RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 UNC93B1Q9H1C4 597 aa12.47□□□□□ -0.41
PHGDH-222ENST00000641587 DOCK3Q8IZD9 2030 aa12.47□□□□□ -0.41
PHGDH-222ENST00000641587 DOCK1Q14185 1865 aa12.46□□□□□ -0.41
PHGDH-222ENST00000641587 RFX7Q2KHR2 1363 aa12.46□□□□□ -0.41
PHGDH-222ENST00000641587 PTPRCP08575 1304 aa12.46□□□□□ -0.41
PHGDH-222ENST00000641587 PHF20L1A8MW92 1017 aa12.46□□□□□ -0.41
PHGDH-222ENST00000641587 LDHBP07195 334 aaKnown RBP12.46□□□□□ -0.41
PHGDH-222ENST00000641587 ELNP15502 786 aa12.46□□□□□ -0.41
PHGDH-222ENST00000641587 ADORA1P30542 326 aa12.46□□□□□ -0.41
PHGDH-222ENST00000641587 RGS3P49796 1198 aa12.46□□□□□ -0.41
PHGDH-222ENST00000641587 ATP2B3Q16720 1220 aa12.46□□□□□ -0.41
PHGDH-222ENST00000641587 SH3BP5LQ7L8J4 393 aa12.46□□□□□ -0.41
PHGDH-222ENST00000641587 U2AF1L4Q8WU68 220 aaKnown RBP12.46□□□□□ -0.41
PHGDH-222ENST00000641587 ALPK3Q96L96 1907 aa12.46□□□□□ -0.42
PHGDH-222ENST00000641587 A0A0G2JLL6 359 aaPredicted RBP12.45□□□□□ -0.42
PHGDH-222ENST00000641587 FARP2O94887 1054 aaPredicted RBP12.45□□□□□ -0.42
PHGDH-222ENST00000641587 PTPRAP18433 802 aa12.45□□□□□ -0.42
PHGDH-222ENST00000641587 FCGRTP55899 365 aa12.45□□□□□ -0.42
PHGDH-222ENST00000641587 GADL1Q6ZQY3 521 aa12.45□□□□□ -0.42
PHGDH-222ENST00000641587 PRRT2Q7Z6L0 340 aaPredicted RBP12.45□□□□□ -0.42
PHGDH-222ENST00000641587 SCYL3Q8IZE3 742 aa12.45□□□□□ -0.42
PHGDH-222ENST00000641587 NKX2-3Q8TAU0 364 aa12.45□□□□□ -0.42
PHGDH-222ENST00000641587 PRO3102Q9H379 93 aa12.45□□□□□ -0.42
PHGDH-222ENST00000641587 DDX4Q9NQI0 724 aaKnown RBP12.45□□□□□ -0.42
PHGDH-222ENST00000641587 SMC4Q9NTJ3 1288 aa12.45□□□□□ -0.42
PHGDH-222ENST00000641587 PA2G4Q9UQ80 394 aaKnown RBP12.45□□□□□ -0.42
PHGDH-222ENST00000641587 SUPT16HQ9Y5B9 1047 aaKnown RBP12.45□□□□□ -0.42
PHGDH-222ENST00000641587 ZHX2Q9Y6X8 837 aa12.45□□□□□ -0.42
PHGDH-222ENST00000641587 DDTLA6NHG4 134 aaPredicted RBP12.44□□□□□ -0.42
PHGDH-222ENST00000641587 CXCL11O14625 94 aa12.44□□□□□ -0.42
PHGDH-222ENST00000641587 ADCY3O60266 1144 aa12.44□□□□□ -0.42
PHGDH-222ENST00000641587 INHAP05111 366 aa12.44□□□□□ -0.42
PHGDH-222ENST00000641587 FLT3LGP49771 235 aa12.44□□□□□ -0.42
PHGDH-222ENST00000641587 UBXN2AP68543 259 aa12.44□□□□□ -0.42
PHGDH-222ENST00000641587 SLAIN1Q8ND83 568 aa12.44□□□□□ -0.42
PHGDH-222ENST00000641587 HTATIP2Q9BUP3 242 aa12.44□□□□□ -0.42
PHGDH-222ENST00000641587 GAKO14976 1311 aa12.43□□□□□ -0.42
PHGDH-222ENST00000641587 SALL1Q9NSC2 1324 aa12.43□□□□□ -0.42
PHGDH-222ENST00000641587 TRIM75PA6NK02 468 aa12.43□□□□□ -0.42
PHGDH-222ENST00000641587 FAM196BA6NMK8 535 aa12.43□□□□□ -0.42
PHGDH-222ENST00000641587 RARSP54136 660 aaKnown RBP12.43□□□□□ -0.42
PHGDH-222ENST00000641587 PICALMQ13492 652 aa12.43□□□□□ -0.42
PHGDH-222ENST00000641587 ZSCAN29Q8IWY8 852 aaPredicted RBP12.43□□□□□ -0.42
PHGDH-222ENST00000641587 PICK1Q9NRD5 415 aa12.43□□□□□ -0.42
PHGDH-222ENST00000641587 CEP126Q9P2H0 1117 aa12.43□□□□□ -0.42
PHGDH-222ENST00000641587 TAOK2Q9UL54 1235 aa12.43□□□□□ -0.42
PHGDH-222ENST00000641587 AFG3L2Q9Y4W6 797 aa12.43□□□□□ -0.42
PHGDH-222ENST00000641587 SOX1O00570 391 aaPredicted RBP12.42□□□□□ -0.42
PHGDH-222ENST00000641587 TNPO2O14787 897 aaKnown RBP12.42□□□□□ -0.42
PHGDH-222ENST00000641587 ZBTB7BO15156 539 aaPredicted RBP12.42□□□□□ -0.42
PHGDH-222ENST00000641587 SGPL1O95470 568 aa12.42□□□□□ -0.42
PHGDH-222ENST00000641587 NEFLP07196 543 aa12.42□□□□□ -0.42
PHGDH-222ENST00000641587 RASGRF1Q13972 1273 aa12.42□□□□□ -0.42
PHGDH-222ENST00000641587 CCDC102BQ68D86 513 aa12.42□□□□□ -0.42
PHGDH-222ENST00000641587 IDI2Q9BXS1 227 aa12.42□□□□□ -0.42
PHGDH-222ENST00000641587 DENND2AQ9ULE3 1009 aa12.42□□□□□ -0.42
PHGDH-222ENST00000641587 ENTPD3O75355 529 aa12.41□□□□□ -0.42
PHGDH-222ENST00000641587 BCAR3O75815 825 aa12.41□□□□□ -0.42
PHGDH-222ENST00000641587 CIAO1O76071 339 aa12.41□□□□□ -0.42
PHGDH-222ENST00000641587 UBTFL1P0CB47 393 aaPredicted RBP12.41□□□□□ -0.42
PHGDH-222ENST00000641587 BTDP43251 543 aa12.41□□□□□ -0.42
PHGDH-222ENST00000641587 TREML2Q5T2D2 321 aa12.41□□□□□ -0.42
PHGDH-222ENST00000641587 FASTKD5Q7L8L6 764 aaKnown RBP12.41□□□□□ -0.42
PHGDH-222ENST00000641587 DZIP1Q86YF9 867 aaKnown RBP12.41□□□□□ -0.42
PHGDH-222ENST00000641587 ANKRD13CQ8N6S4 541 aa12.41□□□□□ -0.42
PHGDH-222ENST00000641587 SMCR8Q8TEV9 937 aaPredicted RBP12.41□□□□□ -0.42
PHGDH-222ENST00000641587 DIS3LQ8TF46 1054 aaKnown RBP12.41□□□□□ -0.42
PHGDH-222ENST00000641587 FRAT1Q92837 279 aaPredicted RBP12.41□□□□□ -0.42
PHGDH-222ENST00000641587 DEFB118Q96PH6 123 aa12.41□□□□□ -0.42
PHGDH-222ENST00000641587 GNL3LQ9NVN8 582 aaKnown RBP12.41□□□□□ -0.42
PHGDH-222ENST00000641587 ABCF2Q9UG63 623 aa12.41□□□□□ -0.42
PHGDH-222ENST00000641587 LRRFIP2Q9Y608 721 aaKnown RBP12.41□□□□□ -0.42
PHGDH-222ENST00000641587 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.41□□□□□ -0.42
PHGDH-222ENST00000641587 ATAD5Q96QE3 1844 aa12.41□□□□□ -0.42
PHGDH-222ENST00000641587 RRP1P56182 461 aaKnown RBP12.4□□□□□ -0.42
PHGDH-222ENST00000641587 TIMM10P62072 90 aa12.4□□□□□ -0.42
PHGDH-222ENST00000641587 ALDH1L2Q3SY69 923 aa12.4□□□□□ -0.42
PHGDH-222ENST00000641587 ZNF384Q8TF68 577 aa12.4□□□□□ -0.42
PHGDH-222ENST00000641587 LRCH3Q96II8 777 aa12.4□□□□□ -0.42
PHGDH-222ENST00000641587 NR2E3Q9Y5X4 410 aa12.4□□□□□ -0.42
PHGDH-222ENST00000641587 LOC285556D6RIA3 1793 aa12.4□□□□□ -0.42
PHGDH-222ENST00000641587 MROH7-TTC4A0A0A0MT08 1334 aa12.39□□□□□ -0.43
PHGDH-222ENST00000641587 SEMA3EO15041 775 aa12.39□□□□□ -0.43
PHGDH-222ENST00000641587 EVI5O60447 810 aa12.39□□□□□ -0.43
PHGDH-222ENST00000641587 TFRCP02786 760 aaKnown RBP12.39□□□□□ -0.43
PHGDH-222ENST00000641587 IL15P40933 162 aaPredicted RBP12.39□□□□□ -0.43
PHGDH-222ENST00000641587 RHBDL3P58872 404 aa12.39□□□□□ -0.43
PHGDH-222ENST00000641587 MAP3K10Q02779 954 aa12.39□□□□□ -0.43
PHGDH-222ENST00000641587 IRF5Q13568 498 aa12.39□□□□□ -0.43
PHGDH-222ENST00000641587 PAWRQ96IZ0 340 aaKnown RBP12.39□□□□□ -0.43
PHGDH-222ENST00000641587 MEIS3Q99687 375 aa12.39□□□□□ -0.43
PHGDH-222ENST00000641587 PAK6Q9NQU5 681 aaPredicted RBP12.39□□□□□ -0.43
PHGDH-222ENST00000641587 STAP2Q9UGK3 403 aa12.39□□□□□ -0.43
PHGDH-222ENST00000641587 FBXO3Q9UK99 471 aa12.39□□□□□ -0.43
PHGDH-222ENST00000641587 AGTPBP1Q9UPW5 1226 aa12.39□□□□□ -0.43
PHGDH-222ENST00000641587 SLC45A1Q9Y2W3 748 aa12.39□□□□□ -0.43
PHGDH-222ENST00000641587 CTNND1O60716 968 aaKnown RBP12.38□□□□□ -0.43
PHGDH-222ENST00000641587 MECOMQ03112 1051 aa12.38□□□□□ -0.43
PHGDH-222ENST00000641587 TRIM32Q13049 653 aa12.38□□□□□ -0.43
PHGDH-222ENST00000641587 RRP1BQ14684 758 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms