10.09□□□□□ -0.79
MSH5-202ENST00000375740 TRBV10-2A0A0K0K1G8 114 aa10.08□□□□□ -0.8
MSH5-202ENST00000375740 RPL13AP40429 203 aaKnown RBP10.08□□□□□ -0.8
MSH5-202ENST00000375740 UBE2WQ96B02 151 aa10.08□□□□□ -0.8
MSH5-202ENST00000375740 A0A0B4J2C4 111 aa10.08□□□□□ -0.8
MSH5-202ENST00000375740 H7C423 109 aa10.07□□□□□ -0.8
MSH5-202ENST00000375740 RS1O15537 224 aa10.07□□□□□ -0.8
MSH5-202ENST00000375740 C2orf82Q6UX34 121 aa10.07□□□□□ -0.8
MSH5-202ENST00000375740 UNC79Q9P2D8 2635 aa10.07□□□□□ -0.8
MSH5-202ENST00000375740 IGLV4-3A0A075B6K6 122 aa10.06□□□□□ -0.8
MSH5-202ENST00000375740 NDUFA7O95182 113 aa10.06□□□□□ -0.8
MSH5-202ENST00000375740 IGHV3-53P01767 116 aa10.06□□□□□ -0.8
MSH5-202ENST00000375740 CLEC2BQ92478 149 aa10.06□□□□□ -0.8
MSH5-202ENST00000375740 MTORP42345 2549 aa10.06□□□□□ -0.8
MSH5-202ENST00000375740 SETD2Q9BYW2 2564 aaPredicted RBP10.05□□□□□ -0.8
MSH5-202ENST00000375740 TMEM223A0PJW6 202 aa10.05□□□□□ -0.8
MSH5-202ENST00000375740 IGLV1-51P01701 117 aa10.05□□□□□ -0.8
MSH5-202ENST00000375740 ZNF22P17026 224 aaPredicted RBP10.05□□□□□ -0.8
MSH5-202ENST00000375740 CMC4P56277 68 aaPredicted RBP10.05□□□□□ -0.8
MSH5-202ENST00000375740 ANK3Q12955 4377 aaKnown RBP10.05□□□□□ -0.8
MSH5-202ENST00000375740 NPC2P61916 151 aa10.05□□□□□ -0.8
MSH5-202ENST00000375740 WFDC10AQ9H1F0 79 aa10.05□□□□□ -0.8
MSH5-202ENST00000375740 LY6G6DO95868 133 aa10.04□□□□□ -0.8
MSH5-202ENST00000375740 CEMP1Q6PRD7 247 aaPredicted RBP10.04□□□□□ -0.8
MSH5-202ENST00000375740 IL17DQ8TAD2 202 aa10.04□□□□□ -0.8
MSH5-202ENST00000375740 FAM104AQ969W3 186 aa10.04□□□□□ -0.8
MSH5-202ENST00000375740 PYGO1Q9Y3Y4 419 aa10.04□□□□□ -0.8
MSH5-202ENST00000375740 TRGV1A0A0A0MS02 117 aa10.03□□□□□ -0.8
MSH5-202ENST00000375740 IGHV3-38A0A0C4DH36 116 aa10.03□□□□□ -0.8
MSH5-202ENST00000375740 A0A0J9YXV3 536 aa10.03□□□□□ -0.8
MSH5-202ENST00000375740 TRBV30A0A0K0K1B3 111 aa10.03□□□□□ -0.8
MSH5-202ENST00000375740 LEPROTO15243 131 aa10.03□□□□□ -0.8
MSH5-202ENST00000375740 PRSS2P07478 247 aa10.03□□□□□ -0.8
MSH5-202ENST00000375740 DNAJC30Q96LL9 226 aa10.03□□□□□ -0.8
MSH5-202ENST00000375740 A0A0J9YXY3 114 aa10.03□□□□□ -0.8
MSH5-202ENST00000375740 GIG44P09565 113 aaPredicted RBP10.03□□□□□ -0.8
MSH5-202ENST00000375740 ADAMTSL4-AS1Q5T5F5 129 aa10.03□□□□□ -0.8
MSH5-202ENST00000375740 CHCHD7Q9BUK0 85 aa10.03□□□□□ -0.8
MSH5-202ENST00000375740 C19orf73Q9NVV2 129 aa10.03□□□□□ -0.8
MSH5-202ENST00000375740 FASNP49327 2511 aaKnown RBP10.02□□□□□ -0.8
MSH5-202ENST00000375740 KRTAP10-3P60369 221 aa10.02□□□□□ -0.8
MSH5-202ENST00000375740 RPL35AP18077 110 aaKnown RBP10.02□□□□□ -0.81
MSH5-202ENST00000375740 LINC01600Q96MT4 127 aa10.02□□□□□ -0.81
MSH5-202ENST00000375740 Q6ZTI0 123 aa10.01□□□□□ -0.81
MSH5-202ENST00000375740 LITAFQ99732 161 aa10.01□□□□□ -0.81
MSH5-202ENST00000375740 ICOSQ9Y6W8 199 aa10.01□□□□□ -0.81
MSH5-202ENST00000375740 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10□□□□□ -0.81
MSH5-202ENST00000375740 TRAV8-3A0A0A6YYJ7 113 aa10□□□□□ -0.81
MSH5-202ENST00000375740 TRAV16A0A0A6YYK6 109 aaPredicted RBP10□□□□□ -0.81
MSH5-202ENST00000375740 IGKV2-29A2NJV5 120 aaPredicted RBP10□□□□□ -0.81
MSH5-202ENST00000375740 A8MZ25 164 aa10□□□□□ -0.81
MSH5-202ENST00000375740 RNASE13Q5GAN3 156 aaKnown RBP10□□□□□ -0.81
MSH5-202ENST00000375740 NIPBLQ6KC79 2804 aaeCLIP10□□□□□ -0.81
MSH5-202ENST00000375740 UBE2D4Q9Y2X8 147 aa10□□□□□ -0.81
MSH5-202ENST00000375740 FAM236AA0A1B0GUQ0 79 aa9.99□□□□□ -0.81
MSH5-202ENST00000375740 FAM236BA0A1B0GV22 79 aa9.99□□□□□ -0.81
MSH5-202ENST00000375740 LINC00694P0DN24 101 aa9.99□□□□□ -0.81
MSH5-202ENST00000375740 NOP10Q9NPE3 64 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 666.9 ms