RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 ZNF815PA8K554 130 aa2.27□□□□□ -2.05
CCDC54-201ENST00000261058 C5orf67F2Z3F1 127 aa2.27□□□□□ -2.05
CCDC54-201ENST00000261058 IGKV1-17P01599 117 aa2.27□□□□□ -2.05
CCDC54-201ENST00000261058 ZNF22P17026 224 aaPredicted RBP2.27□□□□□ -2.05
CCDC54-201ENST00000261058 EDDM3BP56851 147 aa2.27□□□□□ -2.05
CCDC54-201ENST00000261058 Q8IYB0 196 aa2.27□□□□□ -2.05
CCDC54-201ENST00000261058 C1orf64Q8NEQ6 169 aa2.27□□□□□ -2.05
CCDC54-201ENST00000261058 UBE2D4Q9Y2X8 147 aa2.27□□□□□ -2.05
CCDC54-201ENST00000261058 SEC16AO15027 2179 aa2.27□□□□□ -2.05
CCDC54-201ENST00000261058 PAPPAQ13219 1627 aa2.27□□□□□ -2.05
CCDC54-201ENST00000261058 MYO9BQ13459 2157 aa2.27□□□□□ -2.05
CCDC54-201ENST00000261058 A0A1B0GU33 70 aa2.26□□□□□ -2.05
CCDC54-201ENST00000261058 SDHAF1A6NFY7 115 aa2.26□□□□□ -2.05
CCDC54-201ENST00000261058 TMEM14DPA8MWL7 114 aa2.26□□□□□ -2.05
CCDC54-201ENST00000261058 MGST1P10620 155 aaKnown RBP2.26□□□□□ -2.05
CCDC54-201ENST00000261058 ROMO1P60602 79 aa2.26□□□□□ -2.05
CCDC54-201ENST00000261058 FAM229BQ4G0N7 80 aa2.26□□□□□ -2.05
CCDC54-201ENST00000261058 KPRPQ5T749 579 aaPredicted RBP2.26□□□□□ -2.05
CCDC54-201ENST00000261058 CASC2Q6XLA1 102 aa2.26□□□□□ -2.05
CCDC54-201ENST00000261058 PSENENQ9NZ42 101 aa2.26□□□□□ -2.05
CCDC54-201ENST00000261058 TIMM9Q9Y5J7 89 aa2.26□□□□□ -2.05
CCDC54-201ENST00000261058 GBF1Q92538 1859 aa2.26□□□□□ -2.05
CCDC54-201ENST00000261058 LAMB2P55268 1798 aa2.26□□□□□ -2.05
CCDC54-201ENST00000261058 RREB1Q92766 1687 aa2.26□□□□□ -2.05
CCDC54-201ENST00000261058 DOCK11Q5JSL3 2073 aa2.26□□□□□ -2.05
CCDC54-201ENST00000261058 SLIT1O75093 1534 aa2.26□□□□□ -2.05
CCDC54-201ENST00000261058 CHKB-CPT1BH3BT56 60 aa2.25□□□□□ -2.05
CCDC54-201ENST00000261058 CRPP02741 224 aa2.25□□□□□ -2.05
CCDC54-201ENST00000261058 CLPSP04118 112 aa2.25□□□□□ -2.05
CCDC54-201ENST00000261058 IFI6P09912 130 aa2.25□□□□□ -2.05
CCDC54-201ENST00000261058 C1orf134Q5TEV5 83 aa2.25□□□□□ -2.05
CCDC54-201ENST00000261058 Q8NAQ8 132 aa2.25□□□□□ -2.05
CCDC54-201ENST00000261058 PROK2Q9HC23 129 aa2.25□□□□□ -2.05
CCDC54-201ENST00000261058 NHSQ6T4R5 1651 aa2.25□□□□□ -2.05
CCDC54-201ENST00000261058 ZNF236Q9UL36 1845 aa2.25□□□□□ -2.05
CCDC54-201ENST00000261058 SCN3AQ9NY46 2000 aa2.25□□□□□ -2.05
CCDC54-201ENST00000261058 ADAMTS7Q9UKP4 1686 aa2.25□□□□□ -2.05
CCDC54-201ENST00000261058 KDM6BO15054 1643 aa2.25□□□□□ -2.05
CCDC54-201ENST00000261058 TRBV30A0A0K0K1B3 111 aa2.25□□□□□ -2.05
CCDC54-201ENST00000261058 B4DSR2 109 aa2.25□□□□□ -2.05
CCDC54-201ENST00000261058 E7EUB6 86 aa2.25□□□□□ -2.05
CCDC54-201ENST00000261058 H7C2G1 150 aa2.25□□□□□ -2.05
CCDC54-201ENST00000261058 Q5VV11 94 aa2.25□□□□□ -2.05
CCDC54-201ENST00000261058 SFTA2Q6UW10 78 aa2.25□□□□□ -2.05
CCDC54-201ENST00000261058 TMEM14BQ9NUH8 114 aa2.25□□□□□ -2.05
CCDC54-201ENST00000261058 MGAMO43451 1857 aa2.25□□□□□ -2.05
CCDC54-201ENST00000261058 SHROOM3Q8TF72 1996 aa2.24□□□□□ -2.05
CCDC54-201ENST00000261058 KIAA1549Q9HCM3 1950 aa2.24□□□□□ -2.05
CCDC54-201ENST00000261058 COL4A6Q14031 1691 aa2.24□□□□□ -2.05
CCDC54-201ENST00000261058 DLG5Q8TDM6 1919 aa2.24□□□□□ -2.05
CCDC54-201ENST00000261058 LRP5O75197 1615 aa2.24□□□□□ -2.05
CCDC54-201ENST00000261058 TRBV6-8A0A0A6YYG3 113 aa2.24□□□□□ -2.05
CCDC54-201ENST00000261058 SMIM27A0A1W2PRY6 76 aa2.24□□□□□ -2.05
CCDC54-201ENST00000261058 FCER1GP30273 86 aa2.24□□□□□ -2.05
CCDC54-201ENST00000261058 SPINT3P49223 89 aa2.24□□□□□ -2.05
CCDC54-201ENST00000261058 C10orf128Q5T292 105 aa2.24□□□□□ -2.05
CCDC54-201ENST00000261058 GDF5OSQ5U4N7 250 aa2.24□□□□□ -2.05
CCDC54-201ENST00000261058 SPINT4Q6UDR6 99 aa2.24□□□□□ -2.05
CCDC54-201ENST00000261058 C14orf132Q9NPU4 83 aa2.24□□□□□ -2.05
CCDC54-201ENST00000261058 SHPRHQ149N8 1683 aa2.23□□□□□ -2.05
CCDC54-201ENST00000261058 PLXNA2O75051 1894 aa2.23□□□□□ -2.05
CCDC54-201ENST00000261058 DDX60LQ5H9U9 1706 aaKnown RBP2.23□□□□□ -2.05
CCDC54-201ENST00000261058 ANKRD36A6QL64 1941 aa2.23□□□□□ -2.05
CCDC54-201ENST00000261058 TRAV23DV6A0A075B6W5 121 aa2.23□□□□□ -2.05
CCDC54-201ENST00000261058 CTXND1A0A1B0GTU2 59 aa2.23□□□□□ -2.05
CCDC54-201ENST00000261058 FAM27BQ5VT28 67 aa2.23□□□□□ -2.05
CCDC54-201ENST00000261058 Q6ZQT0 140 aa2.23□□□□□ -2.05
CCDC54-201ENST00000261058 CDC42SE2Q9NRR3 84 aa2.23□□□□□ -2.05
CCDC54-201ENST00000261058 V9GYV3 84 aa2.23□□□□□ -2.05
CCDC54-201ENST00000261058 NRXN3Q9Y4C0 1643 aa2.23□□□□□ -2.05
CCDC54-201ENST00000261058 LTBP2Q14767 1821 aa2.23□□□□□ -2.05
CCDC54-201ENST00000261058 PCNX2A6NKB5 2137 aa2.22□□□□□ -2.05
CCDC54-201ENST00000261058 IGHV1-18A0A0C4DH31 117 aa2.22□□□□□ -2.05
CCDC54-201ENST00000261058 LOC101927531A0A1B0GV80 90 aa2.22□□□□□ -2.05
CCDC54-201ENST00000261058 D6R8Y8 96 aa2.22□□□□□ -2.05
CCDC54-201ENST00000261058 ARMS2P0C7Q2 107 aa2.22□□□□□ -2.05
CCDC54-201ENST00000261058 PRB4P10163 310 aaPredicted RBP2.22□□□□□ -2.05
CCDC54-201ENST00000261058 S100A3P33764 101 aa2.22□□□□□ -2.05
CCDC54-201ENST00000261058 MUSTN1Q8IVN3 82 aa2.22□□□□□ -2.05
CCDC54-201ENST00000261058 LY75O60449 1722 aa2.22□□□□□ -2.05
CCDC54-201ENST00000261058 KIAA1549LQ6ZVL6 1849 aa2.21□□□□□ -2.06
CCDC54-201ENST00000261058 IGHV3-64A0A075B6Q5 118 aa2.21□□□□□ -2.06
CCDC54-201ENST00000261058 A0A087WSZ3 146 aa2.21□□□□□ -2.06
CCDC54-201ENST00000261058 C11orf86A6NJI1 115 aa2.21□□□□□ -2.06
CCDC54-201ENST00000261058 PSCAO43653 123 aa2.21□□□□□ -2.06
CCDC54-201ENST00000261058 SAA2P0DJI9 122 aaPredicted RBP2.21□□□□□ -2.06
CCDC54-201ENST00000261058 NNATQ16517 81 aa2.21□□□□□ -2.06
CCDC54-201ENST00000261058 SPANXN5Q5MJ07 72 aa2.21□□□□□ -2.06
CCDC54-201ENST00000261058 Q6ZS52 159 aa2.21□□□□□ -2.06
CCDC54-201ENST00000261058 C22orf24Q9Y442 160 aa2.21□□□□□ -2.06
CCDC54-201ENST00000261058 PAPPA2Q9BXP8 1791 aa2.2□□□□□ -2.06
CCDC54-201ENST00000261058 PRR14LQ5THK1 2151 aa2.2□□□□□ -2.06
CCDC54-201ENST00000261058 MUC4Q99102 2169 aa2.2□□□□□ -2.06
CCDC54-201ENST00000261058 IGLV10-54A0A075B6I4 117 aa2.2□□□□□ -2.06
CCDC54-201ENST00000261058 CXorf51AA0A1B0GTR3 108 aa2.2□□□□□ -2.06
CCDC54-201ENST00000261058 IGHV3-33P01772 117 aa2.2□□□□□ -2.06
CCDC54-201ENST00000261058 BAALC-AS2P0C853 105 aa2.2□□□□□ -2.06
CCDC54-201ENST00000261058 HMGA1P17096 107 aaKnown RBP2.2□□□□□ -2.06
CCDC54-201ENST00000261058 MIR22HGQ0VDD5 57 aa2.2□□□□□ -2.06
CCDC54-201ENST00000261058 WFDC6Q9BQY6 131 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms