RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 SEC31BQ9NQW1 1179 aa16.79■□□□□ 0.28
SCARB2-221ENST00000640341 ERICH4A6NGS2 130 aa16.79■□□□□ 0.28
SCARB2-221ENST00000640341 MFSD6Q6ZSS7 791 aa16.79■□□□□ 0.28
SCARB2-221ENST00000640341 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.79■□□□□ 0.28
SCARB2-221ENST00000640341 LY9Q9HBG7 655 aa16.79■□□□□ 0.28
SCARB2-221ENST00000640341 LRP2BPQ9P2M1 347 aa16.79■□□□□ 0.28
SCARB2-221ENST00000640341 DDX41Q9UJV9 622 aaKnown RBP16.79■□□□□ 0.28
SCARB2-221ENST00000640341 MAP3K15Q6ZN16 1313 aa16.78■□□□□ 0.28
SCARB2-221ENST00000640341 SMIM22K7EJ46 135 aa16.78■□□□□ 0.28
SCARB2-221ENST00000640341 COBLO75128 1261 aa16.78■□□□□ 0.28
SCARB2-221ENST00000640341 CSF1RP07333 972 aa16.78■□□□□ 0.28
SCARB2-221ENST00000640341 STRBPQ96SI9 672 aaKnown RBP16.78■□□□□ 0.28
SCARB2-221ENST00000640341 SLC4A4Q9Y6R1 1079 aa16.78■□□□□ 0.28
SCARB2-221ENST00000640341 CASP1P29466 404 aa16.78■□□□□ 0.28
SCARB2-221ENST00000640341 AFMP43652 599 aa16.78■□□□□ 0.28
SCARB2-221ENST00000640341 STX17P56962 302 aa16.78■□□□□ 0.28
SCARB2-221ENST00000640341 IGDCC4Q8TDY8 1250 aa16.78■□□□□ 0.28
SCARB2-221ENST00000640341 EPB41L4AQ9HCS5 686 aaPredicted RBP16.78■□□□□ 0.28
SCARB2-221ENST00000640341 ERICH2A1L162 156 aa16.77■□□□□ 0.28
SCARB2-221ENST00000640341 BCAMP50895 628 aa16.77■□□□□ 0.28
SCARB2-221ENST00000640341 MAP3K12Q12852 859 aa16.77■□□□□ 0.28
SCARB2-221ENST00000640341 RASGRF1Q13972 1273 aa16.77■□□□□ 0.28
SCARB2-221ENST00000640341 SLC4A8Q2Y0W8 1093 aa16.77■□□□□ 0.28
SCARB2-221ENST00000640341 TRIM22Q8IYM9 498 aa16.77■□□□□ 0.28
SCARB2-221ENST00000640341 SPATA5Q8NB90 893 aa16.77■□□□□ 0.28
SCARB2-221ENST00000640341 ZSWIM4Q9H7M6 989 aa16.77■□□□□ 0.28
SCARB2-221ENST00000640341 PRR29P0C7W0 189 aa16.77■□□□□ 0.28
SCARB2-221ENST00000640341 PTPAQ15257 358 aa16.77■□□□□ 0.28
SCARB2-221ENST00000640341 USP49Q70CQ1 688 aa16.77■□□□□ 0.28
SCARB2-221ENST00000640341 DZIP3Q86Y13 1208 aaKnown RBP16.77■□□□□ 0.28
SCARB2-221ENST00000640341 KRI1Q8N9T8 703 aaKnown RBP16.77■□□□□ 0.28
SCARB2-221ENST00000640341 SDR42E1Q8WUS8 393 aa16.77■□□□□ 0.28
SCARB2-221ENST00000640341 CABP5Q9NP86 173 aa16.77■□□□□ 0.28
SCARB2-221ENST00000640341 SERTAD1Q9UHV2 236 aa16.77■□□□□ 0.28
SCARB2-221ENST00000640341 PRDM1O75626 825 aa16.77■□□□□ 0.27
SCARB2-221ENST00000640341 KRBA2Q6ZNG9 492 aa16.77■□□□□ 0.27
SCARB2-221ENST00000640341 STAMQ92783 540 aa16.77■□□□□ 0.27
SCARB2-221ENST00000640341 DESI2Q9BSY9 194 aa16.77■□□□□ 0.27
SCARB2-221ENST00000640341 NFE2L3Q9Y4A8 694 aa16.77■□□□□ 0.27
SCARB2-221ENST00000640341 GTPBP4Q9BZE4 634 aaKnown RBP16.76■□□□□ 0.27
SCARB2-221ENST00000640341 HSD3B7Q9H2F3 369 aa16.76■□□□□ 0.27
SCARB2-221ENST00000640341 PCDHB6Q9Y5E3 794 aa16.76■□□□□ 0.27
SCARB2-221ENST00000640341 CPDO75976 1380 aa16.76■□□□□ 0.27
SCARB2-221ENST00000640341 TRPM3Q9HCF6 1732 aaPredicted RBP16.76■□□□□ 0.27
SCARB2-221ENST00000640341 WTAPQ15007 396 aa16.76■□□□□ 0.27
SCARB2-221ENST00000640341 RTN1Q16799 776 aa16.76■□□□□ 0.27
SCARB2-221ENST00000640341 NOSTRINQ8IVI9 506 aa16.76■□□□□ 0.27
SCARB2-221ENST00000640341 LCORLQ8N3X6 602 aa16.76■□□□□ 0.27
SCARB2-221ENST00000640341 OXER1Q8TDS5 423 aa16.76■□□□□ 0.27
SCARB2-221ENST00000640341 UBXN4Q92575 508 aa16.76■□□□□ 0.27
SCARB2-221ENST00000640341 FAM217BQ9NTX9 383 aaPredicted RBP16.76■□□□□ 0.27
SCARB2-221ENST00000640341 KARSQ15046 597 aaKnown RBP16.76■□□□□ 0.27
SCARB2-221ENST00000640341 KRT222Q8N1A0 295 aa16.76■□□□□ 0.27
SCARB2-221ENST00000640341 CARD6Q9BX69 1037 aa16.76■□□□□ 0.27
SCARB2-221ENST00000640341 BMP6P22004 513 aa16.75■□□□□ 0.27
SCARB2-221ENST00000640341 UBE3CQ15386 1083 aa16.75■□□□□ 0.27
SCARB2-221ENST00000640341 TMEM87BQ96K49 555 aa16.75■□□□□ 0.27
SCARB2-221ENST00000640341 MAP3K14Q99558 947 aa16.75■□□□□ 0.27
SCARB2-221ENST00000640341 BTG4Q9NY30 223 aa16.75■□□□□ 0.27
SCARB2-221ENST00000640341 FAM205CA6NFA0 338 aa16.75■□□□□ 0.27
SCARB2-221ENST00000640341 KIF2AO00139 706 aaPredicted RBP16.75■□□□□ 0.27
SCARB2-221ENST00000640341 CBFA2T2O43439 604 aa16.75■□□□□ 0.27
SCARB2-221ENST00000640341 GNG11P61952 73 aa16.75■□□□□ 0.27
SCARB2-221ENST00000640341 SART3Q15020 963 aaKnown RBP16.75■□□□□ 0.27
SCARB2-221ENST00000640341 NTRK3Q16288 839 aa16.75■□□□□ 0.27
SCARB2-221ENST00000640341 FBXL16Q8N461 479 aa16.75■□□□□ 0.27
SCARB2-221ENST00000640341 DHX58Q96C10 678 aa16.75■□□□□ 0.27
SCARB2-221ENST00000640341 CARD10Q9BWT7 1032 aa16.75■□□□□ 0.27
SCARB2-221ENST00000640341 TACC3Q9Y6A5 838 aa16.75■□□□□ 0.27
SCARB2-221ENST00000640341 ETF1P62495 437 aaKnown RBP16.74■□□□□ 0.27
SCARB2-221ENST00000640341 PUM3Q15397 648 aaKnown RBP16.74■□□□□ 0.27
SCARB2-221ENST00000640341 RESP18Q5W5W9 173 aa16.74■□□□□ 0.27
SCARB2-221ENST00000640341 BPIFA3Q9BQP9 254 aa16.74■□□□□ 0.27
SCARB2-221ENST00000640341 UBAC1Q9BSL1 405 aa16.74■□□□□ 0.27
SCARB2-221ENST00000640341 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.74■□□□□ 0.27
SCARB2-221ENST00000640341 PATL2C9JE40 543 aaKnown RBP16.74■□□□□ 0.27
SCARB2-221ENST00000640341 PPP6R2O75170 966 aa16.74■□□□□ 0.27
SCARB2-221ENST00000640341 AKAP17AQ02040 695 aaKnown RBP16.74■□□□□ 0.27
SCARB2-221ENST00000640341 FMR1Q06787 632 aaKnown RBP eCLIP16.74■□□□□ 0.27
SCARB2-221ENST00000640341 SYCP1Q15431 976 aa16.74■□□□□ 0.27
SCARB2-221ENST00000640341 AKNAD1Q5T1N1 836 aa16.74■□□□□ 0.27
SCARB2-221ENST00000640341 SAMSN1Q9NSI8 373 aaKnown RBP16.74■□□□□ 0.27
SCARB2-221ENST00000640341 RIC1Q4ADV7 1423 aa16.74■□□□□ 0.27
SCARB2-221ENST00000640341 IKBKBO14920 756 aa16.74■□□□□ 0.27
SCARB2-221ENST00000640341 POSTNQ15063 836 aa16.74■□□□□ 0.27
SCARB2-221ENST00000640341 SMYD4Q8IYR2 804 aaPredicted RBP16.74■□□□□ 0.27
SCARB2-221ENST00000640341 VPS54Q9P1Q0 977 aa16.74■□□□□ 0.27
SCARB2-221ENST00000640341 PDE8AO60658 829 aa16.73■□□□□ 0.27
SCARB2-221ENST00000640341 CUTAO60888 179 aa16.73■□□□□ 0.27
SCARB2-221ENST00000640341 SLC5A1P13866 664 aa16.73■□□□□ 0.27
SCARB2-221ENST00000640341 LPIN2Q92539 896 aa16.73■□□□□ 0.27
SCARB2-221ENST00000640341 SMARCE1Q969G3 411 aa16.73■□□□□ 0.27
SCARB2-221ENST00000640341 TUBE1Q9UJT0 475 aa16.73■□□□□ 0.27
SCARB2-221ENST00000640341 HPSEQ9Y251 543 aa16.73■□□□□ 0.27
SCARB2-221ENST00000640341 CAMTA1Q9Y6Y1 1673 aa16.73■□□□□ 0.27
SCARB2-221ENST00000640341 CYP2D7A0A087X1C5 515 aa16.73■□□□□ 0.27
SCARB2-221ENST00000640341 UTP14CQ5TAP6 766 aaKnown RBP16.73■□□□□ 0.27
SCARB2-221ENST00000640341 SLC4A9Q96Q91 983 aa16.73■□□□□ 0.27
SCARB2-221ENST00000640341 NACAP1Q9BZK3 213 aa16.73■□□□□ 0.27
SCARB2-221ENST00000640341 RAI14Q9P0K7 980 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms