RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 ZBTB48P10074 688 aaPredicted RBP16.94■□□□□ 0.3
SNRPA1-216ENST00000626000 PDE6AP16499 860 aa16.94■□□□□ 0.3
SNRPA1-216ENST00000626000 TCP10Q12799 353 aa16.94■□□□□ 0.3
SNRPA1-216ENST00000626000 NFIAQ12857 509 aa16.94■□□□□ 0.3
SNRPA1-216ENST00000626000 SLC10A4Q96EP9 437 aa16.94■□□□□ 0.3
SNRPA1-216ENST00000626000 CSRNP1Q96S65 589 aa16.94■□□□□ 0.3
SNRPA1-216ENST00000626000 ANTXR1Q9H6X2 564 aa16.94■□□□□ 0.3
SNRPA1-216ENST00000626000 TAOK2Q9UL54 1235 aa16.94■□□□□ 0.3
SNRPA1-216ENST00000626000 USP2O75604 605 aaPredicted RBP16.93■□□□□ 0.3
SNRPA1-216ENST00000626000 MAP3K9P80192 1104 aa16.93■□□□□ 0.3
SNRPA1-216ENST00000626000 GRM1Q13255 1194 aa16.93■□□□□ 0.3
SNRPA1-216ENST00000626000 UBE3CQ15386 1083 aa16.93■□□□□ 0.3
SNRPA1-216ENST00000626000 RASAL3Q86YV0 1011 aa16.93■□□□□ 0.3
SNRPA1-216ENST00000626000 FOCADQ5VW36 1801 aa16.93■□□□□ 0.3
SNRPA1-216ENST00000626000 MAGEB6P1A0A0J9YX57 407 aa16.92■□□□□ 0.3
SNRPA1-216ENST00000626000 FAM155AB1AL88 458 aaPredicted RBP16.92■□□□□ 0.3
SNRPA1-216ENST00000626000 TBC1D12O60347 775 aa16.92■□□□□ 0.3
SNRPA1-216ENST00000626000 INHBEP58166 350 aa16.92■□□□□ 0.3
SNRPA1-216ENST00000626000 SREBF2Q12772 1141 aa16.92■□□□□ 0.3
SNRPA1-216ENST00000626000 PICALMQ13492 652 aa16.92■□□□□ 0.3
SNRPA1-216ENST00000626000 PRKG1Q13976 671 aa16.92■□□□□ 0.3
SNRPA1-216ENST00000626000 CHD1LQ86WJ1 897 aa16.92■□□□□ 0.3
SNRPA1-216ENST00000626000 KBTBD3Q8NAB2 608 aa16.92■□□□□ 0.3
SNRPA1-216ENST00000626000 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.92■□□□□ 0.3
SNRPA1-216ENST00000626000 CRNKL1Q9BZJ0 848 aaKnown RBP16.92■□□□□ 0.3
SNRPA1-216ENST00000626000 OSBPL5Q9H0X9 879 aaPredicted RBP16.92■□□□□ 0.3
SNRPA1-216ENST00000626000 STAP2Q9UGK3 403 aa16.92■□□□□ 0.3
SNRPA1-216ENST00000626000 ADD2P35612 726 aa16.91■□□□□ 0.3
SNRPA1-216ENST00000626000 NUCB1Q02818 461 aa16.91■□□□□ 0.3
SNRPA1-216ENST00000626000 SH3RF3Q8TEJ3 882 aaPredicted RBP16.91■□□□□ 0.3
SNRPA1-216ENST00000626000 DDRGK1Q96HY6 314 aa16.91■□□□□ 0.3
SNRPA1-216ENST00000626000 WRNIP1Q96S55 665 aa16.91■□□□□ 0.3
SNRPA1-216ENST00000626000 PI4KBQ9UBF8 816 aa16.91■□□□□ 0.3
SNRPA1-216ENST00000626000 HERC5Q9UII4 1024 aaKnown RBP16.91■□□□□ 0.3
SNRPA1-216ENST00000626000 NDUFB9Q9Y6M9 179 aa16.91■□□□□ 0.3
SNRPA1-216ENST00000626000 ZNF532Q9HCE3 1301 aa16.91■□□□□ 0.3
SNRPA1-216ENST00000626000 MANSC4A6NHS7 340 aaPredicted RBP16.9■□□□□ 0.3
SNRPA1-216ENST00000626000 HLA-DOAP06340 250 aa16.9■□□□□ 0.3
SNRPA1-216ENST00000626000 NEFLP07196 543 aa16.9■□□□□ 0.3
SNRPA1-216ENST00000626000 USP5P45974 858 aa16.9■□□□□ 0.3
SNRPA1-216ENST00000626000 MAP3K10Q02779 954 aa16.9■□□□□ 0.3
SNRPA1-216ENST00000626000 MOB2Q70IA6 237 aa16.9■□□□□ 0.3
SNRPA1-216ENST00000626000 ADGRA1Q86SQ6 560 aa16.9■□□□□ 0.3
SNRPA1-216ENST00000626000 WBP1LQ9NX94 342 aa16.9■□□□□ 0.3
SNRPA1-216ENST00000626000 SALL3Q9BXA9 1300 aa16.9■□□□□ 0.3
SNRPA1-216ENST00000626000 LAMB1P07942 1786 aa16.89■□□□□ 0.3
SNRPA1-216ENST00000626000 OTOFQ9HC10 1997 aa16.89■□□□□ 0.3
SNRPA1-216ENST00000626000 PDE1AP54750 535 aa16.89■□□□□ 0.29
SNRPA1-216ENST00000626000 SPRYD7Q5W111 196 aa16.89■□□□□ 0.29
SNRPA1-216ENST00000626000 FOXP4Q8IVH2 680 aaPredicted RBP16.89■□□□□ 0.29
SNRPA1-216ENST00000626000 PI4K2BQ8TCG2 481 aa16.89■□□□□ 0.29
SNRPA1-216ENST00000626000 TGFBRAP1Q8WUH2 860 aa16.89■□□□□ 0.29
SNRPA1-216ENST00000626000 RIOK1Q9BRS2 568 aaKnown RBP16.89■□□□□ 0.29
SNRPA1-216ENST00000626000 TRIM34Q9BYJ4 488 aa16.89■□□□□ 0.29
SNRPA1-216ENST00000626000 LNPKQ9C0E8 428 aa16.89■□□□□ 0.29
SNRPA1-216ENST00000626000 DDX4Q9NQI0 724 aaKnown RBP16.89■□□□□ 0.29
SNRPA1-216ENST00000626000 SAGE1Q9NXZ1 904 aa16.89■□□□□ 0.29
SNRPA1-216ENST00000626000 ZNF112Q9UJU3 913 aa16.89■□□□□ 0.29
SNRPA1-216ENST00000626000 FLT1P17948 1338 aa16.89■□□□□ 0.29
SNRPA1-216ENST00000626000 CDK5RAP2Q96SN8 1893 aa16.88■□□□□ 0.29
SNRPA1-216ENST00000626000 TCRBV5S4A2TA0A5A2 114 aa16.88■□□□□ 0.29
SNRPA1-216ENST00000626000 IGHDP01880 384 aa16.88■□□□□ 0.29
SNRPA1-216ENST00000626000 HSPA1AP0DMV8 641 aaKnown RBP16.88■□□□□ 0.29
SNRPA1-216ENST00000626000 HSPA1BP0DMV9 641 aaKnown RBP16.88■□□□□ 0.29
SNRPA1-216ENST00000626000 IRX6P78412 446 aaPredicted RBP16.88■□□□□ 0.29
SNRPA1-216ENST00000626000 KIF23Q02241 960 aaPredicted RBP16.88■□□□□ 0.29
SNRPA1-216ENST00000626000 VGLL4Q14135 290 aa16.88■□□□□ 0.29
SNRPA1-216ENST00000626000 NOL9Q5SY16 702 aaKnown RBP16.88■□□□□ 0.29
SNRPA1-216ENST00000626000 TTC6Q86TZ1 520 aa16.88■□□□□ 0.29
SNRPA1-216ENST00000626000 ERO1BQ86YB8 467 aa16.88■□□□□ 0.29
SNRPA1-216ENST00000626000 AMOTL1Q8IY63 956 aa16.88■□□□□ 0.29
SNRPA1-216ENST00000626000 MIGA1Q8NAN2 632 aa16.88■□□□□ 0.29
SNRPA1-216ENST00000626000 EVI5LQ96CN4 794 aa16.88■□□□□ 0.29
SNRPA1-216ENST00000626000 WNK4Q96J92 1243 aa16.88■□□□□ 0.29
SNRPA1-216ENST00000626000 ATP8A2Q9NTI2 1148 aa16.88■□□□□ 0.29
SNRPA1-216ENST00000626000 SPDYE5A6NIY4 337 aa16.87■□□□□ 0.29
SNRPA1-216ENST00000626000 AOC2O75106 756 aa16.87■□□□□ 0.29
SNRPA1-216ENST00000626000 ALDH1A1P00352 501 aa16.87■□□□□ 0.29
SNRPA1-216ENST00000626000 CTCFP49711 727 aaPredicted RBP16.87■□□□□ 0.29
SNRPA1-216ENST00000626000 OTUD7BQ6GQQ9 843 aa16.87■□□□□ 0.29
SNRPA1-216ENST00000626000 B4GALNT3Q6L9W6 998 aa16.87■□□□□ 0.29
SNRPA1-216ENST00000626000 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.87■□□□□ 0.29
SNRPA1-216ENST00000626000 CDAN1Q8IWY9 1227 aa16.87■□□□□ 0.29
SNRPA1-216ENST00000626000 APPBP2Q92624 585 aa16.87■□□□□ 0.29
SNRPA1-216ENST00000626000 EDC3Q96F86 508 aaKnown RBP16.87■□□□□ 0.29
SNRPA1-216ENST00000626000 TBC1D2Q9BYX2 928 aa16.87■□□□□ 0.29
SNRPA1-216ENST00000626000 OSBPL3Q9H4L5 887 aa16.87■□□□□ 0.29
SNRPA1-216ENST00000626000 PICK1Q9NRD5 415 aa16.87■□□□□ 0.29
SNRPA1-216ENST00000626000 GINM1Q9NU53 330 aa16.87■□□□□ 0.29
SNRPA1-216ENST00000626000 DDTLA6NHG4 134 aaPredicted RBP16.86■□□□□ 0.29
SNRPA1-216ENST00000626000 RNF113AO15541 343 aaKnown RBP16.86■□□□□ 0.29
SNRPA1-216ENST00000626000 CTNND1O60716 968 aaKnown RBP16.86■□□□□ 0.29
SNRPA1-216ENST00000626000 GNAT2P19087 354 aa16.86■□□□□ 0.29
SNRPA1-216ENST00000626000 PPATQ06203 517 aa16.86■□□□□ 0.29
SNRPA1-216ENST00000626000 MIGA2Q7L4E1 593 aa16.86■□□□□ 0.29
SNRPA1-216ENST00000626000 MAPKAPK5Q8IW41 473 aa16.86■□□□□ 0.29
SNRPA1-216ENST00000626000 CRACR2BQ8N4Y2 399 aaPredicted RBP16.86■□□□□ 0.29
SNRPA1-216ENST00000626000 FSD1Q9BTV5 496 aa16.86■□□□□ 0.29
SNRPA1-216ENST00000626000 EHD4Q9H223 541 aa16.86■□□□□ 0.29
SNRPA1-216ENST00000626000 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms