RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 FSHBP01225 129 aa11.84□□□□□ -0.51
IFT140-201ENST00000361339 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.83□□□□□ -0.52
IFT140-201ENST00000361339 M0R2P5 195 aa11.83□□□□□ -0.52
IFT140-201ENST00000361339 IGHV3-30-3P0DP02 117 aa11.83□□□□□ -0.52
IFT140-201ENST00000361339 DEFB131AP59861 70 aa11.83□□□□□ -0.52
IFT140-201ENST00000361339 MRPL23Q16540 153 aaKnown RBP11.83□□□□□ -0.52
IFT140-201ENST00000361339 C9orf85Q96MD7 179 aa11.83□□□□□ -0.52
IFT140-201ENST00000361339 TIMM17AQ99595 171 aa11.83□□□□□ -0.52
IFT140-201ENST00000361339 C2CD3Q4AC94 2353 aa11.83□□□□□ -0.52
IFT140-201ENST00000361339 RBMY1BA6NDE4 496 aaKnown RBP11.82□□□□□ -0.52
IFT140-201ENST00000361339 RBMY1EA6NEQ0 496 aaKnown RBP11.82□□□□□ -0.52
IFT140-201ENST00000361339 RBMY1DP0C7P1 496 aaKnown RBP11.82□□□□□ -0.52
IFT140-201ENST00000361339 POM121L12Q8N7R1 296 aa11.82□□□□□ -0.52
IFT140-201ENST00000361339 ZNF625Q96I27 306 aaPredicted RBP11.82□□□□□ -0.52
IFT140-201ENST00000361339 KLK5Q9Y337 293 aaPredicted RBP11.82□□□□□ -0.52
IFT140-201ENST00000361339 IGHV1OR15-1A0A075B7D0 117 aa11.82□□□□□ -0.52
IFT140-201ENST00000361339 LOC107984640A0A0U1RRK4 108 aa11.82□□□□□ -0.52
IFT140-201ENST00000361339 RS1O15537 224 aa11.82□□□□□ -0.52
IFT140-201ENST00000361339 COX6CP09669 75 aa11.81□□□□□ -0.52
IFT140-201ENST00000361339 TIMM21Q9BVV7 248 aa11.81□□□□□ -0.52
IFT140-201ENST00000361339 J3QLI3 93 aa11.8□□□□□ -0.52
IFT140-201ENST00000361339 UBE2E2Q96LR5 201 aa11.8□□□□□ -0.52
IFT140-201ENST00000361339 M0QY20 66 aa11.8□□□□□ -0.52
IFT140-201ENST00000361339 TMEM61Q8N0U2 210 aa11.8□□□□□ -0.52
IFT140-201ENST00000361339 ITPR2Q14571 2701 aa11.79□□□□□ -0.52
IFT140-201ENST00000361339 RPL13AP40429 203 aaKnown RBP11.79□□□□□ -0.52
IFT140-201ENST00000361339 TRBV30A0A0K0K1B3 111 aa11.79□□□□□ -0.52
IFT140-201ENST00000361339 I3L3M4 83 aa11.79□□□□□ -0.52
IFT140-201ENST00000361339 LINC00694P0DN24 101 aa11.79□□□□□ -0.52
IFT140-201ENST00000361339 CD28P10747 220 aa11.79□□□□□ -0.52
IFT140-201ENST00000361339 DEFB113Q30KQ7 82 aa11.79□□□□□ -0.52
IFT140-201ENST00000361339 Q6Q795 121 aa11.79□□□□□ -0.52
IFT140-201ENST00000361339 NDUFA12Q9UI09 145 aa11.79□□□□□ -0.52
IFT140-201ENST00000361339 M0QXV9 152 aa11.79□□□□□ -0.52
IFT140-201ENST00000361339 KRTAP1-3Q8IUG1 177 aa11.79□□□□□ -0.52
IFT140-201ENST00000361339 A0A1W2PRX2 142 aa11.77□□□□□ -0.52
IFT140-201ENST00000361339 IGLV4-3A0A075B6K6 122 aa11.77□□□□□ -0.53
IFT140-201ENST00000361339 C9orf153Q5TBE3 101 aa11.77□□□□□ -0.53
IFT140-201ENST00000361339 WFDC11Q8NEX6 87 aa11.77□□□□□ -0.53
IFT140-201ENST00000361339 SETXQ7Z333 2677 aaKnown RBP11.77□□□□□ -0.53
IFT140-201ENST00000361339 TRBV27A0A0K0K1C4 114 aa11.76□□□□□ -0.53
IFT140-201ENST00000361339 LINC01587Q99440 93 aa11.76□□□□□ -0.53
IFT140-201ENST00000361339 TNFRSF18Q9Y5U5 241 aa11.76□□□□□ -0.53
IFT140-201ENST00000361339 Q6ZSN1 163 aa11.76□□□□□ -0.53
IFT140-201ENST00000361339 TMEM89A2RUT3 159 aa11.75□□□□□ -0.53
IFT140-201ENST00000361339 C20orf203Q8NBC4 194 aa11.75□□□□□ -0.53
IFT140-201ENST00000361339 YAE1D1Q9NRH1 226 aa11.75□□□□□ -0.53
IFT140-201ENST00000361339 TMEM101Q96IK0 257 aa11.74□□□□□ -0.53
IFT140-201ENST00000361339 LITAFQ99732 161 aa11.74□□□□□ -0.53
IFT140-201ENST00000361339 IGHV3-38A0A0C4DH36 116 aa11.72□□□□□ -0.53
IFT140-201ENST00000361339 RNF152Q8N8N0 203 aa11.72□□□□□ -0.53
IFT140-201ENST00000361339 SMCR5Q8TEV8 140 aa11.72□□□□□ -0.53
IFT140-201ENST00000361339 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.71□□□□□ -0.53
IFT140-201ENST00000361339 IGKV2-29A2NJV5 120 aaPredicted RBP11.71□□□□□ -0.53
IFT140-201ENST00000361339 H3BT86 120 aa11.71□□□□□ -0.53
IFT140-201ENST00000361339 LST1O00453 97 aa11.71□□□□□ -0.53
IFT140-201ENST00000361339 PDZD2O15018 2839 aa11.71□□□□□ -0.53
IFT140-201ENST00000361339 ANK3Q12955 4377 aaKnown RBP11.71□□□□□ -0.53
IFT140-201ENST00000361339 TRBV6-5A0A0K0K1A5 114 aa11.7□□□□□ -0.54
IFT140-201ENST00000361339 MAP6D1Q9H9H5 199 aa11.7□□□□□ -0.54
IFT140-201ENST00000361339 ESM1Q9NQ30 184 aa11.7□□□□□ -0.54
IFT140-201ENST00000361339 IGHV3OR16-12A0A075B7B8 117 aa11.7□□□□□ -0.54
IFT140-201ENST00000361339 EDA2RQ9HAV5 297 aa11.7□□□□□ -0.54
IFT140-201ENST00000361339 HELZ2Q9BYK8 2649 aaKnown RBP11.69□□□□□ -0.54
IFT140-201ENST00000361339 MIAQ16674 131 aa11.69□□□□□ -0.54
IFT140-201ENST00000361339 DYNLRB2Q8TF09 96 aa11.69□□□□□ -0.54
IFT140-201ENST00000361339 XCL2Q9UBD3 114 aa11.69□□□□□ -0.54
IFT140-201ENST00000361339 HERVK_113P63121 156 aa11.68□□□□□ -0.54
IFT140-201ENST00000361339 RHOHQ15669 191 aa11.68□□□□□ -0.54
IFT140-201ENST00000361339 FAM104AQ969W3 186 aa11.68□□□□□ -0.54
IFT140-201ENST00000361339 IGHV1-58A0A0C4DH39 117 aa11.68□□□□□ -0.54
IFT140-201ENST00000361339 NSUN5P1Q3KNT7 163 aa11.67□□□□□ -0.54
IFT140-201ENST00000361339 Q8N2B8 174 aa11.67□□□□□ -0.54
IFT140-201ENST00000361339 DEFB114Q30KQ6 69 aa11.67□□□□□ -0.54
IFT140-201ENST00000361339 DNAJC9-AS1A6NH13 148 aa11.67□□□□□ -0.54
IFT140-201ENST00000361339 GAGE2AQ6NT46 116 aa11.67□□□□□ -0.54
IFT140-201ENST00000361339 C4orf3Q8WVX3 66 aa11.67□□□□□ -0.54
IFT140-201ENST00000361339 TMEM126AQ9H061 195 aa11.67□□□□□ -0.54
IFT140-201ENST00000361339 DAZ2Q13117 558 aaKnown RBP11.66□□□□□ -0.54
IFT140-201ENST00000361339 DAZ4Q86SG3 579 aaKnown RBP11.66□□□□□ -0.54
IFT140-201ENST00000361339 Q9HAA7 133 aa11.66□□□□□ -0.54
IFT140-201ENST00000361339 DAZ3Q9NR90 486 aaKnown RBP11.66□□□□□ -0.54
IFT140-201ENST00000361339 ODF3L2Q3SX64 289 aa11.65□□□□□ -0.54
IFT140-201ENST00000361339 VSIG2Q96IQ7 327 aa11.65□□□□□ -0.54
IFT140-201ENST00000361339 CITED2Q99967 270 aaPredicted RBP11.65□□□□□ -0.54
IFT140-201ENST00000361339 CDKN2A-AS1Q9UH64 79 aa11.65□□□□□ -0.54
IFT140-201ENST00000361339 TRAV13-1A0A0B4J241 112 aa11.64□□□□□ -0.55
IFT140-201ENST00000361339 TRBV7-7A0A0K0K1E9 115 aa11.64□□□□□ -0.55
IFT140-201ENST00000361339 NDUFA7O95182 113 aa11.64□□□□□ -0.55
IFT140-201ENST00000361339 C3orf22Q8N5N4 141 aa11.64□□□□□ -0.55
IFT140-201ENST00000361339 WFDC10AQ9H1F0 79 aa11.64□□□□□ -0.55
IFT140-201ENST00000361339 NOTCH2Q04721 2471 aa11.63□□□□□ -0.55
IFT140-201ENST00000361339 FASNP49327 2511 aaKnown RBP11.63□□□□□ -0.55
IFT140-201ENST00000361339 C11orf72Q8NBR9 251 aa11.63□□□□□ -0.55
IFT140-201ENST00000361339 PEMTQ9UBM1 199 aa11.63□□□□□ -0.55
IFT140-201ENST00000361339 BAALC-AS2P0C853 105 aa11.63□□□□□ -0.55
IFT140-201ENST00000361339 Q9H8V8 135 aa11.62□□□□□ -0.55
IFT140-201ENST00000361339 CSDC2Q9Y534 153 aaKnown RBP11.62□□□□□ -0.55
IFT140-201ENST00000361339 hADV29S1A0JD25 119 aa11.62□□□□□ -0.55
IFT140-201ENST00000361339 MRPS36P82909 103 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms