RNA–Protein interactions for RNA: ENST00000297265.4

CHMP4C-201, Transcript of charged multivesicular body protein 4C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4C-201ENST00000297265 EGFEM1PQ0D2K5 195 aa9.55□□□□□ -0.88
CHMP4C-201ENST00000297265 HSD52Q0P140 79 aa9.55□□□□□ -0.88
CHMP4C-201ENST00000297265 FAM222AQ5U5X8 452 aa9.55□□□□□ -0.88
CHMP4C-201ENST00000297265 SHISA2Q6UWI4 295 aa9.55□□□□□ -0.88
CHMP4C-201ENST00000297265 Q8NAQ8 132 aa9.55□□□□□ -0.88
CHMP4C-201ENST00000297265 IGHV4-28A0A0C4DH34 117 aa9.55□□□□□ -0.88
CHMP4C-201ENST00000297265 TMEM223A0PJW6 202 aa9.55□□□□□ -0.88
CHMP4C-201ENST00000297265 TAX1BP3O14907 124 aa9.54□□□□□ -0.88
CHMP4C-201ENST00000297265 ZNF25P17030 456 aaPredicted RBP9.54□□□□□ -0.88
CHMP4C-201ENST00000297265 RNF183Q96D59 192 aa9.54□□□□□ -0.88
CHMP4C-201ENST00000297265 CSDC2Q9Y534 153 aaKnown RBP9.54□□□□□ -0.88
CHMP4C-201ENST00000297265 LYRM9A8MSI8 78 aa9.53□□□□□ -0.88
CHMP4C-201ENST00000297265 ORAOV1Q8WV07 137 aa9.53□□□□□ -0.88
CHMP4C-201ENST00000297265 K7EP13 123 aa9.53□□□□□ -0.88
CHMP4C-201ENST00000297265 UBE2D1P51668 147 aa9.52□□□□□ -0.89
CHMP4C-201ENST00000297265 SEC11AP67812 179 aa9.52□□□□□ -0.89
CHMP4C-201ENST00000297265 PLEKHB2Q96CS7 222 aa9.52□□□□□ -0.89
CHMP4C-201ENST00000297265 CELA1Q9UNI1 258 aa9.52□□□□□ -0.89
CHMP4C-201ENST00000297265 COX11Q9Y6N1 276 aa9.52□□□□□ -0.89
CHMP4C-201ENST00000297265 TINCRA0A1B0GVN0 87 aa9.51□□□□□ -0.89
CHMP4C-201ENST00000297265 FXYD2P54710 66 aa9.51□□□□□ -0.89
CHMP4C-201ENST00000297265 TM2D2Q9BX73 214 aa9.51□□□□□ -0.89
CHMP4C-201ENST00000297265 ZNF815PA8K554 130 aa9.51□□□□□ -0.89
CHMP4C-201ENST00000297265 MIFP14174 115 aa9.51□□□□□ -0.89
CHMP4C-201ENST00000297265 HERVK_113P61574 105 aa9.51□□□□□ -0.89
CHMP4C-201ENST00000297265 CDC42SE2Q9NRR3 84 aa9.51□□□□□ -0.89
CHMP4C-201ENST00000297265 A8MZ25 164 aa9.5□□□□□ -0.89
CHMP4C-201ENST00000297265 TRBV6-8A0A0A6YYG3 113 aa9.49□□□□□ -0.89
CHMP4C-201ENST00000297265 J3QQQ9 107 aa9.49□□□□□ -0.89
CHMP4C-201ENST00000297265 COX6A2Q02221 97 aa9.49□□□□□ -0.89
CHMP4C-201ENST00000297265 FAM19A3Q7Z5A8 133 aa9.49□□□□□ -0.89
CHMP4C-201ENST00000297265 CEND1Q8N111 149 aa9.49□□□□□ -0.89
CHMP4C-201ENST00000297265 TMEM243Q9BU79 118 aa9.49□□□□□ -0.89
CHMP4C-201ENST00000297265 PRO0255Q9UI72 69 aa9.49□□□□□ -0.89
CHMP4C-201ENST00000297265 FBN3Q75N90 2809 aa9.49□□□□□ -0.89
CHMP4C-201ENST00000297265 LEPROTO15243 131 aa9.49□□□□□ -0.89
CHMP4C-201ENST00000297265 GYPEP15421 78 aa9.49□□□□□ -0.89
CHMP4C-201ENST00000297265 DGAT2L7PQ6IED9 249 aa9.49□□□□□ -0.89
CHMP4C-201ENST00000297265 VSIG2Q96IQ7 327 aa9.49□□□□□ -0.89
CHMP4C-201ENST00000297265 IGHV3-64A0A075B6Q5 118 aa9.48□□□□□ -0.89
CHMP4C-201ENST00000297265 IGLV5-45A0A087WSX0 123 aa9.48□□□□□ -0.89
CHMP4C-201ENST00000297265 TRAV8-3A0A0A6YYJ7 113 aa9.48□□□□□ -0.89
CHMP4C-201ENST00000297265 A0A0J9YY99 117 aa9.48□□□□□ -0.89
CHMP4C-201ENST00000297265 G3V4G9 280 aa9.48□□□□□ -0.89
CHMP4C-201ENST00000297265 GCSHP23434 173 aa9.48□□□□□ -0.89
CHMP4C-201ENST00000297265 TIRAPP58753 221 aa9.48□□□□□ -0.89
CHMP4C-201ENST00000297265 TAL2Q16559 108 aa9.48□□□□□ -0.89
CHMP4C-201ENST00000297265 LINC00242Q5T6M2 205 aa9.48□□□□□ -0.89
CHMP4C-201ENST00000297265 H7C423 109 aa9.47□□□□□ -0.89
CHMP4C-201ENST00000297265 IGHV3-30-3P0DP02 117 aa9.47□□□□□ -0.89
CHMP4C-201ENST00000297265 CDKN2A-AS1Q9UH64 79 aa9.47□□□□□ -0.89
CHMP4C-201ENST00000297265 ATP6V0E2Q8NHE4 81 aa9.46□□□□□ -0.9
CHMP4C-201ENST00000297265 IGLV4-60A0A075B6I1 120 aa9.45□□□□□ -0.9
CHMP4C-201ENST00000297265 IGHV1-58A0A0C4DH39 117 aa9.45□□□□□ -0.9
CHMP4C-201ENST00000297265 A6NDN8 102 aa9.45□□□□□ -0.9
CHMP4C-201ENST00000297265 H3BRM9 83 aa9.45□□□□□ -0.9
CHMP4C-201ENST00000297265 DAD1P61803 113 aa9.45□□□□□ -0.9
CHMP4C-201ENST00000297265 OR5A1Q8NGJ0 315 aa9.45□□□□□ -0.9
CHMP4C-201ENST00000297265 HIST1H4GQ99525 98 aa9.45□□□□□ -0.9
CHMP4C-201ENST00000297265 SPART-AS1P0CW21 52 aa9.45□□□□□ -0.9
CHMP4C-201ENST00000297265 GAGE6Q13070 117 aa9.45□□□□□ -0.9
CHMP4C-201ENST00000297265 C10orf126Q8N4M7 172 aa9.45□□□□□ -0.9
CHMP4C-201ENST00000297265 TENM3Q9P273 2699 aa9.44□□□□□ -0.9
CHMP4C-201ENST00000297265 NOTCH1P46531 2555 aa9.44□□□□□ -0.9
CHMP4C-201ENST00000297265 UBE2L6O14933 153 aa9.44□□□□□ -0.9
CHMP4C-201ENST00000297265 PAX4O43316 350 aa9.44□□□□□ -0.9
CHMP4C-201ENST00000297265 SPINK8P0C7L1 97 aa9.44□□□□□ -0.9
CHMP4C-201ENST00000297265 LGALS3P17931 250 aaKnown RBP9.44□□□□□ -0.9
CHMP4C-201ENST00000297265 SCGB1D4Q6XE38 83 aa9.44□□□□□ -0.9
CHMP4C-201ENST00000297265 LINC00469Q8N7U9 141 aa9.44□□□□□ -0.9
CHMP4C-201ENST00000297265 RETNQ9HD89 108 aa9.44□□□□□ -0.9
CHMP4C-201ENST00000297265 NBEAL1Q6ZS30 2694 aa9.43□□□□□ -0.9
CHMP4C-201ENST00000297265 SAMD5Q5TGI4 173 aa9.43□□□□□ -0.9
CHMP4C-201ENST00000297265 AMMECR1LQ6DCA0 310 aa9.43□□□□□ -0.9
CHMP4C-201ENST00000297265 GEMIN7Q9H840 131 aaKnown RBP9.43□□□□□ -0.9
CHMP4C-201ENST00000297265 A0A096LPF7 62 aa9.42□□□□□ -0.9
CHMP4C-201ENST00000297265 TRAV13-1A0A0B4J241 112 aa9.42□□□□□ -0.9
CHMP4C-201ENST00000297265 ATP5G1P05496 136 aa9.42□□□□□ -0.9
CHMP4C-201ENST00000297265 SPANXB1Q9NS25 103 aaPredicted RBP9.42□□□□□ -0.9
CHMP4C-201ENST00000297265 K7ERJ3 54 aa9.42□□□□□ -0.9
CHMP4C-201ENST00000297265 HERVK_113P63121 156 aa9.42□□□□□ -0.9
CHMP4C-201ENST00000297265 SMAGPQ0VAQ4 97 aa9.42□□□□□ -0.9
CHMP4C-201ENST00000297265 TMEM101Q96IK0 257 aa9.42□□□□□ -0.9
CHMP4C-201ENST00000297265 CHCHD5Q9BSY4 110 aa9.42□□□□□ -0.9
CHMP4C-201ENST00000297265 TRAV26-1A0A087WT03 109 aa9.41□□□□□ -0.9
CHMP4C-201ENST00000297265 IGLV5-39A0A0G2JS06 123 aa9.41□□□□□ -0.9
CHMP4C-201ENST00000297265 C9orf118A6NHY6 69 aa9.41□□□□□ -0.9
CHMP4C-201ENST00000297265 F5H768 121 aa9.41□□□□□ -0.9
CHMP4C-201ENST00000297265 RAB37Q96AX2 223 aa9.41□□□□□ -0.9
CHMP4C-201ENST00000297265 NHP2Q9NX24 153 aaKnown RBP9.41□□□□□ -0.9
CHMP4C-201ENST00000297265 A0A1B0GWB2 263 aa9.4□□□□□ -0.9
CHMP4C-201ENST00000297265 IGHV3-30P01768 117 aa9.4□□□□□ -0.9
CHMP4C-201ENST00000297265 SMIM13P0DJ93 91 aa9.4□□□□□ -0.9
CHMP4C-201ENST00000297265 IGHV3-30-5P0DP03 117 aa9.4□□□□□ -0.9
CHMP4C-201ENST00000297265 PTTG1IPP53801 180 aa9.4□□□□□ -0.9
CHMP4C-201ENST00000297265 C12orf74Q32Q52 190 aa9.4□□□□□ -0.9
CHMP4C-201ENST00000297265 LITAFQ99732 161 aa9.4□□□□□ -0.9
CHMP4C-201ENST00000297265 A0A0J9YXY3 114 aa9.4□□□□□ -0.91
CHMP4C-201ENST00000297265 CCL25O15444 150 aa9.4□□□□□ -0.91
CHMP4C-201ENST00000297265 NAA38Q9BRA0 125 aaKnown RBP9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms