RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 CHD4Q14839 1912 aa23.03■■□□□ 1.28
TREX1-205ENST00000625293 NRXN2Q9P2S2 1712 aa23.03■■□□□ 1.28
TREX1-205ENST00000625293 KIF13BQ9NQT8 1826 aa23.03■■□□□ 1.28
TREX1-205ENST00000625293 KDM4AO75164 1064 aa23.03■■□□□ 1.28
TREX1-205ENST00000625293 PRDX5P30044 214 aa23.03■■□□□ 1.28
TREX1-205ENST00000625293 CHAF1AQ13111 956 aaPredicted RBP23.03■■□□□ 1.28
TREX1-205ENST00000625293 APOA5Q6Q788 366 aa23.03■■□□□ 1.28
TREX1-205ENST00000625293 SYCE3A1L190 88 aa23.02■■□□□ 1.28
TREX1-205ENST00000625293 CRAMP1Q96RY5 1269 aa23.02■■□□□ 1.28
TREX1-205ENST00000625293 SCAND2PQ9GZW5 306 aaPredicted RBP23.02■■□□□ 1.28
TREX1-205ENST00000625293 RNF41Q9H4P4 317 aaPredicted RBP23.02■■□□□ 1.28
TREX1-205ENST00000625293 KIAA1551Q9HCM1 1747 aa23.02■■□□□ 1.28
TREX1-205ENST00000625293 NID2Q14112 1375 aa23.02■■□□□ 1.28
TREX1-205ENST00000625293 BBOX1O75936 387 aa23.01■■□□□ 1.27
TREX1-205ENST00000625293 TMEM67Q5HYA8 995 aa23.01■■□□□ 1.27
TREX1-205ENST00000625293 ADD1P35611 737 aaKnown RBP23.01■■□□□ 1.27
TREX1-205ENST00000625293 RAB11FIP4Q86YS3 637 aa23.01■■□□□ 1.27
TREX1-205ENST00000625293 RGS22Q8NE09 1264 aa23.01■■□□□ 1.27
TREX1-205ENST00000625293 PODXL2Q9NZ53 605 aa23.01■■□□□ 1.27
TREX1-205ENST00000625293 ATP2B4P23634 1241 aa23■■□□□ 1.27
TREX1-205ENST00000625293 METAP2P50579 478 aaKnown RBP eCLIP23■■□□□ 1.27
TREX1-205ENST00000625293 SPTY2D1Q68D10 685 aaPredicted RBP23■■□□□ 1.27
TREX1-205ENST00000625293 WDR66Q8TBY9 1149 aa23■■□□□ 1.27
TREX1-205ENST00000625293 LEO1Q8WVC0 666 aaPredicted RBP23■■□□□ 1.27
TREX1-205ENST00000625293 LRRC37AA6NMS7 1700 aa22.99■■□□□ 1.27
TREX1-205ENST00000625293 PPFIA3O75145 1194 aa22.99■■□□□ 1.27
TREX1-205ENST00000625293 FGRP09769 529 aa22.99■■□□□ 1.27
TREX1-205ENST00000625293 CCDC183Q5T5S1 534 aa22.99■■□□□ 1.27
TREX1-205ENST00000625293 ZNF804AQ7Z570 1209 aa22.99■■□□□ 1.27
TREX1-205ENST00000625293 IFIT3O14879 490 aaKnown RBP22.99■■□□□ 1.27
TREX1-205ENST00000625293 FAM217BQ9NTX9 383 aaPredicted RBP22.99■■□□□ 1.27
TREX1-205ENST00000625293 ORC3Q9UBD5 711 aaPredicted RBP22.99■■□□□ 1.27
TREX1-205ENST00000625293 LTBP1Q14766 1721 aa22.98■■□□□ 1.27
TREX1-205ENST00000625293 CPLX1O14810 134 aa22.98■■□□□ 1.27
TREX1-205ENST00000625293 ZBTB43O43298 467 aa22.98■■□□□ 1.27
TREX1-205ENST00000625293 CDC27P30260 824 aa22.98■■□□□ 1.27
TREX1-205ENST00000625293 C2CD5Q86YS7 1000 aa22.98■■□□□ 1.27
TREX1-205ENST00000625293 GPR101Q96P66 508 aaPredicted RBP22.98■■□□□ 1.27
TREX1-205ENST00000625293 TFIP11Q9UBB9 837 aaKnown RBP22.98■■□□□ 1.27
TREX1-205ENST00000625293 BCS1LQ9Y276 419 aa22.98■■□□□ 1.27
TREX1-205ENST00000625293 DUOX1Q9NRD9 1551 aa22.97■■□□□ 1.27
TREX1-205ENST00000625293 ANKRD31Q8N7Z5 1873 aa22.97■■□□□ 1.27
TREX1-205ENST00000625293 SMIM22K7EJ46 135 aa22.97■■□□□ 1.27
TREX1-205ENST00000625293 UFL1O94874 794 aa22.97■■□□□ 1.27
TREX1-205ENST00000625293 FOSBP53539 338 aa22.97■■□□□ 1.27
TREX1-205ENST00000625293 NTRK3Q16288 839 aa22.97■■□□□ 1.27
TREX1-205ENST00000625293 CTR9Q6PD62 1173 aa22.97■■□□□ 1.27
TREX1-205ENST00000625293 SPATA32Q96LK8 384 aa22.97■■□□□ 1.27
TREX1-205ENST00000625293 RBSNQ9H1K0 784 aa22.97■■□□□ 1.27
TREX1-205ENST00000625293 GGA1Q9UJY5 639 aa22.97■■□□□ 1.27
TREX1-205ENST00000625293 JAG2Q9Y219 1238 aa22.97■■□□□ 1.27
TREX1-205ENST00000625293 DCAF8L1A6NGE4 600 aa22.96■■□□□ 1.27
TREX1-205ENST00000625293 MINDY4BA8MYZ0 360 aa22.96■■□□□ 1.27
TREX1-205ENST00000625293 TMC4Q7Z404 712 aa22.96■■□□□ 1.27
TREX1-205ENST00000625293 CRNKL1Q9BZJ0 848 aaKnown RBP22.96■■□□□ 1.27
TREX1-205ENST00000625293 AATFQ9NY61 560 aaKnown RBP eCLIP22.96■■□□□ 1.27
TREX1-205ENST00000625293 PCP11498 1178 aaKnown RBP22.96■■□□□ 1.27
TREX1-205ENST00000625293 IL1R1P14778 569 aa22.96■■□□□ 1.27
TREX1-205ENST00000625293 RRP12Q5JTH9 1297 aaKnown RBP22.96■■□□□ 1.27
TREX1-205ENST00000625293 ATL3Q6DD88 541 aa22.96■■□□□ 1.27
TREX1-205ENST00000625293 NFXL1Q6ZNB6 911 aa22.96■■□□□ 1.27
TREX1-205ENST00000625293 MICU3Q86XE3 530 aa22.96■■□□□ 1.27
TREX1-205ENST00000625293 FBXO18Q8NFZ0 1043 aa22.96■■□□□ 1.27
TREX1-205ENST00000625293 DCP1AQ9NPI6 582 aaPredicted RBP22.96■■□□□ 1.27
TREX1-205ENST00000625293 CDKL5O76039 1030 aa22.95■■□□□ 1.26
TREX1-205ENST00000625293 RXRAP19793 462 aa22.95■■□□□ 1.26
TREX1-205ENST00000625293 RCAN1P53805 252 aa22.95■■□□□ 1.26
TREX1-205ENST00000625293 GUCY1B3Q02153 619 aa22.95■■□□□ 1.26
TREX1-205ENST00000625293 DZIP1Q86YF9 867 aaKnown RBP22.95■■□□□ 1.26
TREX1-205ENST00000625293 C8orf76Q96K31 380 aa22.95■■□□□ 1.26
TREX1-205ENST00000625293 CD209Q9NNX6 404 aa22.95■■□□□ 1.26
TREX1-205ENST00000625293 ATP8A2Q9NTI2 1148 aa22.95■■□□□ 1.26
TREX1-205ENST00000625293 CFAP45Q9UL16 551 aa22.95■■□□□ 1.26
TREX1-205ENST00000625293 SLC12A7Q9Y666 1083 aa22.95■■□□□ 1.26
TREX1-205ENST00000625293 CCDC88AQ3V6T2 1871 aa22.95■■□□□ 1.26
TREX1-205ENST00000625293 CYP2D7A0A087X1C5 515 aa22.94■■□□□ 1.26
TREX1-205ENST00000625293 CCDC69A6NI79 296 aa22.94■■□□□ 1.26
TREX1-205ENST00000625293 GOLGA8AA7E2F4 631 aa22.94■■□□□ 1.26
TREX1-205ENST00000625293 LDHBP07195 334 aaKnown RBP22.94■■□□□ 1.26
TREX1-205ENST00000625293 NASPP49321 788 aaPredicted RBP22.94■■□□□ 1.26
TREX1-205ENST00000625293 SART3Q15020 963 aaKnown RBP22.94■■□□□ 1.26
TREX1-205ENST00000625293 SEC23AQ15436 765 aa22.94■■□□□ 1.26
TREX1-205ENST00000625293 TBC1D16Q8TBP0 767 aa22.94■■□□□ 1.26
TREX1-205ENST00000625293 ESR2Q92731 530 aa22.94■■□□□ 1.26
TREX1-205ENST00000625293 PIM2Q9P1W9 311 aa22.94■■□□□ 1.26
TREX1-205ENST00000625293 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.94■■□□□ 1.26
TREX1-205ENST00000625293 MYH15Q9Y2K3 1946 aa22.94■■□□□ 1.26
TREX1-205ENST00000625293 H0YIN7 160 aa22.94■■□□□ 1.26
TREX1-205ENST00000625293 LETM1O95202 739 aaPredicted RBP22.94■■□□□ 1.26
TREX1-205ENST00000625293 WTAPQ15007 396 aa22.94■■□□□ 1.26
TREX1-205ENST00000625293 GRIK5Q16478 980 aa22.94■■□□□ 1.26
TREX1-205ENST00000625293 SBK1Q52WX2 424 aa22.94■■□□□ 1.26
TREX1-205ENST00000625293 ZNF622Q969S3 477 aaKnown RBP eCLIP22.94■■□□□ 1.26
TREX1-205ENST00000625293 TOMM22Q9NS69 142 aa22.94■■□□□ 1.26
TREX1-205ENST00000625293 POLLQ9UGP5 575 aa22.94■■□□□ 1.26
TREX1-205ENST00000625293 USP17L12C9JPN9 530 aa22.93■■□□□ 1.26
TREX1-205ENST00000625293 USP17L21D6R901 530 aa22.93■■□□□ 1.26
TREX1-205ENST00000625293 RANBP6O60518 1105 aaKnown RBP22.93■■□□□ 1.26
TREX1-205ENST00000625293 PDE6BP35913 854 aa22.93■■□□□ 1.26
TREX1-205ENST00000625293 OTUD7BQ6GQQ9 843 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms