RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 TRIAP1O43715 76 aa10.9□□□□□ -0.66
TFE3-201ENST00000315869 PDZD2O15018 2839 aa10.9□□□□□ -0.66
TFE3-201ENST00000315869 EIF4EBP3O60516 100 aaPredicted RBP10.9□□□□□ -0.67
TFE3-201ENST00000315869 ADAMTSL4-AS1Q5T5F5 129 aa10.9□□□□□ -0.67
TFE3-201ENST00000315869 Q6ZSN1 163 aa10.9□□□□□ -0.67
TFE3-201ENST00000315869 SMR3AQ99954 134 aa10.9□□□□□ -0.67
TFE3-201ENST00000315869 TMEM61Q8N0U2 210 aa10.89□□□□□ -0.67
TFE3-201ENST00000315869 NBEAL1Q6ZS30 2694 aa10.89□□□□□ -0.67
TFE3-201ENST00000315869 RNF183Q96D59 192 aa10.89□□□□□ -0.67
TFE3-201ENST00000315869 TRAV13-1A0A0B4J241 112 aa10.88□□□□□ -0.67
TFE3-201ENST00000315869 ZNF415Q09FC8 603 aa10.88□□□□□ -0.67
TFE3-201ENST00000315869 ODF3Q96PU9 254 aa10.88□□□□□ -0.67
TFE3-201ENST00000315869 LINC00467Q9BRT7 94 aa10.88□□□□□ -0.67
TFE3-201ENST00000315869 IGKV3OR2-268A0A0C4DH90 116 aa10.88□□□□□ -0.67
TFE3-201ENST00000315869 GAGE2BQ13066 116 aa10.88□□□□□ -0.67
TFE3-201ENST00000315869 GAGE2EQ4V326 116 aa10.88□□□□□ -0.67
TFE3-201ENST00000315869 GAGE2DQ9UEU5 116 aa10.88□□□□□ -0.67
TFE3-201ENST00000315869 A0A0B4J2C4 111 aa10.87□□□□□ -0.67
TFE3-201ENST00000315869 BRI3O95415 125 aa10.87□□□□□ -0.67
TFE3-201ENST00000315869 TRAV8-4A0A0B4J246 113 aa10.87□□□□□ -0.67
TFE3-201ENST00000315869 IGHV1-58A0A0C4DH39 117 aa10.87□□□□□ -0.67
TFE3-201ENST00000315869 PLA2G2AP14555 144 aa10.87□□□□□ -0.67
TFE3-201ENST00000315869 CDKN2A-AS1Q9UH64 79 aa10.87□□□□□ -0.67
TFE3-201ENST00000315869 RPL13AP40429 203 aaKnown RBP10.87□□□□□ -0.67
TFE3-201ENST00000315869 YAE1D1Q9NRH1 226 aa10.87□□□□□ -0.67
TFE3-201ENST00000315869 J3QKU1 62 aa10.86□□□□□ -0.67
TFE3-201ENST00000315869 VPREB3Q9UKI3 123 aa10.86□□□□□ -0.67
TFE3-201ENST00000315869 ICOSQ9Y6W8 199 aa10.86□□□□□ -0.67
TFE3-201ENST00000315869 TRGV1A0A0A0MS02 117 aa10.86□□□□□ -0.67
TFE3-201ENST00000315869 MEIG1Q5JSS6 88 aa10.86□□□□□ -0.67
TFE3-201ENST00000315869 KRTAP1-3Q8IUG1 177 aa10.86□□□□□ -0.67
TFE3-201ENST00000315869 H3BMM0 161 aa10.86□□□□□ -0.67
TFE3-201ENST00000315869 TTC32Q5I0X7 151 aa10.86□□□□□ -0.67
TFE3-201ENST00000315869 UBE2WQ96B02 151 aa10.85□□□□□ -0.67
TFE3-201ENST00000315869 GATA3P23771 443 aa10.84□□□□□ -0.67
TFE3-201ENST00000315869 CIRBPQ14011 172 aaKnown RBP10.84□□□□□ -0.67
TFE3-201ENST00000315869 VSIG2Q96IQ7 327 aa10.84□□□□□ -0.67
TFE3-201ENST00000315869 OTOGQ6ZRI0 2925 aa10.83□□□□□ -0.68
TFE3-201ENST00000315869 RBMY1BA6NDE4 496 aaKnown RBP10.83□□□□□ -0.68
TFE3-201ENST00000315869 RBMY1EA6NEQ0 496 aaKnown RBP10.83□□□□□ -0.68
TFE3-201ENST00000315869 RBMY1DP0C7P1 496 aaKnown RBP10.83□□□□□ -0.68
TFE3-201ENST00000315869 MRPS36P82909 103 aaKnown RBP10.83□□□□□ -0.68
TFE3-201ENST00000315869 TRAV4A0A0B4J268 109 aa10.83□□□□□ -0.68
TFE3-201ENST00000315869 Q9H8V8 135 aa10.83□□□□□ -0.68
TFE3-201ENST00000315869 NDUFA7O95182 113 aa10.83□□□□□ -0.68
TFE3-201ENST00000315869 C15orf53Q8NAA6 179 aa10.83□□□□□ -0.68
TFE3-201ENST00000315869 TRBV10-2A0A0K0K1G8 114 aa10.82□□□□□ -0.68
TFE3-201ENST00000315869 UBE2D4Q9Y2X8 147 aa10.82□□□□□ -0.68
TFE3-201ENST00000315869 STAB1Q9NY15 2570 aa10.82□□□□□ -0.68
TFE3-201ENST00000315869 NOTCH1P46531 2555 aa10.81□□□□□ -0.68
TFE3-201ENST00000315869 CRLF1O75462 422 aa10.81□□□□□ -0.68
TFE3-201ENST00000315869 MIAQ16674 131 aa10.81□□□□□ -0.68
TFE3-201ENST00000315869 SPANXA1Q9NS26 97 aa10.81□□□□□ -0.68
TFE3-201ENST00000315869 PYGO1Q9Y3Y4 419 aa10.81□□□□□ -0.68
TFE3-201ENST00000315869 PEMTQ9UBM1 199 aa10.81□□□□□ -0.68
TFE3-201ENST00000315869 MGAM2Q2M2H8 2515 aa10.81□□□□□ -0.68
TFE3-201ENST00000315869 SBSPONQ8IVN8 264 aa10.81□□□□□ -0.68
TFE3-201ENST00000315869 CHCHD7Q9BUK0 85 aa10.81□□□□□ -0.68
TFE3-201ENST00000315869 ZNF702PQ9H963 129 aa10.81□□□□□ -0.68
TFE3-201ENST00000315869 B5MCH6 92 aa10.8□□□□□ -0.68
TFE3-201ENST00000315869 INSP01308 110 aa10.8□□□□□ -0.68
TFE3-201ENST00000315869 Q6YL49 198 aa10.8□□□□□ -0.68
TFE3-201ENST00000315869 TOMM7Q9P0U1 55 aa10.8□□□□□ -0.68
TFE3-201ENST00000315869 GAGE12JA6NER3 117 aa10.8□□□□□ -0.68
TFE3-201ENST00000315869 GAGE4Q13068 117 aa10.8□□□□□ -0.68
TFE3-201ENST00000315869 GAGE5Q13069 117 aa10.8□□□□□ -0.68
TFE3-201ENST00000315869 PRIMA1Q86XR5 153 aa10.8□□□□□ -0.68
TFE3-201ENST00000315869 STHQ8IWL8 128 aa10.8□□□□□ -0.68
TFE3-201ENST00000315869 COL6A5A8TX70 2615 aa10.8□□□□□ -0.68
TFE3-201ENST00000315869 TINCRA0A1B0GVN0 87 aa10.8□□□□□ -0.68
TFE3-201ENST00000315869 MAP6D1Q9H9H5 199 aa10.8□□□□□ -0.68
TFE3-201ENST00000315869 HIVEP1P15822 2718 aa10.79□□□□□ -0.68
TFE3-201ENST00000315869 TRBV30A0A0K0K1B3 111 aa10.79□□□□□ -0.68
TFE3-201ENST00000315869 SS18L2Q9UHA2 77 aa10.79□□□□□ -0.68
TFE3-201ENST00000315869 J3QLI3 93 aa10.78□□□□□ -0.68
TFE3-201ENST00000315869 H7C423 109 aa10.78□□□□□ -0.68
TFE3-201ENST00000315869 COX6A2Q02221 97 aa10.78□□□□□ -0.68
TFE3-201ENST00000315869 LITAFQ99732 161 aa10.78□□□□□ -0.68
TFE3-201ENST00000315869 TMEM101Q96IK0 257 aa10.78□□□□□ -0.68
TFE3-201ENST00000315869 TMEM89A2RUT3 159 aa10.77□□□□□ -0.69
TFE3-201ENST00000315869 FAM104AQ969W3 186 aa10.77□□□□□ -0.69
TFE3-201ENST00000315869 LINC00694P0DN24 101 aa10.76□□□□□ -0.69
TFE3-201ENST00000315869 RPL36AP83881 106 aaKnown RBP10.76□□□□□ -0.69
TFE3-201ENST00000315869 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.76□□□□□ -0.69
TFE3-201ENST00000315869 RPL36ALQ969Q0 106 aaKnown RBP10.76□□□□□ -0.69
TFE3-201ENST00000315869 UBE2L6O14933 153 aa10.75□□□□□ -0.69
TFE3-201ENST00000315869 ESM1Q9NQ30 184 aa10.75□□□□□ -0.69
TFE3-201ENST00000315869 Q6ZTI0 123 aa10.74□□□□□ -0.69
TFE3-201ENST00000315869 SPANXDQ9BXN6 97 aa10.74□□□□□ -0.69
TFE3-201ENST00000315869 SPANXCQ9NY87 97 aa10.74□□□□□ -0.69
TFE3-201ENST00000315869 TRGV2A0A075B6R0 118 aa10.74□□□□□ -0.69
TFE3-201ENST00000315869 BAHCC1Q9P281 2608 aa10.74□□□□□ -0.69
TFE3-201ENST00000315869 FSHBP01225 129 aa10.74□□□□□ -0.69
TFE3-201ENST00000315869 IFITM1P13164 125 aa10.73□□□□□ -0.69
TFE3-201ENST00000315869 AKAP9Q99996 3911 aa10.73□□□□□ -0.69
TFE3-201ENST00000315869 RPL35AP18077 110 aaKnown RBP10.73□□□□□ -0.69
TFE3-201ENST00000315869 NOP10Q9NPE3 64 aaKnown RBP10.73□□□□□ -0.69
TFE3-201ENST00000315869 DNAJC9-AS1A6NH13 148 aa10.72□□□□□ -0.69
TFE3-201ENST00000315869 DEFB114Q30KQ6 69 aa10.72□□□□□ -0.69
TFE3-201ENST00000315869 NDUFV3P56181 108 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms