RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 BAALCQ8WXS3 180 aa9.08□□□□□ -0.96
DDX39A-201ENST00000242776 KIR2DL4Q99706 377 aa9.08□□□□□ -0.96
DDX39A-201ENST00000242776 SMIM2Q9BVW6 85 aa9.08□□□□□ -0.96
DDX39A-201ENST00000242776 TRBV27A0A0K0K1C4 114 aa9.08□□□□□ -0.96
DDX39A-201ENST00000242776 PRSS47A8MTI9 375 aa9.08□□□□□ -0.96
DDX39A-201ENST00000242776 OXTP01178 125 aa9.08□□□□□ -0.96
DDX39A-201ENST00000242776 TIRAPP58753 221 aa9.08□□□□□ -0.96
DDX39A-201ENST00000242776 KRTAP10-4P60372 401 aaPredicted RBP9.08□□□□□ -0.96
DDX39A-201ENST00000242776 TM2D2Q9BX73 214 aa9.08□□□□□ -0.96
DDX39A-201ENST00000242776 PKHD1L1Q86WI1 4243 aa9.07□□□□□ -0.96
DDX39A-201ENST00000242776 LOC389332A0A1B0GUA5 103 aa9.07□□□□□ -0.96
DDX39A-201ENST00000242776 NXT2Q9NPJ8 142 aaKnown RBP9.07□□□□□ -0.96
DDX39A-201ENST00000242776 FCER1GP30273 86 aa9.06□□□□□ -0.96
DDX39A-201ENST00000242776 Q8N8P6 123 aa9.06□□□□□ -0.96
DDX39A-201ENST00000242776 PRSS3P2Q8NHM4 247 aa9.06□□□□□ -0.96
DDX39A-201ENST00000242776 TRBV25-1A0A075B6N4 114 aa9.05□□□□□ -0.96
DDX39A-201ENST00000242776 C1orf196B1AJZ1 125 aa9.05□□□□□ -0.96
DDX39A-201ENST00000242776 K7EMI3 77 aa9.05□□□□□ -0.96
DDX39A-201ENST00000242776 LELP1Q5T871 98 aa9.05□□□□□ -0.96
DDX39A-201ENST00000242776 CIRBP-AS1Q8TBR5 109 aa9.05□□□□□ -0.96
DDX39A-201ENST00000242776 C18orf32Q8TCD1 76 aa9.05□□□□□ -0.96
DDX39A-201ENST00000242776 TRBV6-8A0A0A6YYG3 113 aa9.04□□□□□ -0.96
DDX39A-201ENST00000242776 IGHV1-24A0A0C4DH33 117 aa9.04□□□□□ -0.96
DDX39A-201ENST00000242776 AMTP48728 403 aa9.04□□□□□ -0.96
DDX39A-201ENST00000242776 RAB5BP61020 215 aa9.04□□□□□ -0.96
DDX39A-201ENST00000242776 FA2HQ7L5A8 372 aa9.04□□□□□ -0.96
DDX39A-201ENST00000242776 CHAC1Q9BUX1 264 aa9.04□□□□□ -0.96
DDX39A-201ENST00000242776 TSHBP01222 138 aa9.03□□□□□ -0.96
DDX39A-201ENST00000242776 IFI27P40305 119 aaPredicted RBP9.03□□□□□ -0.96
DDX39A-201ENST00000242776 IQCJQ1A5X6 159 aa9.03□□□□□ -0.96
DDX39A-201ENST00000242776 PKIAP61925 76 aa9.02□□□□□ -0.96
DDX39A-201ENST00000242776 ORMDL2Q53FV1 153 aa9.02□□□□□ -0.96
DDX39A-201ENST00000242776 TMEM243Q9BU79 118 aa9.02□□□□□ -0.96
DDX39A-201ENST00000242776 UBE2L6O14933 153 aa9.02□□□□□ -0.97
DDX39A-201ENST00000242776 HNRNPA3P51991 378 aaKnown RBP9.02□□□□□ -0.97
DDX39A-201ENST00000242776 Q0VG73 95 aa9.02□□□□□ -0.97
DDX39A-201ENST00000242776 LAGE3Q14657 143 aa9.02□□□□□ -0.97
DDX39A-201ENST00000242776 NTM-AS1Q6ZSK4 140 aa9.02□□□□□ -0.97
DDX39A-201ENST00000242776 BAGE3Q86Y29 109 aa9.02□□□□□ -0.97
DDX39A-201ENST00000242776 TMEM18Q96B42 140 aa9.02□□□□□ -0.97
DDX39A-201ENST00000242776 TRAV8-3A0A0A6YYJ7 113 aa9.01□□□□□ -0.97
DDX39A-201ENST00000242776 G0S2P27469 103 aa9.01□□□□□ -0.97
DDX39A-201ENST00000242776 RPL37AP61513 92 aaKnown RBP9.01□□□□□ -0.97
DDX39A-201ENST00000242776 SMAGPQ0VAQ4 97 aa9.01□□□□□ -0.97
DDX39A-201ENST00000242776 CHCHD5Q9BSY4 110 aa9.01□□□□□ -0.97
DDX39A-201ENST00000242776 AP5S1Q9NUS5 200 aa9.01□□□□□ -0.97
DDX39A-201ENST00000242776 IGKV2D-24A0A075B6R9 120 aa9□□□□□ -0.97
DDX39A-201ENST00000242776 H7C423 109 aa9□□□□□ -0.97
DDX39A-201ENST00000242776 HIST1H2BKO60814 126 aa9□□□□□ -0.97
DDX39A-201ENST00000242776 HIST1H2BJP06899 126 aa9□□□□□ -0.97
DDX39A-201ENST00000242776 LINC00614P0C842 121 aa9□□□□□ -0.97
DDX39A-201ENST00000242776 HIST1H2BOP23527 126 aa9□□□□□ -0.97
DDX39A-201ENST00000242776 HIST1H2BBP33778 126 aa9□□□□□ -0.97
DDX39A-201ENST00000242776 HIST1H2BDP58876 126 aa9□□□□□ -0.97
DDX39A-201ENST00000242776 HIST1H2BCP62807 126 aa9□□□□□ -0.97
DDX39A-201ENST00000242776 HIST2H2BEQ16778 126 aa9□□□□□ -0.97
DDX39A-201ENST00000242776 HIST2H2BFQ5QNW6 126 aaPredicted RBP9□□□□□ -0.97
DDX39A-201ENST00000242776 HIST1H2BHQ93079 126 aa9□□□□□ -0.97
DDX39A-201ENST00000242776 HIST1H2BNQ99877 126 aa9□□□□□ -0.97
DDX39A-201ENST00000242776 HIST1H2BMQ99879 126 aa9□□□□□ -0.97
DDX39A-201ENST00000242776 RNASEKQ6P5S7 137 aaKnown RBP8.99□□□□□ -0.97
DDX39A-201ENST00000242776 NIT1Q86X76 327 aa8.99□□□□□ -0.97
DDX39A-201ENST00000242776 CHCHD1Q96BP2 118 aaKnown RBP8.99□□□□□ -0.97
DDX39A-201ENST00000242776 CHCHD7Q9BUK0 85 aa8.99□□□□□ -0.97
DDX39A-201ENST00000242776 LINC01546A6NGU7 62 aa8.98□□□□□ -0.97
DDX39A-201ENST00000242776 LINC01549A6NIU2 74 aa8.98□□□□□ -0.97
DDX39A-201ENST00000242776 ESDP10768 282 aa8.98□□□□□ -0.97
DDX39A-201ENST00000242776 TMEM262E9PQX1 116 aa8.97□□□□□ -0.97
DDX39A-201ENST00000242776 AMMECR1LQ6DCA0 310 aa8.97□□□□□ -0.97
DDX39A-201ENST00000242776 Q8N976 141 aa8.97□□□□□ -0.97
DDX39A-201ENST00000242776 CYSLTR1Q9Y271 337 aa8.97□□□□□ -0.97
DDX39A-201ENST00000242776 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.96□□□□□ -0.97
DDX39A-201ENST00000242776 A0A087WX48 190 aa8.96□□□□□ -0.97
DDX39A-201ENST00000242776 IGKV2-29A2NJV5 120 aaPredicted RBP8.96□□□□□ -0.97
DDX39A-201ENST00000242776 HSBP1O75506 76 aa8.96□□□□□ -0.97
DDX39A-201ENST00000242776 GAGE6Q13070 117 aa8.96□□□□□ -0.97
DDX39A-201ENST00000242776 C20orf203Q8NBC4 194 aa8.96□□□□□ -0.97
DDX39A-201ENST00000242776 ZNF25P17030 456 aaPredicted RBP8.96□□□□□ -0.98
DDX39A-201ENST00000242776 C2orf66Q6UXQ4 117 aa8.96□□□□□ -0.98
DDX39A-201ENST00000242776 URB1-AS1Q96HZ7 61 aa8.96□□□□□ -0.98
DDX39A-201ENST00000242776 TMEM101Q96IK0 257 aa8.96□□□□□ -0.98
DDX39A-201ENST00000242776 KLK12Q9UKR0 248 aa8.96□□□□□ -0.98
DDX39A-201ENST00000242776 SERF1AO75920 110 aa8.95□□□□□ -0.98
DDX39A-201ENST00000242776 HBDP02042 147 aa8.95□□□□□ -0.98
DDX39A-201ENST00000242776 FGF6P10767 208 aa8.95□□□□□ -0.98
DDX39A-201ENST00000242776 UBE2WQ96B02 151 aa8.95□□□□□ -0.98
DDX39A-201ENST00000242776 RMI2Q96E14 147 aa8.95□□□□□ -0.98
DDX39A-201ENST00000242776 A0A1B0GUV1 79 aa8.94□□□□□ -0.98
DDX39A-201ENST00000242776 RPL39P62891 51 aaKnown RBP8.94□□□□□ -0.98
DDX39A-201ENST00000242776 DGAT2L7PQ6IED9 249 aa8.94□□□□□ -0.98
DDX39A-201ENST00000242776 MRPL52Q86TS9 123 aaKnown RBP8.94□□□□□ -0.98
DDX39A-201ENST00000242776 SPANXA1Q9NS26 97 aa8.94□□□□□ -0.98
DDX39A-201ENST00000242776 COX11Q9Y6N1 276 aa8.94□□□□□ -0.98
DDX39A-201ENST00000242776 S100A6P06703 90 aa8.93□□□□□ -0.98
DDX39A-201ENST00000242776 MT1HL1P0DM35 61 aa8.93□□□□□ -0.98
DDX39A-201ENST00000242776 NDUFA6P56556 154 aa8.93□□□□□ -0.98
DDX39A-201ENST00000242776 MPV17L2Q567V2 206 aa8.93□□□□□ -0.98
DDX39A-201ENST00000242776 OR5A1Q8NGJ0 315 aa8.93□□□□□ -0.98
DDX39A-201ENST00000242776 TOMM6Q96B49 74 aa8.93□□□□□ -0.98
DDX39A-201ENST00000242776 TIMM21Q9BVV7 248 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms