RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 TOMM7Q9P0U1 55 aa9.76□□□□□ -0.85
NCDN-201ENST00000356090 MIAQ16674 131 aa9.75□□□□□ -0.85
NCDN-201ENST00000356090 SBSPONQ8IVN8 264 aa9.75□□□□□ -0.85
NCDN-201ENST00000356090 H7C423 109 aa9.75□□□□□ -0.85
NCDN-201ENST00000356090 NDUFV3P56181 108 aaKnown RBP9.75□□□□□ -0.85
NCDN-201ENST00000356090 PRIMA1Q86XR5 153 aa9.75□□□□□ -0.85
NCDN-201ENST00000356090 TRBV30A0A0K0K1B3 111 aa9.74□□□□□ -0.85
NCDN-201ENST00000356090 MRPS36P82909 103 aaKnown RBP9.74□□□□□ -0.85
NCDN-201ENST00000356090 CCDC179H3BU77 68 aa9.73□□□□□ -0.85
NCDN-201ENST00000356090 ODF3Q96PU9 254 aa9.73□□□□□ -0.85
NCDN-201ENST00000356090 CFAP46Q8IYW2 2715 aa9.73□□□□□ -0.85
NCDN-201ENST00000356090 CHD6Q8TD26 2715 aa9.73□□□□□ -0.85
NCDN-201ENST00000356090 UBE2D4Q9Y2X8 147 aa9.73□□□□□ -0.85
NCDN-201ENST00000356090 ZNF462Q96JM2 2506 aa9.72□□□□□ -0.85
NCDN-201ENST00000356090 GAGE12JA6NER3 117 aa9.72□□□□□ -0.85
NCDN-201ENST00000356090 GAGE7O76087 117 aa9.72□□□□□ -0.85
NCDN-201ENST00000356090 GAGE12FP0CL80 117 aa9.72□□□□□ -0.85
NCDN-201ENST00000356090 GAGE12GP0CL81 117 aa9.72□□□□□ -0.85
NCDN-201ENST00000356090 GAGE12IP0CL82 117 aa9.72□□□□□ -0.85
NCDN-201ENST00000356090 GAGE4Q13068 117 aa9.72□□□□□ -0.85
NCDN-201ENST00000356090 SPANXA1Q9NS26 97 aa9.72□□□□□ -0.85
NCDN-201ENST00000356090 LITAFQ99732 161 aa9.71□□□□□ -0.85
NCDN-201ENST00000356090 CHCHD7Q9BUK0 85 aa9.71□□□□□ -0.85
NCDN-201ENST00000356090 TINCRA0A1B0GVN0 87 aa9.71□□□□□ -0.86
NCDN-201ENST00000356090 TMEM101Q96IK0 257 aa9.71□□□□□ -0.86
NCDN-201ENST00000356090 PYGO1Q9Y3Y4 419 aa9.71□□□□□ -0.86
NCDN-201ENST00000356090 RBMY1BA6NDE4 496 aaKnown RBP9.7□□□□□ -0.86
NCDN-201ENST00000356090 RBMY1EA6NEQ0 496 aaKnown RBP9.7□□□□□ -0.86
NCDN-201ENST00000356090 RBMY1DP0C7P1 496 aaKnown RBP9.7□□□□□ -0.86
NCDN-201ENST00000356090 COX6A2Q02221 97 aa9.7□□□□□ -0.86
NCDN-201ENST00000356090 CSMD2Q7Z408 3487 aa9.7□□□□□ -0.86
NCDN-201ENST00000356090 ACANP16112 2415 aa9.7□□□□□ -0.86
NCDN-201ENST00000356090 LINC01356Q8N9X3 169 aa9.7□□□□□ -0.86
NCDN-201ENST00000356090 VPREB3Q9UKI3 123 aa9.7□□□□□ -0.86
NCDN-201ENST00000356090 INSP01308 110 aa9.69□□□□□ -0.86
NCDN-201ENST00000356090 UBE2L6O14933 153 aa9.69□□□□□ -0.86
NCDN-201ENST00000356090 STHQ8IWL8 128 aa9.69□□□□□ -0.86
NCDN-201ENST00000356090 TEX15Q9BXT5 2789 aa9.68□□□□□ -0.86
NCDN-201ENST00000356090 CHCHD5Q9BSY4 110 aa9.68□□□□□ -0.86
NCDN-201ENST00000356090 PPDPFQ9H3Y8 114 aa9.68□□□□□ -0.86
NCDN-201ENST00000356090 RS1O15537 224 aa9.68□□□□□ -0.86
NCDN-201ENST00000356090 PIK3CD-AS1Q5SR53 167 aa9.68□□□□□ -0.86
NCDN-201ENST00000356090 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.68□□□□□ -0.86
NCDN-201ENST00000356090 FBN2P35556 2912 aa9.68□□□□□ -0.86
NCDN-201ENST00000356090 LINC00694P0DN24 101 aa9.68□□□□□ -0.86
NCDN-201ENST00000356090 SPANXDQ9BXN6 97 aa9.68□□□□□ -0.86
NCDN-201ENST00000356090 C11orf68Q9H3H3 251 aaKnown RBP9.68□□□□□ -0.86
NCDN-201ENST00000356090 SPANXCQ9NY87 97 aa9.68□□□□□ -0.86
NCDN-201ENST00000356090 H3BT86 120 aa9.67□□□□□ -0.86
NCDN-201ENST00000356090 LST1O00453 97 aa9.67□□□□□ -0.86
NCDN-201ENST00000356090 LINC00308Q8TCZ7 52 aa9.67□□□□□ -0.86
NCDN-201ENST00000356090 FAM104AQ969W3 186 aa9.67□□□□□ -0.86
NCDN-201ENST00000356090 MAP6D1Q9H9H5 199 aa9.67□□□□□ -0.86
NCDN-201ENST00000356090 PEMTQ9UBM1 199 aa9.67□□□□□ -0.86
NCDN-201ENST00000356090 RPL36AP83881 106 aaKnown RBP9.67□□□□□ -0.86
NCDN-201ENST00000356090 RPL36ALQ969Q0 106 aaKnown RBP9.67□□□□□ -0.86
NCDN-201ENST00000356090 NHLRC4P0CG21 123 aaPredicted RBP9.66□□□□□ -0.86
NCDN-201ENST00000356090 MXRA5Q9NR99 2828 aa9.66□□□□□ -0.86
NCDN-201ENST00000356090 Q9HAA7 133 aa9.66□□□□□ -0.86
NCDN-201ENST00000356090 TRGV2A0A075B6R0 118 aa9.66□□□□□ -0.86
NCDN-201ENST00000356090 HERVK_113P63121 156 aa9.65□□□□□ -0.86
NCDN-201ENST00000356090 Q6ZTI0 123 aa9.65□□□□□ -0.86
NCDN-201ENST00000356090 Q8N2B8 174 aa9.65□□□□□ -0.87
NCDN-201ENST00000356090 ZNF702PQ9H963 129 aa9.65□□□□□ -0.87
NCDN-201ENST00000356090 GAGE2AQ6NT46 116 aa9.64□□□□□ -0.87
NCDN-201ENST00000356090 OR13C6PQ8NH95 151 aa9.64□□□□□ -0.87
NCDN-201ENST00000356090 FAM236AA0A1B0GUQ0 79 aa9.64□□□□□ -0.87
NCDN-201ENST00000356090 FAM236BA0A1B0GV22 79 aa9.64□□□□□ -0.87
NCDN-201ENST00000356090 TMEM89A2RUT3 159 aa9.64□□□□□ -0.87
NCDN-201ENST00000356090 LINC00242Q5T6M2 205 aa9.64□□□□□ -0.87
NCDN-201ENST00000356090 NOP10Q9NPE3 64 aaKnown RBP9.64□□□□□ -0.87
NCDN-201ENST00000356090 HIVEP2P31629 2446 aa9.64□□□□□ -0.87
NCDN-201ENST00000356090 BAALC-AS2P0C853 105 aa9.63□□□□□ -0.87
NCDN-201ENST00000356090 LINC00158P58513 81 aa9.63□□□□□ -0.87
NCDN-201ENST00000356090 C5orf47Q569G3 176 aa9.63□□□□□ -0.87
NCDN-201ENST00000356090 NOTCH2Q04721 2471 aa9.63□□□□□ -0.87
NCDN-201ENST00000356090 NF1P21359 2839 aa9.63□□□□□ -0.87
NCDN-201ENST00000356090 NDUFA1O15239 70 aa9.63□□□□□ -0.87
NCDN-201ENST00000356090 RPL35AP18077 110 aaKnown RBP9.63□□□□□ -0.87
NCDN-201ENST00000356090 PFN2P35080 140 aa9.63□□□□□ -0.87
NCDN-201ENST00000356090 CITED2Q99967 270 aaPredicted RBP9.63□□□□□ -0.87
NCDN-201ENST00000356090 DAZ2Q13117 558 aaKnown RBP9.62□□□□□ -0.87
NCDN-201ENST00000356090 DAZ4Q86SG3 579 aaKnown RBP9.62□□□□□ -0.87
NCDN-201ENST00000356090 DAZ3Q9NR90 486 aaKnown RBP9.62□□□□□ -0.87
NCDN-201ENST00000356090 DNAL4O96015 105 aa9.62□□□□□ -0.87
NCDN-201ENST00000356090 IGSF10Q6WRI0 2623 aa9.61□□□□□ -0.87
NCDN-201ENST00000356090 CRPP02741 224 aa9.61□□□□□ -0.87
NCDN-201ENST00000356090 SOSTDC1Q6X4U4 206 aa9.6□□□□□ -0.87
NCDN-201ENST00000356090 MRPL23Q16540 153 aaKnown RBP9.6□□□□□ -0.87
NCDN-201ENST00000356090 LOC100131303A0A0U1RQF7 123 aa9.6□□□□□ -0.87
NCDN-201ENST00000356090 COX7A2LO14548 114 aa9.6□□□□□ -0.87
NCDN-201ENST00000356090 PRB1P04280 392 aa9.6□□□□□ -0.87
NCDN-201ENST00000356090 DNAJC30Q96LL9 226 aa9.6□□□□□ -0.87
NCDN-201ENST00000356090 SMIM1B2RUZ4 78 aa9.59□□□□□ -0.87
NCDN-201ENST00000356090 C11orf72Q8NBR9 251 aa9.59□□□□□ -0.87
NCDN-201ENST00000356090 TRGV4A0A0C4DH28 118 aa9.59□□□□□ -0.87
NCDN-201ENST00000356090 TIRAPP58753 221 aa9.59□□□□□ -0.87
NCDN-201ENST00000356090 DEFB114Q30KQ6 69 aa9.59□□□□□ -0.87
NCDN-201ENST00000356090 MIR7-3HGQ8N6C7 128 aa9.59□□□□□ -0.87
NCDN-201ENST00000356090 PRORYQ9H606 182 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms