RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 MAP1LC3AQ9H492 121 aa12.03□□□□□ -0.48
PDLIM7-202ENST00000355841 IGLV4-60A0A075B6I1 120 aa12.03□□□□□ -0.48
PDLIM7-202ENST00000355841 K7EP13 123 aa12.03□□□□□ -0.48
PDLIM7-202ENST00000355841 NUPR1O60356 82 aa12.03□□□□□ -0.48
PDLIM7-202ENST00000355841 ANGP03950 147 aaKnown RBP12.03□□□□□ -0.48
PDLIM7-202ENST00000355841 LINC00310P59036 64 aa12.03□□□□□ -0.48
PDLIM7-202ENST00000355841 BAGE3Q86Y29 109 aa12.03□□□□□ -0.48
PDLIM7-202ENST00000355841 ALKBH7Q9BT30 221 aaPredicted RBP12.03□□□□□ -0.48
PDLIM7-202ENST00000355841 SERF1AO75920 110 aa12.02□□□□□ -0.49
PDLIM7-202ENST00000355841 MRPL52Q86TS9 123 aaKnown RBP12.02□□□□□ -0.49
PDLIM7-202ENST00000355841 CLPSL2Q6UWE3 100 aa12.01□□□□□ -0.49
PDLIM7-202ENST00000355841 PRSS47A8MTI9 375 aa12□□□□□ -0.49
PDLIM7-202ENST00000355841 FGF6P10767 208 aa12□□□□□ -0.49
PDLIM7-202ENST00000355841 IFI27P40305 119 aaPredicted RBP12□□□□□ -0.49
PDLIM7-202ENST00000355841 RNASEKQ6P5S7 137 aaKnown RBP12□□□□□ -0.49
PDLIM7-202ENST00000355841 TEX43Q6ZNM6 134 aa12□□□□□ -0.49
PDLIM7-202ENST00000355841 UBE2WQ96B02 151 aa12□□□□□ -0.49
PDLIM7-202ENST00000355841 AMMECR1LQ6DCA0 310 aa12□□□□□ -0.49
PDLIM7-202ENST00000355841 LINC00269Q8N2A0 174 aa12□□□□□ -0.49
PDLIM7-202ENST00000355841 C20orf203Q8NBC4 194 aa12□□□□□ -0.49
PDLIM7-202ENST00000355841 Q6ZRN7 208 aaPredicted RBP11.99□□□□□ -0.49
PDLIM7-202ENST00000355841 Q8N8P6 123 aa11.99□□□□□ -0.49
PDLIM7-202ENST00000355841 A0A1B0GUV1 79 aa11.98□□□□□ -0.49
PDLIM7-202ENST00000355841 RPL39P62891 51 aaKnown RBP11.98□□□□□ -0.49
PDLIM7-202ENST00000355841 ENHOQ6UWT2 76 aa11.98□□□□□ -0.49
PDLIM7-202ENST00000355841 LAGE3Q14657 143 aa11.97□□□□□ -0.49
PDLIM7-202ENST00000355841 FAT2Q9NYQ8 4349 aa11.97□□□□□ -0.49
PDLIM7-202ENST00000355841 H7C423 109 aa11.97□□□□□ -0.49
PDLIM7-202ENST00000355841 DNAH17Q9UFH2 4485 aa11.96□□□□□ -0.49
PDLIM7-202ENST00000355841 TRAV8-3A0A0A6YYJ7 113 aa11.96□□□□□ -0.5
PDLIM7-202ENST00000355841 TNP2Q05952 138 aa11.96□□□□□ -0.5
PDLIM7-202ENST00000355841 PRSS3P2Q8NHM4 247 aa11.96□□□□□ -0.5
PDLIM7-202ENST00000355841 NXT2Q9NPJ8 142 aaKnown RBP11.96□□□□□ -0.5
PDLIM7-202ENST00000355841 A0A1B0GV90 55 aa11.95□□□□□ -0.5
PDLIM7-202ENST00000355841 PRSS29PA6NIE9 313 aa11.95□□□□□ -0.5
PDLIM7-202ENST00000355841 CRPP02741 224 aa11.95□□□□□ -0.5
PDLIM7-202ENST00000355841 NFE4Q86UQ8 179 aa11.95□□□□□ -0.5
PDLIM7-202ENST00000355841 IGKV3OR2-268A0A0C4DH90 116 aa11.94□□□□□ -0.5
PDLIM7-202ENST00000355841 BTF3P20290 206 aaKnown RBP11.94□□□□□ -0.5
PDLIM7-202ENST00000355841 REG3AQ06141 175 aa11.94□□□□□ -0.5
PDLIM7-202ENST00000355841 PRR34Q9NV39 138 aa11.94□□□□□ -0.5
PDLIM7-202ENST00000355841 UBE2D4Q9Y2X8 147 aa11.94□□□□□ -0.5
PDLIM7-202ENST00000355841 IGKV2D-24A0A075B6R9 120 aa11.94□□□□□ -0.5
PDLIM7-202ENST00000355841 M0R143 59 aa11.94□□□□□ -0.5
PDLIM7-202ENST00000355841 OR5A1Q8NGJ0 315 aa11.94□□□□□ -0.5
PDLIM7-202ENST00000355841 TMEM101Q96IK0 257 aa11.94□□□□□ -0.5
PDLIM7-202ENST00000355841 RNASE13Q5GAN3 156 aaKnown RBP11.93□□□□□ -0.5
PDLIM7-202ENST00000355841 C18orf32Q8TCD1 76 aa11.93□□□□□ -0.5
PDLIM7-202ENST00000355841 VAMP8Q9BV40 100 aa11.93□□□□□ -0.5
PDLIM7-202ENST00000355841 IGLV10-54A0A075B6I4 117 aa11.92□□□□□ -0.5
PDLIM7-202ENST00000355841 PSCAO43653 123 aa11.92□□□□□ -0.5
PDLIM7-202ENST00000355841 ZNF25P17030 456 aaPredicted RBP11.92□□□□□ -0.5
PDLIM7-202ENST00000355841 DGAT2L7PQ6IED9 249 aa11.92□□□□□ -0.5
PDLIM7-202ENST00000355841 LINC00336Q6ZUF6 198 aa11.92□□□□□ -0.5
PDLIM7-202ENST00000355841 MIEN1Q9BRT3 115 aa11.92□□□□□ -0.5
PDLIM7-202ENST00000355841 OPRPNQ99935 248 aaPredicted RBP11.91□□□□□ -0.5
PDLIM7-202ENST00000355841 EREGO14944 169 aa11.91□□□□□ -0.5
PDLIM7-202ENST00000355841 ORMDL2Q53FV1 153 aa11.91□□□□□ -0.5
PDLIM7-202ENST00000355841 CDC42SE2Q9NRR3 84 aa11.91□□□□□ -0.5
PDLIM7-202ENST00000355841 MIAQ16674 131 aa11.9□□□□□ -0.5
PDLIM7-202ENST00000355841 C2orf66Q6UXQ4 117 aa11.9□□□□□ -0.5
PDLIM7-202ENST00000355841 Q6ZUT4 128 aa11.9□□□□□ -0.5
PDLIM7-202ENST00000355841 FA2HQ7L5A8 372 aa11.9□□□□□ -0.5
PDLIM7-202ENST00000355841 MAPKAPK5-AS1Q8N8E1 139 aa11.9□□□□□ -0.5
PDLIM7-202ENST00000355841 URB1-AS1Q96HZ7 61 aa11.9□□□□□ -0.5
PDLIM7-202ENST00000355841 C1orf43Q9BWL3 253 aa11.9□□□□□ -0.5
PDLIM7-202ENST00000355841 SNHG12Q9BXW3 62 aa11.9□□□□□ -0.5
PDLIM7-202ENST00000355841 FAM104AQ969W3 186 aa11.89□□□□□ -0.51
PDLIM7-202ENST00000355841 K7EMI3 77 aa11.88□□□□□ -0.51
PDLIM7-202ENST00000355841 KRTDAPP60985 99 aa11.88□□□□□ -0.51
PDLIM7-202ENST00000355841 RMI2Q96E14 147 aa11.88□□□□□ -0.51
PDLIM7-202ENST00000355841 TM2D2Q9BX73 214 aa11.88□□□□□ -0.51
PDLIM7-202ENST00000355841 TIMM21Q9BVV7 248 aa11.87□□□□□ -0.51
PDLIM7-202ENST00000355841 CYSLTR1Q9Y271 337 aa11.87□□□□□ -0.51
PDLIM7-202ENST00000355841 CSDC2Q9Y534 153 aaKnown RBP11.87□□□□□ -0.51
PDLIM7-202ENST00000355841 LINC01546A6NGU7 62 aa11.87□□□□□ -0.51
PDLIM7-202ENST00000355841 LECT2O14960 151 aa11.87□□□□□ -0.51
PDLIM7-202ENST00000355841 SPANXA1Q9NS26 97 aa11.87□□□□□ -0.51
PDLIM7-202ENST00000355841 EPPK1P58107 5090 aaKnown RBP11.87□□□□□ -0.51
PDLIM7-202ENST00000355841 LINC00614P0C842 121 aa11.86□□□□□ -0.51
PDLIM7-202ENST00000355841 SMAGPQ0VAQ4 97 aa11.86□□□□□ -0.51
PDLIM7-202ENST00000355841 WFDC2Q14508 124 aa11.86□□□□□ -0.51
PDLIM7-202ENST00000355841 BAALCQ8WXS3 180 aa11.86□□□□□ -0.51
PDLIM7-202ENST00000355841 PAM16Q9Y3D7 125 aa11.86□□□□□ -0.51
PDLIM7-202ENST00000355841 PKD1P98161 4303 aa11.86□□□□□ -0.51
PDLIM7-202ENST00000355841 HECTD4Q9Y4D8 3996 aa11.85□□□□□ -0.51
PDLIM7-202ENST00000355841 LRCOL1A6NCL2 159 aa11.85□□□□□ -0.51
PDLIM7-202ENST00000355841 HSBP1O75506 76 aa11.85□□□□□ -0.51
PDLIM7-202ENST00000355841 PMCHL1Q16048 86 aa11.85□□□□□ -0.51
PDLIM7-202ENST00000355841 KRTAP26-1Q6PEX3 210 aa11.85□□□□□ -0.51
PDLIM7-202ENST00000355841 AP5S1Q9NUS5 200 aa11.85□□□□□ -0.51
PDLIM7-202ENST00000355841 A0A087WTM6 91 aa11.84□□□□□ -0.51
PDLIM7-202ENST00000355841 LINC00959A0A1B0GUT2 108 aa11.84□□□□□ -0.51
PDLIM7-202ENST00000355841 A0A1B0GVY2 172 aa11.84□□□□□ -0.51
PDLIM7-202ENST00000355841 C3orf79P0CE67 100 aa11.84□□□□□ -0.51
PDLIM7-202ENST00000355841 COX11Q9Y6N1 276 aa11.84□□□□□ -0.51
PDLIM7-202ENST00000355841 DNAH11Q96DT5 4516 aa11.84□□□□□ -0.51
PDLIM7-202ENST00000355841 TRAV13-1A0A0B4J241 112 aa11.84□□□□□ -0.51
PDLIM7-202ENST00000355841 TRAV8-4A0A0B4J246 113 aa11.84□□□□□ -0.51
PDLIM7-202ENST00000355841 C20orf202A1L168 122 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms