RNA–Protein interactions for RNA: ENST00000005558.8

IFRD1-201, Transcript of interferon related developmental regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFRD1, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1-201ENST00000005558 CSMD3Q7Z407 3707 aa13.15□□□□□ -0.3
IFRD1-201ENST00000005558 LYPD5Q6UWN5 251 aa13.15□□□□□ -0.3
IFRD1-201ENST00000005558 Q6ZUT4 128 aa13.15□□□□□ -0.3
IFRD1-201ENST00000005558 RNASE13Q5GAN3 156 aaKnown RBP13.14□□□□□ -0.31
IFRD1-201ENST00000005558 Q6ZN92 141 aa13.14□□□□□ -0.31
IFRD1-201ENST00000005558 MRPL35Q9NZE8 188 aaKnown RBP13.14□□□□□ -0.31
IFRD1-201ENST00000005558 GAGE6Q13070 117 aa13.13□□□□□ -0.31
IFRD1-201ENST00000005558 TMEM97Q5BJF2 176 aa13.13□□□□□ -0.31
IFRD1-201ENST00000005558 CSDC2Q9Y534 153 aaKnown RBP13.13□□□□□ -0.31
IFRD1-201ENST00000005558 MRPS36P82909 103 aaKnown RBP13.13□□□□□ -0.31
IFRD1-201ENST00000005558 IGLV4-69A0A075B6H9 119 aa13.12□□□□□ -0.31
IFRD1-201ENST00000005558 H7C423 109 aa13.12□□□□□ -0.31
IFRD1-201ENST00000005558 NPSP0C0P6 89 aa13.12□□□□□ -0.31
IFRD1-201ENST00000005558 PMVKQ15126 192 aa13.12□□□□□ -0.31
IFRD1-201ENST00000005558 Q8N3U1 123 aa13.12□□□□□ -0.31
IFRD1-201ENST00000005558 IGLV4-60A0A075B6I1 120 aa13.11□□□□□ -0.31
IFRD1-201ENST00000005558 ESRGQ1W209 222 aa13.11□□□□□ -0.31
IFRD1-201ENST00000005558 SH2D6Q7Z4S9 175 aa13.11□□□□□ -0.31
IFRD1-201ENST00000005558 CDC42SE2Q9NRR3 84 aa13.11□□□□□ -0.31
IFRD1-201ENST00000005558 TIRAPP58753 221 aa13.11□□□□□ -0.31
IFRD1-201ENST00000005558 CHCHD5Q9BSY4 110 aa13.11□□□□□ -0.31
IFRD1-201ENST00000005558 LELP1Q5T871 98 aa13.09□□□□□ -0.31
IFRD1-201ENST00000005558 CHTOPQ9Y3Y2 248 aaKnown RBP13.09□□□□□ -0.31
IFRD1-201ENST00000005558 hDV102S1A0JD36 115 aa13.09□□□□□ -0.31
IFRD1-201ENST00000005558 F8VRH5 84 aa13.09□□□□□ -0.31
IFRD1-201ENST00000005558 MPV17L2Q567V2 206 aa13.09□□□□□ -0.31
IFRD1-201ENST00000005558 ZNF664Q8N3J9 261 aa13.09□□□□□ -0.31
IFRD1-201ENST00000005558 C20orf202A1L168 122 aa13.08□□□□□ -0.32
IFRD1-201ENST00000005558 VCX2Q9H322 139 aa13.08□□□□□ -0.32
IFRD1-201ENST00000005558 UBE2L6O14933 153 aa13.07□□□□□ -0.32
IFRD1-201ENST00000005558 RBX1P62877 108 aa13.06□□□□□ -0.32
IFRD1-201ENST00000005558 TRAV9-2A0A087WT02 112 aa13.06□□□□□ -0.32
IFRD1-201ENST00000005558 A0A1B0GUV1 79 aa13.06□□□□□ -0.32
IFRD1-201ENST00000005558 C11orf86A6NJI1 115 aa13.06□□□□□ -0.32
IFRD1-201ENST00000005558 STPG4Q8N801 248 aa13.06□□□□□ -0.32
IFRD1-201ENST00000005558 DPM2O94777 84 aa13.05□□□□□ -0.32
IFRD1-201ENST00000005558 IGKCP01834 107 aa13.05□□□□□ -0.32
IFRD1-201ENST00000005558 ZNF25P17030 456 aaPredicted RBP13.05□□□□□ -0.32
IFRD1-201ENST00000005558 CFAP161Q6P656 301 aa13.05□□□□□ -0.32
IFRD1-201ENST00000005558 OR5A1Q8NGJ0 315 aa13.05□□□□□ -0.32
IFRD1-201ENST00000005558 PLECQ15149 4684 aaKnown RBP13.05□□□□□ -0.32
IFRD1-201ENST00000005558 A0A0J9YXV3 536 aa13.04□□□□□ -0.32
IFRD1-201ENST00000005558 IGLL5B9A064 214 aa13.04□□□□□ -0.32
IFRD1-201ENST00000005558 UBE2D1P51668 147 aa13.04□□□□□ -0.32
IFRD1-201ENST00000005558 AMMECR1LQ6DCA0 310 aa13.04□□□□□ -0.32
IFRD1-201ENST00000005558 PAM16Q9Y3D7 125 aa13.04□□□□□ -0.32
IFRD1-201ENST00000005558 STARD9Q9P2P6 4700 aa13.04□□□□□ -0.32
IFRD1-201ENST00000005558 IGLC3P0DOY3 106 aa13.04□□□□□ -0.32
IFRD1-201ENST00000005558 DGAT2L7PQ6IED9 249 aa13.04□□□□□ -0.32
IFRD1-201ENST00000005558 NFE4Q86UQ8 179 aa13.04□□□□□ -0.32
IFRD1-201ENST00000005558 PAPPA-AS1Q5QFB9 102 aa13.03□□□□□ -0.32
IFRD1-201ENST00000005558 WFDC10BQ8IUB3 73 aa13.03□□□□□ -0.32
IFRD1-201ENST00000005558 C15orf53Q8NAA6 179 aa13.03□□□□□ -0.32
IFRD1-201ENST00000005558 TMEM262E9PQX1 116 aa13.02□□□□□ -0.32
IFRD1-201ENST00000005558 VAMP8Q9BV40 100 aa13.02□□□□□ -0.32
IFRD1-201ENST00000005558 FAM19A3Q7Z5A8 133 aa13.02□□□□□ -0.33
IFRD1-201ENST00000005558 PLNP26678 52 aa13.01□□□□□ -0.33
IFRD1-201ENST00000005558 COX6A2Q02221 97 aa13.01□□□□□ -0.33
IFRD1-201ENST00000005558 TMEM101Q96IK0 257 aa13.01□□□□□ -0.33
IFRD1-201ENST00000005558 APLNQ9ULZ1 77 aa13.01□□□□□ -0.33
IFRD1-201ENST00000005558 LYSTQ99698 3801 aa13□□□□□ -0.33
IFRD1-201ENST00000005558 SPATA45Q537H7 98 aa13□□□□□ -0.33
IFRD1-201ENST00000005558 LINC00242Q5T6M2 205 aa13□□□□□ -0.33
IFRD1-201ENST00000005558 PRO1933Q9H354 126 aa13□□□□□ -0.33
IFRD1-201ENST00000005558 LINC00588Q9Y4M8 146 aa13□□□□□ -0.33
IFRD1-201ENST00000005558 DNAH1Q9P2D7 4330 aa12.99□□□□□ -0.33
IFRD1-201ENST00000005558 IGKV2D-26A0A0A0MRZ7 120 aa12.99□□□□□ -0.33
IFRD1-201ENST00000005558 ZNF22P17026 224 aaPredicted RBP12.99□□□□□ -0.33
IFRD1-201ENST00000005558 TCTAP57738 103 aa12.99□□□□□ -0.33
IFRD1-201ENST00000005558 SMAGPQ0VAQ4 97 aa12.99□□□□□ -0.33
IFRD1-201ENST00000005558 TGP01266 2768 aa12.99□□□□□ -0.33
IFRD1-201ENST00000005558 CHAC1Q9BUX1 264 aa12.98□□□□□ -0.33
IFRD1-201ENST00000005558 TINCRA0A1B0GVN0 87 aa12.97□□□□□ -0.33
IFRD1-201ENST00000005558 TP73-AS1Q9UF72 201 aa12.97□□□□□ -0.33
IFRD1-201ENST00000005558 TRAV13-1A0A0B4J241 112 aa12.97□□□□□ -0.33
IFRD1-201ENST00000005558 C2orf88Q9BSF0 95 aa12.97□□□□□ -0.33
IFRD1-201ENST00000005558 IGLV5-45A0A087WSX0 123 aa12.96□□□□□ -0.33
IFRD1-201ENST00000005558 TRAV8-6A0A0B4J262 113 aa12.96□□□□□ -0.33
IFRD1-201ENST00000005558 LBHQ53QV2 105 aaPredicted RBP12.95□□□□□ -0.34
IFRD1-201ENST00000005558 LINC00269Q8N2A0 174 aa12.95□□□□□ -0.34
IFRD1-201ENST00000005558 LINC00959A0A1B0GUT2 108 aa12.95□□□□□ -0.34
IFRD1-201ENST00000005558 CLPSL2Q6UWE3 100 aa12.95□□□□□ -0.34
IFRD1-201ENST00000005558 MRPS16Q9Y3D3 137 aaKnown RBP12.95□□□□□ -0.34
IFRD1-201ENST00000005558 IGHV3-30P01768 117 aa12.94□□□□□ -0.34
IFRD1-201ENST00000005558 IGHV3-33P01772 117 aa12.94□□□□□ -0.34
IFRD1-201ENST00000005558 IGHV3-30-3P0DP02 117 aa12.94□□□□□ -0.34
IFRD1-201ENST00000005558 IGHV3-30-5P0DP03 117 aa12.94□□□□□ -0.34
IFRD1-201ENST00000005558 CDKN2A-AS1Q9UH64 79 aa12.94□□□□□ -0.34
IFRD1-201ENST00000005558 TENM2Q9NT68 2774 aa12.93□□□□□ -0.34
IFRD1-201ENST00000005558 IGKV3OR2-268A0A0C4DH90 116 aa12.93□□□□□ -0.34
IFRD1-201ENST00000005558 TMEM223A0PJW6 202 aa12.93□□□□□ -0.34
IFRD1-201ENST00000005558 PKIAP61925 76 aa12.93□□□□□ -0.34
IFRD1-201ENST00000005558 ENHOQ6UWT2 76 aa12.93□□□□□ -0.34
IFRD1-201ENST00000005558 C14orf144Q96I85 54 aa12.93□□□□□ -0.34
IFRD1-201ENST00000005558 PRR34Q9NV39 138 aa12.93□□□□□ -0.34
IFRD1-201ENST00000005558 A0A1B0GV90 55 aa12.92□□□□□ -0.34
IFRD1-201ENST00000005558 ANGP03950 147 aaKnown RBP12.92□□□□□ -0.34
IFRD1-201ENST00000005558 TTTY13Q9BZ97 58 aa12.92□□□□□ -0.34
IFRD1-201ENST00000005558 VPS13DQ5THJ4 4388 aa12.92□□□□□ -0.34
IFRD1-201ENST00000005558 TMEM170BQ5T4T1 132 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms