RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 IFNL3Q8IZI9 196 aa15.41■□□□□ 0.06
PHGDH-220ENST00000641570 ZC3H15Q8WU90 426 aaKnown RBP15.41■□□□□ 0.06
PHGDH-220ENST00000641570 TOMM22Q9NS69 142 aa15.41■□□□□ 0.06
PHGDH-220ENST00000641570 SAP30BPQ9UHR5 308 aaKnown RBP15.41■□□□□ 0.06
PHGDH-220ENST00000641570 PPP2R3BQ9Y5P8 575 aa15.41■□□□□ 0.06
PHGDH-220ENST00000641570 MYH7P12883 1935 aa15.41■□□□□ 0.06
PHGDH-220ENST00000641570 PRKAB2O43741 272 aa15.4■□□□□ 0.06
PHGDH-220ENST00000641570 RHBDL3P58872 404 aa15.4■□□□□ 0.06
PHGDH-220ENST00000641570 FKBP1CQ5VVH2 108 aa15.4■□□□□ 0.06
PHGDH-220ENST00000641570 IDI2Q9BXS1 227 aa15.4■□□□□ 0.06
PHGDH-220ENST00000641570 OSBPL5Q9H0X9 879 aaPredicted RBP15.4■□□□□ 0.06
PHGDH-220ENST00000641570 RNF41Q9H4P4 317 aaPredicted RBP15.4■□□□□ 0.06
PHGDH-220ENST00000641570 PCDHAC2Q9Y5I4 1007 aa15.4■□□□□ 0.06
PHGDH-220ENST00000641570 RBM8AQ9Y5S9 174 aaKnown RBP15.4■□□□□ 0.06
PHGDH-220ENST00000641570 PITPNM2Q9BZ72 1349 aa15.4■□□□□ 0.06
PHGDH-220ENST00000641570 MYH2Q9UKX2 1941 aa15.39■□□□□ 0.05
PHGDH-220ENST00000641570 PDE4BQ07343 736 aa15.39■□□□□ 0.05
PHGDH-220ENST00000641570 FAM83AQ86UY5 434 aa15.39■□□□□ 0.05
PHGDH-220ENST00000641570 LDHDQ86WU2 507 aa15.39■□□□□ 0.05
PHGDH-220ENST00000641570 CSRNP1Q96S65 589 aa15.39■□□□□ 0.05
PHGDH-220ENST00000641570 DCP1AQ9NPI6 582 aaPredicted RBP15.39■□□□□ 0.05
PHGDH-220ENST00000641570 ZMYM6O95789 1325 aa15.39■□□□□ 0.05
PHGDH-220ENST00000641570 GSG1L2A8MUP6 293 aa15.38■□□□□ 0.05
PHGDH-220ENST00000641570 NPM3O75607 178 aaKnown RBP15.38■□□□□ 0.05
PHGDH-220ENST00000641570 WDHD1O75717 1129 aaPredicted RBP15.38■□□□□ 0.05
PHGDH-220ENST00000641570 KRT32Q14532 448 aa15.38■□□□□ 0.05
PHGDH-220ENST00000641570 SLC4A8Q2Y0W8 1093 aa15.38■□□□□ 0.05
PHGDH-220ENST00000641570 VPS53Q5VIR6 699 aa15.38■□□□□ 0.05
PHGDH-220ENST00000641570 DCAF15Q66K64 600 aa15.38■□□□□ 0.05
PHGDH-220ENST00000641570 KRT26Q7Z3Y9 468 aa15.38■□□□□ 0.05
PHGDH-220ENST00000641570 RALYLQ86SE5 291 aaKnown RBP15.38■□□□□ 0.05
PHGDH-220ENST00000641570 FAM151AQ8WW52 585 aa15.38■□□□□ 0.05
PHGDH-220ENST00000641570 BACH2Q9BYV9 841 aa15.38■□□□□ 0.05
PHGDH-220ENST00000641570 LSG1Q9H089 658 aaKnown RBP15.38■□□□□ 0.05
PHGDH-220ENST00000641570 MKNK2Q9HBH9 465 aa15.38■□□□□ 0.05
PHGDH-220ENST00000641570 USP17L12C9JPN9 530 aa15.37■□□□□ 0.05
PHGDH-220ENST00000641570 USP17L21D6R901 530 aa15.37■□□□□ 0.05
PHGDH-220ENST00000641570 EGFRP00533 1210 aa15.37■□□□□ 0.05
PHGDH-220ENST00000641570 FGAP02671 866 aa15.37■□□□□ 0.05
PHGDH-220ENST00000641570 PPARAQ07869 468 aa15.37■□□□□ 0.05
PHGDH-220ENST00000641570 NFIAQ12857 509 aa15.37■□□□□ 0.05
PHGDH-220ENST00000641570 RASA3Q14644 834 aa15.37■□□□□ 0.05
PHGDH-220ENST00000641570 ALX1Q15699 326 aa15.37■□□□□ 0.05
PHGDH-220ENST00000641570 SUPT20HL1Q3ZLR7 823 aa15.37■□□□□ 0.05
PHGDH-220ENST00000641570 ZBED3Q96IU2 234 aaPredicted RBP15.37■□□□□ 0.05
PHGDH-220ENST00000641570 DEFB129Q9H1M3 183 aa15.37■□□□□ 0.05
PHGDH-220ENST00000641570 NMRK2Q9NPI5 230 aa15.37■□□□□ 0.05
PHGDH-220ENST00000641570 PI4KBQ9UBF8 816 aa15.37■□□□□ 0.05
PHGDH-220ENST00000641570 WDR90Q96KV7 1748 aa15.37■□□□□ 0.05
PHGDH-220ENST00000641570 UTRNP46939 3433 aa15.36■□□□□ 0.05
PHGDH-220ENST00000641570 HAND2P61296 217 aa15.36■□□□□ 0.05
PHGDH-220ENST00000641570 PTH1RQ03431 593 aa15.36■□□□□ 0.05
PHGDH-220ENST00000641570 TTLL12Q14166 644 aaPredicted RBP15.36■□□□□ 0.05
PHGDH-220ENST00000641570 MFSD6Q6ZSS7 791 aa15.36■□□□□ 0.05
PHGDH-220ENST00000641570 CDC37L1Q7L3B6 337 aa15.36■□□□□ 0.05
PHGDH-220ENST00000641570 MAP4K1Q92918 833 aa15.36■□□□□ 0.05
PHGDH-220ENST00000641570 C22orf23Q9BZE7 217 aa15.36■□□□□ 0.05
PHGDH-220ENST00000641570 CNNM2Q9H8M5 875 aa15.36■□□□□ 0.05
PHGDH-220ENST00000641570 SWAP70Q9UH65 585 aa15.36■□□□□ 0.05
PHGDH-220ENST00000641570 PALD1Q9ULE6 856 aa15.36■□□□□ 0.05
PHGDH-220ENST00000641570 SCN4AP35499 1836 aa15.36■□□□□ 0.05
PHGDH-220ENST00000641570 PCP11498 1178 aaKnown RBP15.35■□□□□ 0.05
PHGDH-220ENST00000641570 PSMA5P28066 241 aa15.35■□□□□ 0.05
PHGDH-220ENST00000641570 FGD1P98174 961 aa15.35■□□□□ 0.05
PHGDH-220ENST00000641570 RRP12Q5JTH9 1297 aaKnown RBP15.35■□□□□ 0.05
PHGDH-220ENST00000641570 CREB3L3Q68CJ9 461 aa15.35■□□□□ 0.05
PHGDH-220ENST00000641570 STK11IPQ8N1F8 1099 aa15.35■□□□□ 0.05
PHGDH-220ENST00000641570 TMEM39BQ9GZU3 492 aa15.35■□□□□ 0.05
PHGDH-220ENST00000641570 IL25Q9H293 177 aa15.35■□□□□ 0.05
PHGDH-220ENST00000641570 EPB41L4AQ9HCS5 686 aaPredicted RBP15.35■□□□□ 0.05
PHGDH-220ENST00000641570 DDX4Q9NQI0 724 aaKnown RBP15.35■□□□□ 0.05
PHGDH-220ENST00000641570 FAM198AQ9UFP1 575 aa15.35■□□□□ 0.05
PHGDH-220ENST00000641570 SERPINB13Q9UIV8 391 aa15.35■□□□□ 0.05
PHGDH-220ENST00000641570 TAOK2Q9UL54 1235 aa15.35■□□□□ 0.05
PHGDH-220ENST00000641570 HIRAP54198 1017 aaPredicted RBP15.34■□□□□ 0.05
PHGDH-220ENST00000641570 SBK1Q52WX2 424 aa15.34■□□□□ 0.05
PHGDH-220ENST00000641570 CTR9Q6PD62 1173 aa15.34■□□□□ 0.05
PHGDH-220ENST00000641570 ZNF444Q8N0Y2 327 aaPredicted RBP15.34■□□□□ 0.05
PHGDH-220ENST00000641570 USP26Q9BXU7 913 aa15.34■□□□□ 0.05
PHGDH-220ENST00000641570 KRT23Q9C075 422 aa15.34■□□□□ 0.05
PHGDH-220ENST00000641570 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.34■□□□□ 0.052e-7■■■■□ 19.6
PHGDH-220ENST00000641570 HERC5Q9UII4 1024 aaKnown RBP15.34■□□□□ 0.05
PHGDH-220ENST00000641570 ZNF646O15015 1829 aaPredicted RBP15.33■□□□□ 0.05
PHGDH-220ENST00000641570 MYO5AQ9Y4I1 1855 aaKnown RBP15.33■□□□□ 0.05
PHGDH-220ENST00000641570 ERICH2A1L162 156 aa15.33■□□□□ 0.04
PHGDH-220ENST00000641570 SLC27A2O14975 620 aa15.33■□□□□ 0.04
PHGDH-220ENST00000641570 PPP1R12BO60237 982 aaPredicted RBP15.33■□□□□ 0.04
PHGDH-220ENST00000641570 NT5C2P49902 561 aa15.33■□□□□ 0.04
PHGDH-220ENST00000641570 SART3Q15020 963 aaKnown RBP15.33■□□□□ 0.04
PHGDH-220ENST00000641570 C12orf60Q5U649 245 aa15.33■□□□□ 0.04
PHGDH-220ENST00000641570 USP48Q86UV5 1035 aa15.33■□□□□ 0.04
PHGDH-220ENST00000641570 FOXP4Q8IVH2 680 aaPredicted RBP15.33■□□□□ 0.04
PHGDH-220ENST00000641570 ZNF408Q9H9D4 720 aa15.33■□□□□ 0.04
PHGDH-220ENST00000641570 ASTN2O75129 1339 aaPredicted RBP15.33■□□□□ 0.04
PHGDH-220ENST00000641570 COL2A1P02458 1487 aaPredicted RBP15.33■□□□□ 0.04
PHGDH-220ENST00000641570 ADAMTSL1Q8N6G6 1762 aa15.32■□□□□ 0.04
PHGDH-220ENST00000641570 MPHOSPH10O00566 681 aaKnown RBP15.32■□□□□ 0.04
PHGDH-220ENST00000641570 HMGB1P09429 215 aaKnown RBP15.32■□□□□ 0.04
PHGDH-220ENST00000641570 HSPA4P34932 840 aa15.32■□□□□ 0.04
PHGDH-220ENST00000641570 ANAPC15P60006 121 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms