RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 GCN1Q92616 2671 aaKnown RBP2.14□□□□□ -2.07
HERC4-201ENST00000277817 INAFM1C9JVW0 142 aa2.14□□□□□ -2.07
HERC4-201ENST00000277817 CRLF1O75462 422 aa2.14□□□□□ -2.07
HERC4-201ENST00000277817 CTRLP40313 264 aa2.14□□□□□ -2.07
HERC4-201ENST00000277817 CMC4P56277 68 aaPredicted RBP2.14□□□□□ -2.07
HERC4-201ENST00000277817 GATD1Q8NB37 220 aa2.14□□□□□ -2.07
HERC4-201ENST00000277817 MPLKIPQ8TAP9 179 aa2.14□□□□□ -2.07
HERC4-201ENST00000277817 SCRT2Q9NQ03 307 aa2.14□□□□□ -2.07
HERC4-201ENST00000277817 TP73-AS1Q9UF72 201 aa2.14□□□□□ -2.07
HERC4-201ENST00000277817 SPINK8P0C7L1 97 aa2.14□□□□□ -2.07
HERC4-201ENST00000277817 PFN2P35080 140 aa2.14□□□□□ -2.07
HERC4-201ENST00000277817 ZNF493Q6ZR52 646 aa2.14□□□□□ -2.07
HERC4-201ENST00000277817 C1QTNF4Q9BXJ3 329 aa2.14□□□□□ -2.07
HERC4-201ENST00000277817 PRO1854Q9UHT4 67 aa2.14□□□□□ -2.07
HERC4-201ENST00000277817 NDUFA12Q9UI09 145 aa2.14□□□□□ -2.07
HERC4-201ENST00000277817 TP53TG3Q9ULZ0 132 aa2.14□□□□□ -2.07
HERC4-201ENST00000277817 LENEPQ9Y5L5 61 aa2.14□□□□□ -2.07
HERC4-201ENST00000277817 TRRAPQ9Y4A5 3859 aa2.14□□□□□ -2.07
HERC4-201ENST00000277817 OTOGQ6ZRI0 2925 aa2.13□□□□□ -2.07
HERC4-201ENST00000277817 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.13□□□□□ -2.07
HERC4-201ENST00000277817 A0A096LPF7 62 aa2.13□□□□□ -2.07
HERC4-201ENST00000277817 A0A1B0GXF2 115 aa2.13□□□□□ -2.07
HERC4-201ENST00000277817 IGKV2-29A2NJV5 120 aaPredicted RBP2.13□□□□□ -2.07
HERC4-201ENST00000277817 F8W1H4 67 aa2.13□□□□□ -2.07
HERC4-201ENST00000277817 FGF6P10767 208 aa2.13□□□□□ -2.07
HERC4-201ENST00000277817 LINC00310P59036 64 aa2.13□□□□□ -2.07
HERC4-201ENST00000277817 RPL39P62891 51 aaKnown RBP2.13□□□□□ -2.07
HERC4-201ENST00000277817 RPL18AQ02543 176 aaKnown RBP2.13□□□□□ -2.07
HERC4-201ENST00000277817 S100A7L2Q5SY68 101 aa2.13□□□□□ -2.07
HERC4-201ENST00000277817 C10orf105Q8TEF2 133 aa2.13□□□□□ -2.07
HERC4-201ENST00000277817 JPT2Q9H910 190 aa2.13□□□□□ -2.07
HERC4-201ENST00000277817 RETNQ9HD89 108 aa2.13□□□□□ -2.07
HERC4-201ENST00000277817 ATMQ13315 3056 aa2.13□□□□□ -2.07
HERC4-201ENST00000277817 KRTAP4-8A0A0G2JLE6 195 aa2.13□□□□□ -2.07
HERC4-201ENST00000277817 KLLNB2CW77 178 aa2.13□□□□□ -2.07
HERC4-201ENST00000277817 H3BUA1 57 aa2.13□□□□□ -2.07
HERC4-201ENST00000277817 LEPROTO15243 131 aa2.13□□□□□ -2.07
HERC4-201ENST00000277817 CRYGDP07320 174 aa2.13□□□□□ -2.07
HERC4-201ENST00000277817 CRIP1P50238 77 aa2.13□□□□□ -2.07
HERC4-201ENST00000277817 FXYD2P54710 66 aa2.13□□□□□ -2.07
HERC4-201ENST00000277817 FBXL19-AS1Q494R0 122 aa2.13□□□□□ -2.07
HERC4-201ENST00000277817 SUMO4Q6EEV6 95 aa2.13□□□□□ -2.07
HERC4-201ENST00000277817 ZFAND6Q6FIF0 208 aa2.13□□□□□ -2.07
HERC4-201ENST00000277817 SH2D6Q7Z4S9 175 aa2.13□□□□□ -2.07
HERC4-201ENST00000277817 KRTAP9-9Q9BYP9 154 aa2.13□□□□□ -2.07
HERC4-201ENST00000277817 KRTAP9-4Q9BYQ2 154 aa2.13□□□□□ -2.07
HERC4-201ENST00000277817 VPREB3Q9UKI3 123 aa2.13□□□□□ -2.07
HERC4-201ENST00000277817 A0A0J9YXV3 536 aa2.13□□□□□ -2.07
HERC4-201ENST00000277817 C19orf84I3L1E1 186 aa2.13□□□□□ -2.07
HERC4-201ENST00000277817 TAX1BP3O14907 124 aa2.13□□□□□ -2.07
HERC4-201ENST00000277817 SLC25A20O43772 301 aa2.13□□□□□ -2.07
HERC4-201ENST00000277817 CRPP02741 224 aa2.13□□□□□ -2.07
HERC4-201ENST00000277817 C4orf26Q17RF5 130 aa2.13□□□□□ -2.07
HERC4-201ENST00000277817 UFSP1Q6NVU6 142 aa2.13□□□□□ -2.07
HERC4-201ENST00000277817 ZFP2Q6ZN57 461 aa2.13□□□□□ -2.07
HERC4-201ENST00000277817 FOXI2Q6ZQN5 318 aa2.13□□□□□ -2.07
HERC4-201ENST00000277817 C9orf47Q6ZRZ4 202 aa2.13□□□□□ -2.07
HERC4-201ENST00000277817 NOP10Q9NPE3 64 aaKnown RBP2.13□□□□□ -2.07
HERC4-201ENST00000277817 MDFICQ9P1T7 246 aa2.13□□□□□ -2.07
HERC4-201ENST00000277817 TRIOO75962 3097 aa2.13□□□□□ -2.07
HERC4-201ENST00000277817 TRBV20-1A0A075B6N2 111 aa2.12□□□□□ -2.07
HERC4-201ENST00000277817 LGALS1P09382 135 aaKnown RBP2.12□□□□□ -2.07
HERC4-201ENST00000277817 C6orf223Q8N319 242 aa2.12□□□□□ -2.07
HERC4-201ENST00000277817 IGSF10Q6WRI0 2623 aa2.12□□□□□ -2.07
HERC4-201ENST00000277817 DSCAMO60469 2012 aa2.12□□□□□ -2.07
HERC4-201ENST00000277817 IGHV4OR15-8A0A075B7B6 117 aa2.12□□□□□ -2.07
HERC4-201ENST00000277817 A0A087WW49 117 aa2.12□□□□□ -2.07
HERC4-201ENST00000277817 ODF3BA8MYP8 253 aa2.12□□□□□ -2.07
HERC4-201ENST00000277817 IGLL5B9A064 214 aa2.12□□□□□ -2.07
HERC4-201ENST00000277817 F5H768 121 aa2.12□□□□□ -2.07
HERC4-201ENST00000277817 LY6LH3BQJ8 138 aa2.12□□□□□ -2.07
HERC4-201ENST00000277817 SS18Q15532 418 aa2.12□□□□□ -2.07
HERC4-201ENST00000277817 OPRPNQ99935 248 aaPredicted RBP2.12□□□□□ -2.07
HERC4-201ENST00000277817 ZZEF1O43149 2961 aa2.12□□□□□ -2.07
HERC4-201ENST00000277817 TRBV6-1A0A0K0K1D8 114 aa2.12□□□□□ -2.07
HERC4-201ENST00000277817 TEX48A0A1B0GUV7 120 aa2.12□□□□□ -2.07
HERC4-201ENST00000277817 K7EQD1 137 aa2.12□□□□□ -2.07
HERC4-201ENST00000277817 WFDC2Q14508 124 aa2.12□□□□□ -2.07
HERC4-201ENST00000277817 DEFB121Q5J5C9 76 aa2.12□□□□□ -2.07
HERC4-201ENST00000277817 NTN5Q8WTR8 489 aaPredicted RBP2.12□□□□□ -2.07
HERC4-201ENST00000277817 TMEM243Q9BU79 118 aa2.12□□□□□ -2.07
HERC4-201ENST00000277817 RNF114Q9Y508 228 aa2.12□□□□□ -2.07
HERC4-201ENST00000277817 IGLV5-37A0A075B6J1 123 aa2.12□□□□□ -2.07
HERC4-201ENST00000277817 IGLV2-11P01706 119 aa2.12□□□□□ -2.07
HERC4-201ENST00000277817 CFC1BP0CG36 223 aa2.12□□□□□ -2.07
HERC4-201ENST00000277817 CFC1P0CG37 223 aa2.12□□□□□ -2.07
HERC4-201ENST00000277817 MYCNOSP40205 109 aa2.12□□□□□ -2.07
HERC4-201ENST00000277817 HIST1H4AP62805 103 aaKnown RBP2.12□□□□□ -2.07
HERC4-201ENST00000277817 CLPSL2Q6UWE3 100 aa2.12□□□□□ -2.07
HERC4-201ENST00000277817 SPATA12Q7Z6I5 190 aa2.12□□□□□ -2.07
HERC4-201ENST00000277817 KRTAP1-3Q8IUG1 177 aa2.12□□□□□ -2.07
HERC4-201ENST00000277817 PPDPFLQ8WWR9 84 aa2.12□□□□□ -2.07
HERC4-201ENST00000277817 LAMTOR3Q9UHA4 124 aa2.12□□□□□ -2.07
HERC4-201ENST00000277817 SMAD5-AS1Q9Y6J3 95 aa2.12□□□□□ -2.07
HERC4-201ENST00000277817 SMG1Q96Q15 3661 aaKnown RBP2.11□□□□□ -2.07
HERC4-201ENST00000277817 GPHB5Q86YW7 130 aa2.11□□□□□ -2.07
HERC4-201ENST00000277817 MUSTN1Q8IVN3 82 aa2.11□□□□□ -2.07
HERC4-201ENST00000277817 A0A0J9YY99 117 aa2.11□□□□□ -2.07
HERC4-201ENST00000277817 C11orf86A6NJI1 115 aa2.11□□□□□ -2.07
HERC4-201ENST00000277817 RHOHQ15669 191 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms