RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 DEFB4AO15263 64 aa7.01□□□□□ -1.29
VPS13A-203ENST00000360280 PRR4Q16378 134 aa7.01□□□□□ -1.29
VPS13A-203ENST00000360280 TRBV7-6A0A0J9YX20 115 aa7.01□□□□□ -1.29
VPS13A-203ENST00000360280 WFDC13Q8IUB5 93 aa7.01□□□□□ -1.29
VPS13A-203ENST00000360280 M0QXV9 152 aa7.01□□□□□ -1.29
VPS13A-203ENST00000360280 MYCNOSP40205 109 aa7.01□□□□□ -1.29
VPS13A-203ENST00000360280 C6orf99Q4VX62 202 aa7.01□□□□□ -1.29
VPS13A-203ENST00000360280 CFAP126Q5VTH2 177 aa7.01□□□□□ -1.29
VPS13A-203ENST00000360280 EBI3Q14213 229 aa7.01□□□□□ -1.29
VPS13A-203ENST00000360280 HILS1P60008 231 aa7.01□□□□□ -1.29
VPS13A-203ENST00000360280 C10orf25Q5T742 122 aa7.01□□□□□ -1.29
VPS13A-203ENST00000360280 HIVEP2P31629 2446 aa7.01□□□□□ -1.29
VPS13A-203ENST00000360280 RBX1P62877 108 aa7.01□□□□□ -1.29
VPS13A-203ENST00000360280 SPINK6Q6UWN8 80 aa7□□□□□ -1.29
VPS13A-203ENST00000360280 LINC00474Q9P2X8 69 aa7□□□□□ -1.29
VPS13A-203ENST00000360280 FAM30AQ9NZY2 134 aa7□□□□□ -1.29
VPS13A-203ENST00000360280 KRTAP27-1Q3LI81 207 aa7□□□□□ -1.29
VPS13A-203ENST00000360280 TRBV6-8A0A0A6YYG3 113 aa7□□□□□ -1.29
VPS13A-203ENST00000360280 HRCT1Q6UXD1 115 aa7□□□□□ -1.29
VPS13A-203ENST00000360280 DCANP1Q8TF63 244 aa7□□□□□ -1.29
VPS13A-203ENST00000360280 IGHV4-61A0A0C4DH41 118 aa6.99□□□□□ -1.29
VPS13A-203ENST00000360280 IGHV4-30-4P0DP06 118 aa6.99□□□□□ -1.29
VPS13A-203ENST00000360280 IGHV4-31P0DP07 118 aa6.99□□□□□ -1.29
VPS13A-203ENST00000360280 M0R378 163 aa6.99□□□□□ -1.29
VPS13A-203ENST00000360280 ODF3L1Q8IXM7 274 aa6.99□□□□□ -1.29
VPS13A-203ENST00000360280 Q6ZQY7 126 aa6.99□□□□□ -1.29
VPS13A-203ENST00000360280 C22orf34Q6ZV56 151 aa6.99□□□□□ -1.29
VPS13A-203ENST00000360280 PYGO1Q9Y3Y4 419 aa6.99□□□□□ -1.29
VPS13A-203ENST00000360280 ZNF22P17026 224 aaPredicted RBP6.99□□□□□ -1.29
VPS13A-203ENST00000360280 COL4A4P53420 1690 aaPredicted RBP6.99□□□□□ -1.29
VPS13A-203ENST00000360280 U3KQK5 164 aa6.99□□□□□ -1.29
VPS13A-203ENST00000360280 IGLV2-14P01704 120 aa6.98□□□□□ -1.29
VPS13A-203ENST00000360280 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.98□□□□□ -1.29
VPS13A-203ENST00000360280 LY6LH3BQJ8 138 aa6.98□□□□□ -1.29
VPS13A-203ENST00000360280 CSDC2Q9Y534 153 aaKnown RBP6.98□□□□□ -1.29
VPS13A-203ENST00000360280 UNQ9165/PRO28630Q6UXU0 137 aa6.98□□□□□ -1.29
VPS13A-203ENST00000360280 SONP18583 2426 aaKnown RBP6.98□□□□□ -1.29
VPS13A-203ENST00000360280 Q6ZTI0 123 aa6.98□□□□□ -1.29
VPS13A-203ENST00000360280 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.98□□□□□ -1.29
VPS13A-203ENST00000360280 RNF185Q96GF1 192 aa6.98□□□□□ -1.29
VPS13A-203ENST00000360280 ESRGQ1W209 222 aa6.97□□□□□ -1.29
VPS13A-203ENST00000360280 Q8N976 141 aa6.97□□□□□ -1.29
VPS13A-203ENST00000360280 LINC00322Q6ZN03 302 aaPredicted RBP6.97□□□□□ -1.29
VPS13A-203ENST00000360280 XAGE1AQ9HD64 81 aa6.97□□□□□ -1.29
VPS13A-203ENST00000360280 CUL9Q8IWT3 2517 aa6.97□□□□□ -1.29
VPS13A-203ENST00000360280 TRBV6-4A0A1B0GX49 114 aa6.97□□□□□ -1.29
VPS13A-203ENST00000360280 SPRNQ5BIV9 151 aa6.97□□□□□ -1.29
VPS13A-203ENST00000360280 IGLV1-47P01700 117 aa6.97□□□□□ -1.29
VPS13A-203ENST00000360280 XGP55808 180 aa6.97□□□□□ -1.29
VPS13A-203ENST00000360280 LINC01548A6NM66 108 aa6.97□□□□□ -1.29
VPS13A-203ENST00000360280 LINC00526Q96FQ7 95 aa6.97□□□□□ -1.29
VPS13A-203ENST00000360280 SMIM11BQ8TCY0 68 aa6.96□□□□□ -1.29
VPS13A-203ENST00000360280 Q6ZSR3 168 aa6.96□□□□□ -1.29
VPS13A-203ENST00000360280 TP53TG3Q9ULZ0 132 aa6.96□□□□□ -1.3
VPS13A-203ENST00000360280 SYCNQ0VAF6 134 aa6.96□□□□□ -1.3
VPS13A-203ENST00000360280 ZNF524Q96C55 264 aa6.96□□□□□ -1.3
VPS13A-203ENST00000360280 ZNF73O43830 326 aaPredicted RBP6.96□□□□□ -1.3
VPS13A-203ENST00000360280 DEFB131BA0A096LNP1 70 aa6.96□□□□□ -1.3
VPS13A-203ENST00000360280 SERTAD4-AS1Q5TG53 156 aa6.96□□□□□ -1.3
VPS13A-203ENST00000360280 M0QY20 66 aa6.95□□□□□ -1.3
VPS13A-203ENST00000360280 CD164L2Q6UWJ8 174 aa6.95□□□□□ -1.3
VPS13A-203ENST00000360280 FRMD6-AS1P0C7T7 363 aa6.95□□□□□ -1.3
VPS13A-203ENST00000360280 ZNF80P51504 273 aaPredicted RBP6.95□□□□□ -1.3
VPS13A-203ENST00000360280 PSPHP1O15172 72 aa6.95□□□□□ -1.3
VPS13A-203ENST00000360280 E7EUB6 86 aa6.95□□□□□ -1.3
VPS13A-203ENST00000360280 PLA2G2EQ9NZK7 142 aa6.95□□□□□ -1.3
VPS13A-203ENST00000360280 CLUHP3Q96NS8 147 aa6.94□□□□□ -1.3
VPS13A-203ENST00000360280 LY6G6EA0A0G2JKS1 128 aa6.94□□□□□ -1.3
VPS13A-203ENST00000360280 LOC107984640A0A0U1RRK4 108 aa6.94□□□□□ -1.3
VPS13A-203ENST00000360280 IGLV4-69A0A075B6H9 119 aa6.94□□□□□ -1.3
VPS13A-203ENST00000360280 C2orf91Q6ZV80 131 aa6.94□□□□□ -1.3
VPS13A-203ENST00000360280 LINC00208Q96KT6 92 aa6.94□□□□□ -1.3
VPS13A-203ENST00000360280 CCDC140Q96MF4 163 aa6.94□□□□□ -1.3
VPS13A-203ENST00000360280 U3KQA8 63 aa6.94□□□□□ -1.3
VPS13A-203ENST00000360280 A8MZ25 164 aa6.93□□□□□ -1.3
VPS13A-203ENST00000360280 MAPKAPK5-AS1Q8N8E1 139 aa6.93□□□□□ -1.3
VPS13A-203ENST00000360280 LTBP2Q14767 1821 aa6.93□□□□□ -1.3
VPS13A-203ENST00000360280 IGLV9-49A0A0B4J1Y8 123 aa6.93□□□□□ -1.3
VPS13A-203ENST00000360280 NTM-AS1Q6ZSK4 140 aa6.93□□□□□ -1.3
VPS13A-203ENST00000360280 GDF5OSQ5U4N7 250 aa6.93□□□□□ -1.3
VPS13A-203ENST00000360280 DNAJC9-AS1A6NH13 148 aa6.92□□□□□ -1.3
VPS13A-203ENST00000360280 GRNP28799 593 aaKnown RBP6.92□□□□□ -1.3
VPS13A-203ENST00000360280 C11orf1Q9H5F2 150 aa6.92□□□□□ -1.3
VPS13A-203ENST00000360280 YPEL4Q96NS1 127 aa6.92□□□□□ -1.3
VPS13A-203ENST00000360280 DEFB1P60022 68 aa6.92□□□□□ -1.3
VPS13A-203ENST00000360280 K7EQG2 157 aa6.91□□□□□ -1.3
VPS13A-203ENST00000360280 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.91□□□□□ -1.3
VPS13A-203ENST00000360280 SOSTDC1Q6X4U4 206 aa6.91□□□□□ -1.3
VPS13A-203ENST00000360280 PRO0628Q9UI54 55 aa6.91□□□□□ -1.3
VPS13A-203ENST00000360280 PLA2G2CQ5R387 149 aa6.91□□□□□ -1.3
VPS13A-203ENST00000360280 PPDPFQ9H3Y8 114 aa6.91□□□□□ -1.3
VPS13A-203ENST00000360280 CELA1Q9UNI1 258 aa6.91□□□□□ -1.3
VPS13A-203ENST00000360280 IGLV2-8P01709 118 aa6.91□□□□□ -1.3
VPS13A-203ENST00000360280 COL27A1Q8IZC6 1860 aaPredicted RBP6.91□□□□□ -1.3
VPS13A-203ENST00000360280 LIMD2Q9BT23 127 aa6.91□□□□□ -1.3
VPS13A-203ENST00000360280 IGF1P05019 195 aa6.9□□□□□ -1.3
VPS13A-203ENST00000360280 Q8N7P7 452 aa6.9□□□□□ -1.3
VPS13A-203ENST00000360280 POM121L12Q8N7R1 296 aa6.9□□□□□ -1.3
VPS13A-203ENST00000360280 RPL28P46779 137 aaKnown RBP6.9□□□□□ -1.31
VPS13A-203ENST00000360280 Q8IZM0 81 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms