RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 CADPSQ9ULU8 1353 aa9.5□□□□□ -0.89
RFC1-217ENST00000639695 NCLP19338 710 aaKnown RBP9.5□□□□□ -0.89
RFC1-217ENST00000639695 CBLL1Q75N03 491 aa9.5□□□□□ -0.89
RFC1-217ENST00000639695 GATA6Q92908 595 aa9.5□□□□□ -0.89
RFC1-217ENST00000639695 PMEPA1Q969W9 287 aa9.5□□□□□ -0.89
RFC1-217ENST00000639695 OSBPL7Q9BZF2 842 aa9.5□□□□□ -0.89
RFC1-217ENST00000639695 BHLHE41Q9C0J9 482 aaPredicted RBP9.5□□□□□ -0.89
RFC1-217ENST00000639695 CYP4F12Q9HCS2 524 aa9.5□□□□□ -0.89
RFC1-217ENST00000639695 ANGEL1Q9UNK9 670 aaKnown RBP9.5□□□□□ -0.89
RFC1-217ENST00000639695 PRNPP04156 253 aa9.49□□□□□ -0.89
RFC1-217ENST00000639695 CTSBP07858 339 aa9.49□□□□□ -0.89
RFC1-217ENST00000639695 ST13P50502 369 aaKnown RBP9.49□□□□□ -0.89
RFC1-217ENST00000639695 RACK1P63244 317 aaKnown RBP9.49□□□□□ -0.89
RFC1-217ENST00000639695 LCE1DQ5T752 114 aa9.49□□□□□ -0.89
RFC1-217ENST00000639695 USPL1Q5W0Q7 1092 aa9.49□□□□□ -0.89
RFC1-217ENST00000639695 HIRIP3Q9BW71 556 aaPredicted RBP9.49□□□□□ -0.89
RFC1-217ENST00000639695 SOX17Q9H6I2 414 aaPredicted RBP9.49□□□□□ -0.89
RFC1-217ENST00000639695 PCDHGB7Q9Y5F8 929 aa9.49□□□□□ -0.89
RFC1-217ENST00000639695 FAM170BA6NMN3 283 aa9.48□□□□□ -0.89
RFC1-217ENST00000639695 GADD45BO75293 160 aaPredicted RBP9.48□□□□□ -0.89
RFC1-217ENST00000639695 GSTM4Q03013 218 aa9.48□□□□□ -0.89
RFC1-217ENST00000639695 FZD5Q13467 585 aa9.48□□□□□ -0.89
RFC1-217ENST00000639695 EXOSC6Q5RKV6 272 aaKnown RBP9.48□□□□□ -0.89
RFC1-217ENST00000639695 LNPKQ9C0E8 428 aa9.48□□□□□ -0.89
RFC1-217ENST00000639695 USP11P51784 963 aa9.47□□□□□ -0.89
RFC1-217ENST00000639695 SOX4Q06945 474 aaPredicted RBP9.47□□□□□ -0.89
RFC1-217ENST00000639695 OGFOD2Q6N063 350 aa9.47□□□□□ -0.89
RFC1-217ENST00000639695 PAOXQ6QHF9 649 aa9.47□□□□□ -0.89
RFC1-217ENST00000639695 PI16Q6UXB8 463 aa9.47□□□□□ -0.89
RFC1-217ENST00000639695 ZAR1Q86SH2 424 aa9.47□□□□□ -0.89
RFC1-217ENST00000639695 GIMAP7Q8NHV1 300 aa9.47□□□□□ -0.89
RFC1-217ENST00000639695 USP17L7P0C7H9 530 aa9.46□□□□□ -0.9
RFC1-217ENST00000639695 EDN3P14138 238 aa9.46□□□□□ -0.9
RFC1-217ENST00000639695 RBL2Q08999 1139 aa9.46□□□□□ -0.9
RFC1-217ENST00000639695 GIMAP6Q6P9H5 292 aa9.46□□□□□ -0.9
RFC1-217ENST00000639695 EZH1Q92800 747 aaPredicted RBP9.46□□□□□ -0.9
RFC1-217ENST00000639695 TBC1D32Q96NH3 1257 aa9.46□□□□□ -0.9
RFC1-217ENST00000639695 BCO2Q9BYV7 579 aa9.46□□□□□ -0.9
RFC1-217ENST00000639695 PPM1GO15355 546 aaPredicted RBP9.45□□□□□ -0.9
RFC1-217ENST00000639695 CYP26A1O43174 497 aa9.45□□□□□ -0.9
RFC1-217ENST00000639695 POLR3DP05423 398 aaPredicted RBP9.45□□□□□ -0.9
RFC1-217ENST00000639695 CPSF6Q16630 551 aaKnown RBP eCLIP9.45□□□□□ -0.9
RFC1-217ENST00000639695 MEI1Q5TIA1 1274 aa9.45□□□□□ -0.9
RFC1-217ENST00000639695 NXPE4Q6UWF7 544 aa9.45□□□□□ -0.9
RFC1-217ENST00000639695 VSIG10LQ86VR7 867 aa9.45□□□□□ -0.9
RFC1-217ENST00000639695 KRTAP4-7Q9BYR0 210 aa9.45□□□□□ -0.9
RFC1-217ENST00000639695 TMA7Q9Y2S6 64 aaKnown RBP9.45□□□□□ -0.9
RFC1-217ENST00000639695 ACTL7BQ9Y614 415 aa9.45□□□□□ -0.9
RFC1-217ENST00000639695 STK10O94804 968 aaKnown RBP9.44□□□□□ -0.9
RFC1-217ENST00000639695 ADH5P11766 374 aa9.44□□□□□ -0.9
RFC1-217ENST00000639695 ZNF423Q2M1K9 1284 aa9.44□□□□□ -0.9
RFC1-217ENST00000639695 CCDC144BQ3MJ40 725 aa9.44□□□□□ -0.9
RFC1-217ENST00000639695 TP53INP2Q8IXH6 220 aa9.44□□□□□ -0.9
RFC1-217ENST00000639695 GALNT12Q8IXK2 581 aa9.44□□□□□ -0.9
RFC1-217ENST00000639695 NPHS2Q9NP85 383 aa9.44□□□□□ -0.9
RFC1-217ENST00000639695 GSTT1P30711 240 aa9.43□□□□□ -0.9
RFC1-217ENST00000639695 PMFBP1Q8TBY8 1022 aa9.43□□□□□ -0.9
RFC1-217ENST00000639695 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.43□□□□□ -0.95e-11■■□□□ 14.1
RFC1-217ENST00000639695 METTL22Q9BUU2 404 aaPredicted RBP9.43□□□□□ -0.9
RFC1-217ENST00000639695 ECEL1O95672 775 aa9.42□□□□□ -0.9
RFC1-217ENST00000639695 NFICP08651 508 aa9.42□□□□□ -0.9
RFC1-217ENST00000639695 ITGB5P18084 799 aa9.42□□□□□ -0.9
RFC1-217ENST00000639695 GJA8P48165 433 aa9.42□□□□□ -0.9
RFC1-217ENST00000639695 JAG1P78504 1218 aa9.42□□□□□ -0.9
RFC1-217ENST00000639695 PWP1Q13610 501 aa9.42□□□□□ -0.9
RFC1-217ENST00000639695 SPRED3Q2MJR0 410 aa9.42□□□□□ -0.9
RFC1-217ENST00000639695 FBXL18Q96ME1 805 aa9.42□□□□□ -0.9
RFC1-217ENST00000639695 NOC4LQ9BVI4 516 aaKnown RBP9.42□□□□□ -0.9
RFC1-217ENST00000639695 PAK6Q9NQU5 681 aaPredicted RBP9.42□□□□□ -0.9
RFC1-217ENST00000639695 BSDC1Q9NW68 430 aaPredicted RBP9.42□□□□□ -0.9
RFC1-217ENST00000639695 ZC3H7BQ9UGR2 993 aaKnown RBP9.42□□□□□ -0.9
RFC1-217ENST00000639695 TRAK1Q9UPV9 953 aa9.42□□□□□ -0.9
RFC1-217ENST00000639695 RAB6AP20340 208 aa9.41□□□□□ -0.9
RFC1-217ENST00000639695 MAOBP27338 520 aa9.41□□□□□ -0.9
RFC1-217ENST00000639695 PAK2Q13177 524 aa9.41□□□□□ -0.9
RFC1-217ENST00000639695 ERMP1Q7Z2K6 904 aa9.41□□□□□ -0.9
RFC1-217ENST00000639695 GPRASP2Q96D09 838 aa9.41□□□□□ -0.9
RFC1-217ENST00000639695 ATF4P18848 351 aaPredicted RBP9.4□□□□□ -0.9
RFC1-217ENST00000639695 GRIA4P48058 902 aa9.4□□□□□ -0.9
RFC1-217ENST00000639695 PCDH1Q08174 1060 aa9.4□□□□□ -0.9
RFC1-217ENST00000639695 ZNF765Q7L2R6 523 aa9.4□□□□□ -0.9
RFC1-217ENST00000639695 MCF2L2Q86YR7 1114 aa9.4□□□□□ -0.9
RFC1-217ENST00000639695 RELL1Q8IUW5 271 aa9.4□□□□□ -0.9
RFC1-217ENST00000639695 FLCNQ8NFG4 579 aa9.4□□□□□ -0.9
RFC1-217ENST00000639695 SEMA6CQ9H3T2 930 aa9.4□□□□□ -0.9
RFC1-217ENST00000639695 ZSWIM4Q9H7M6 989 aa9.4□□□□□ -0.9
RFC1-217ENST00000639695 LRRC4CQ9HCJ2 640 aa9.4□□□□□ -0.9
RFC1-217ENST00000639695 FAM105AQ9NUU6 356 aa9.4□□□□□ -0.9
RFC1-217ENST00000639695 TTF2Q9UNY4 1162 aaKnown RBP9.4□□□□□ -0.9
RFC1-217ENST00000639695 TLDC2A0PJX2 215 aa9.39□□□□□ -0.91
RFC1-217ENST00000639695 DYNC1LI2O43237 492 aaPredicted RBP9.39□□□□□ -0.91
RFC1-217ENST00000639695 WFDC3Q8IUB2 231 aa9.39□□□□□ -0.91
RFC1-217ENST00000639695 TCF12Q99081 682 aa9.39□□□□□ -0.91
RFC1-217ENST00000639695 TRIM56Q9BRZ2 755 aaKnown RBP9.39□□□□□ -0.91
RFC1-217ENST00000639695 RSRP1Q9BUV0 290 aa9.39□□□□□ -0.91
RFC1-217ENST00000639695 EHD4Q9H223 541 aa9.39□□□□□ -0.91
RFC1-217ENST00000639695 A0A096LPE4 126 aa9.38□□□□□ -0.91
RFC1-217ENST00000639695 A0A1W2PP55 124 aa9.38□□□□□ -0.91
RFC1-217ENST00000639695 A0A1W2PPZ6 126 aa9.38□□□□□ -0.91
RFC1-217ENST00000639695 ANKRD62A6NC57 917 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms