RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 KRT23Q9C075 422 aa16.84■□□□□ 0.29
CLTCL1-212ENST00000622493 BAZ2AQ9UIF9 1905 aaKnown RBP16.83■□□□□ 0.28
CLTCL1-212ENST00000622493 MINDY4BA8MYZ0 360 aa16.83■□□□□ 0.28
CLTCL1-212ENST00000622493 FZD9O00144 591 aa16.83■□□□□ 0.28
CLTCL1-212ENST00000622493 NT5C2P49902 561 aa16.83■□□□□ 0.28
CLTCL1-212ENST00000622493 RASSF7Q02833 373 aa16.83■□□□□ 0.28
CLTCL1-212ENST00000622493 TBC1D10CQ8IV04 446 aa16.83■□□□□ 0.28
CLTCL1-212ENST00000622493 TGFBRAP1Q8WUH2 860 aa16.83■□□□□ 0.28
CLTCL1-212ENST00000622493 MCM9Q9NXL9 1143 aa16.83■□□□□ 0.28
CLTCL1-212ENST00000622493 LIMCH1Q9UPQ0 1083 aa16.83■□□□□ 0.28
CLTCL1-212ENST00000622493 SLC3A2P08195 630 aaKnown RBP16.82■□□□□ 0.28
CLTCL1-212ENST00000622493 MCM5P33992 734 aa16.82■□□□□ 0.28
CLTCL1-212ENST00000622493 ARHGAP27Q6ZUM4 889 aa16.82■□□□□ 0.28
CLTCL1-212ENST00000622493 MB21D2Q8IYB1 491 aaPredicted RBP16.82■□□□□ 0.28
CLTCL1-212ENST00000622493 FOCADQ5VW36 1801 aa16.82■□□□□ 0.28
CLTCL1-212ENST00000622493 CDK5RAP2Q96SN8 1893 aa16.82■□□□□ 0.28
CLTCL1-212ENST00000622493 FGRP09769 529 aa16.82■□□□□ 0.28
CLTCL1-212ENST00000622493 LMNB1P20700 586 aa16.82■□□□□ 0.28
CLTCL1-212ENST00000622493 RPS12P25398 132 aaKnown RBP16.82■□□□□ 0.28
CLTCL1-212ENST00000622493 RBM5P52756 815 aaKnown RBP eCLIP16.82■□□□□ 0.28
CLTCL1-212ENST00000622493 EIF6P56537 245 aaKnown RBP16.82■□□□□ 0.28
CLTCL1-212ENST00000622493 CTDSPL2Q05D32 466 aa16.82■□□□□ 0.28
CLTCL1-212ENST00000622493 CDC42EP5Q6NZY7 148 aa16.82■□□□□ 0.28
CLTCL1-212ENST00000622493 TMX3Q96JJ7 454 aa16.82■□□□□ 0.28
CLTCL1-212ENST00000622493 ZSCAN31Q96LW9 406 aaPredicted RBP16.82■□□□□ 0.28
CLTCL1-212ENST00000622493 AGXT2Q9BYV1 514 aa16.82■□□□□ 0.28
CLTCL1-212ENST00000622493 USP40Q9NVE5 1235 aa16.82■□□□□ 0.28
CLTCL1-212ENST00000622493 FLT1P17948 1338 aa16.81■□□□□ 0.28
CLTCL1-212ENST00000622493 LAMB1P07942 1786 aa16.81■□□□□ 0.28
CLTCL1-212ENST00000622493 USP17L8P0C7I0 530 aa16.81■□□□□ 0.28
CLTCL1-212ENST00000622493 C12orf60Q5U649 245 aa16.81■□□□□ 0.28
CLTCL1-212ENST00000622493 NAV1Q8NEY1 1877 aa16.8■□□□□ 0.28
CLTCL1-212ENST00000622493 NPM3O75607 178 aaKnown RBP16.8■□□□□ 0.28
CLTCL1-212ENST00000622493 HSP90AA1P07900 732 aaKnown RBP16.8■□□□□ 0.28
CLTCL1-212ENST00000622493 PRELPP51888 382 aa16.8■□□□□ 0.28
CLTCL1-212ENST00000622493 FGD1P98174 961 aa16.8■□□□□ 0.28
CLTCL1-212ENST00000622493 COL9A3Q14050 684 aaPredicted RBP16.8■□□□□ 0.28
CLTCL1-212ENST00000622493 CFAP100Q494V2 611 aa16.8■□□□□ 0.28
CLTCL1-212ENST00000622493 Q6ZUG5 572 aa16.8■□□□□ 0.28
CLTCL1-212ENST00000622493 MAPKAPK5Q8IW41 473 aa16.8■□□□□ 0.28
CLTCL1-212ENST00000622493 MTA3Q9BTC8 594 aa16.8■□□□□ 0.28
CLTCL1-212ENST00000622493 SH2B1Q9NRF2 756 aaPredicted RBP16.8■□□□□ 0.28
CLTCL1-212ENST00000622493 ZBTB12Q9Y330 459 aaPredicted RBP16.8■□□□□ 0.28
CLTCL1-212ENST00000622493 WDHD1O75717 1129 aaPredicted RBP16.79■□□□□ 0.28
CLTCL1-212ENST00000622493 TOB2Q14106 344 aaPredicted RBP16.79■□□□□ 0.28
CLTCL1-212ENST00000622493 MTMR14Q8NCE2 650 aa16.79■□□□□ 0.28
CLTCL1-212ENST00000622493 TCEANC2Q96MN5 208 aa16.79■□□□□ 0.28
CLTCL1-212ENST00000622493 IDI2Q9BXS1 227 aa16.79■□□□□ 0.28
CLTCL1-212ENST00000622493 ECM29Q5VYK3 1845 aa16.79■□□□□ 0.28
CLTCL1-212ENST00000622493 NEDD4P46934 1319 aa16.79■□□□□ 0.28
CLTCL1-212ENST00000622493 ROBO3Q96MS0 1386 aa16.79■□□□□ 0.28
CLTCL1-212ENST00000622493 DICER1Q9UPY3 1922 aaKnown RBP16.79■□□□□ 0.28
CLTCL1-212ENST00000622493 SOCS7O14512 581 aa16.79■□□□□ 0.28
CLTCL1-212ENST00000622493 POLR3DP05423 398 aaPredicted RBP16.79■□□□□ 0.28
CLTCL1-212ENST00000622493 PDE4BQ07343 736 aa16.79■□□□□ 0.28
CLTCL1-212ENST00000622493 CUL4AQ13619 759 aa16.79■□□□□ 0.28
CLTCL1-212ENST00000622493 ESR2Q92731 530 aa16.79■□□□□ 0.28
CLTCL1-212ENST00000622493 DPF2Q92785 391 aa16.79■□□□□ 0.28
CLTCL1-212ENST00000622493 TMEM87BQ96K49 555 aa16.79■□□□□ 0.28
CLTCL1-212ENST00000622493 ZNF287Q9HBT7 754 aa16.79■□□□□ 0.28
CLTCL1-212ENST00000622493 DDX60LQ5H9U9 1706 aaKnown RBP16.78■□□□□ 0.28
CLTCL1-212ENST00000622493 ADAMTSL1Q8N6G6 1762 aa16.78■□□□□ 0.28
CLTCL1-212ENST00000622493 B4E1Z4 1266 aa16.78■□□□□ 0.28
CLTCL1-212ENST00000622493 PRC1O43663 620 aa16.78■□□□□ 0.28
CLTCL1-212ENST00000622493 DLGAP5Q15398 846 aa16.78■□□□□ 0.28
CLTCL1-212ENST00000622493 INTS4Q96HW7 963 aaKnown RBP16.78■□□□□ 0.28
CLTCL1-212ENST00000622493 CYP2D7A0A087X1C5 515 aa16.77■□□□□ 0.28
CLTCL1-212ENST00000622493 ORC4O43929 436 aa16.77■□□□□ 0.28
CLTCL1-212ENST00000622493 ANTXR2P58335 489 aa16.77■□□□□ 0.28
CLTCL1-212ENST00000622493 NOL8Q76FK4 1167 aaKnown RBP16.77■□□□□ 0.28
CLTCL1-212ENST00000622493 TTC6Q86TZ1 520 aa16.77■□□□□ 0.28
CLTCL1-212ENST00000622493 TOMM22Q9NS69 142 aa16.77■□□□□ 0.28
CLTCL1-212ENST00000622493 ZSWIM5Q9P217 1185 aa16.77■□□□□ 0.28
CLTCL1-212ENST00000622493 TPCN1Q9ULQ1 816 aa16.77■□□□□ 0.28
CLTCL1-212ENST00000622493 TACC3Q9Y6A5 838 aa16.77■□□□□ 0.28
CLTCL1-212ENST00000622493 MYH1P12882 1939 aa16.77■□□□□ 0.27
CLTCL1-212ENST00000622493 SBF1O95248 1867 aa16.77■□□□□ 0.27
CLTCL1-212ENST00000622493 SPDYE2BA6NHP3 402 aa16.76■□□□□ 0.27
CLTCL1-212ENST00000622493 KDM4AO75164 1064 aa16.76■□□□□ 0.27
CLTCL1-212ENST00000622493 SPDYE6P0CI01 402 aa16.76■□□□□ 0.27
CLTCL1-212ENST00000622493 YBX3P16989 372 aaKnown RBP eCLIP16.76■□□□□ 0.27
CLTCL1-212ENST00000622493 EVCP57679 992 aa16.76■□□□□ 0.27
CLTCL1-212ENST00000622493 BRF1Q92994 677 aa16.76■□□□□ 0.27
CLTCL1-212ENST00000622493 PRMT6Q96LA8 375 aaPredicted RBP16.76■□□□□ 0.27
CLTCL1-212ENST00000622493 OSBPL5Q9H0X9 879 aaPredicted RBP16.76■□□□□ 0.27
CLTCL1-212ENST00000622493 TAOK2Q9UL54 1235 aa16.76■□□□□ 0.27
CLTCL1-212ENST00000622493 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.76■□□□□ 0.27
CLTCL1-212ENST00000622493 CYP2D6P10635 497 aa16.76■□□□□ 0.27
CLTCL1-212ENST00000622493 PLCD1P51178 756 aa16.76■□□□□ 0.27
CLTCL1-212ENST00000622493 ZNF280AP59817 542 aaPredicted RBP16.76■□□□□ 0.27
CLTCL1-212ENST00000622493 PICALMQ13492 652 aa16.76■□□□□ 0.27
CLTCL1-212ENST00000622493 SART3Q15020 963 aaKnown RBP16.76■□□□□ 0.27
CLTCL1-212ENST00000622493 RRP12Q5JTH9 1297 aaKnown RBP16.76■□□□□ 0.27
CLTCL1-212ENST00000622493 CYB5R4Q7L1T6 521 aa16.76■□□□□ 0.27
CLTCL1-212ENST00000622493 CHST3Q7LGC8 479 aa16.76■□□□□ 0.27
CLTCL1-212ENST00000622493 DHX36Q9H2U1 1008 aaKnown RBP16.76■□□□□ 0.27
CLTCL1-212ENST00000622493 CWC22Q9HCG8 908 aaKnown RBP16.76■□□□□ 0.27
CLTCL1-212ENST00000622493 DDX4Q9NQI0 724 aaKnown RBP16.76■□□□□ 0.27
CLTCL1-212ENST00000622493 INCENPQ9NQS7 918 aa16.76■□□□□ 0.27
CLTCL1-212ENST00000622493 TMOD2Q9NZR1 351 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms