RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 APPBP2Q92624 585 aa11.02□□□□□ -0.65
CLTCL1-211ENST00000621271 KIFC2Q96AC6 838 aa11.02□□□□□ -0.65
CLTCL1-211ENST00000621271 ABT1Q9ULW3 272 aaKnown RBP11.02□□□□□ -0.65
CLTCL1-211ENST00000621271 ARID5AQ03989 594 aa11.02□□□□□ -0.65
CLTCL1-211ENST00000621271 IQUBQ8NA54 791 aa11.02□□□□□ -0.65
CLTCL1-211ENST00000621271 TMEM87BQ96K49 555 aa11.02□□□□□ -0.65
CLTCL1-211ENST00000621271 STK24Q9Y6E0 443 aa11.02□□□□□ -0.65
CLTCL1-211ENST00000621271 B4E1Z4 1266 aa11.01□□□□□ -0.65
CLTCL1-211ENST00000621271 TCP10L2B9ZVM9 353 aa11.01□□□□□ -0.65
CLTCL1-211ENST00000621271 DDX39AO00148 427 aaKnown RBP11.01□□□□□ -0.65
CLTCL1-211ENST00000621271 CREB3L3Q68CJ9 461 aa11.01□□□□□ -0.65
CLTCL1-211ENST00000621271 NLRX1Q86UT6 975 aa11.01□□□□□ -0.65
CLTCL1-211ENST00000621271 IQCGQ9H095 443 aaKnown RBP11.01□□□□□ -0.65
CLTCL1-211ENST00000621271 LOC102724428A0A0B4J2F2 783 aa11.01□□□□□ -0.65
CLTCL1-211ENST00000621271 ATP2A1O14983 1001 aa11.01□□□□□ -0.65
CLTCL1-211ENST00000621271 SIK1P57059 783 aa11.01□□□□□ -0.65
CLTCL1-211ENST00000621271 SNX16P57768 344 aa11.01□□□□□ -0.65
CLTCL1-211ENST00000621271 GCKRQ14397 625 aa11.01□□□□□ -0.65
CLTCL1-211ENST00000621271 DOK7Q18PE1 504 aa11.01□□□□□ -0.65
CLTCL1-211ENST00000621271 FMNL3Q8IVF7 1028 aa11.01□□□□□ -0.65
CLTCL1-211ENST00000621271 CCDC50Q8IVM0 306 aa11.01□□□□□ -0.65
CLTCL1-211ENST00000621271 LMBR1Q8WVP7 490 aa11.01□□□□□ -0.65
CLTCL1-211ENST00000621271 PLIN2Q99541 437 aa11.01□□□□□ -0.65
CLTCL1-211ENST00000621271 ATF5Q9Y2D1 282 aaPredicted RBP11.01□□□□□ -0.65
CLTCL1-211ENST00000621271 GSTA5Q7RTV2 222 aa11.01□□□□□ -0.65
CLTCL1-211ENST00000621271 USPL1Q5W0Q7 1092 aa11.01□□□□□ -0.65
CLTCL1-211ENST00000621271 DBNDD2Q9BQY9 259 aa11.01□□□□□ -0.65
CLTCL1-211ENST00000621271 MLXIPQ9HAP2 919 aa11.01□□□□□ -0.65
CLTCL1-211ENST00000621271 NLRP1Q9C000 1473 aa11.01□□□□□ -0.65
CLTCL1-211ENST00000621271 COL17A1Q9UMD9 1497 aaPredicted RBP11.01□□□□□ -0.65
CLTCL1-211ENST00000621271 SEC24BO95487 1268 aa11□□□□□ -0.65
CLTCL1-211ENST00000621271 LTKP29376 864 aa11□□□□□ -0.65
CLTCL1-211ENST00000621271 ADCY7P51828 1080 aa11□□□□□ -0.65
CLTCL1-211ENST00000621271 CCNA1P78396 465 aa11□□□□□ -0.65
CLTCL1-211ENST00000621271 RAB3IL1Q8TBN0 382 aa11□□□□□ -0.65
CLTCL1-211ENST00000621271 KIAA1524Q8TCG1 905 aa11□□□□□ -0.65
CLTCL1-211ENST00000621271 SELENOOQ9BVL4 669 aa11□□□□□ -0.65
CLTCL1-211ENST00000621271 TMX1Q9H3N1 280 aa11□□□□□ -0.65
CLTCL1-211ENST00000621271 TTC37Q6PGP7 1564 aa11□□□□□ -0.65
CLTCL1-211ENST00000621271 PLCD1P51178 756 aa11□□□□□ -0.65
CLTCL1-211ENST00000621271 UBASH3AP57075 661 aa11□□□□□ -0.65
CLTCL1-211ENST00000621271 DCAF17Q5H9S7 520 aaPredicted RBP11□□□□□ -0.65
CLTCL1-211ENST00000621271 NEK11Q8NG66 645 aa11□□□□□ -0.65
CLTCL1-211ENST00000621271 TRMT1Q9NXH9 659 aaKnown RBP11□□□□□ -0.65
CLTCL1-211ENST00000621271 GAS8O95995 478 aa11□□□□□ -0.65
CLTCL1-211ENST00000621271 BRAPQ7Z569 592 aa11□□□□□ -0.65
CLTCL1-211ENST00000621271 NOX5Q96PH1 765 aa11□□□□□ -0.65
CLTCL1-211ENST00000621271 LZTS2Q9BRK4 669 aa11□□□□□ -0.65
CLTCL1-211ENST00000621271 GPAA1O43292 621 aa11□□□□□ -0.65
CLTCL1-211ENST00000621271 CERKQ8TCT0 537 aa11□□□□□ -0.65
CLTCL1-211ENST00000621271 PLEKHG3A1L390 1219 aa10.99□□□□□ -0.65
CLTCL1-211ENST00000621271 DEXIO95424 95 aa10.99□□□□□ -0.65
CLTCL1-211ENST00000621271 EPB41P11171 864 aaKnown RBP10.99□□□□□ -0.65
CLTCL1-211ENST00000621271 CEP135Q66GS9 1140 aa10.99□□□□□ -0.65
CLTCL1-211ENST00000621271 KRT222Q8N1A0 295 aa10.99□□□□□ -0.65
CLTCL1-211ENST00000621271 RNF169Q8NCN4 708 aa10.99□□□□□ -0.65
CLTCL1-211ENST00000621271 PROCA1Q8NCQ7 364 aaPredicted RBP10.99□□□□□ -0.65
CLTCL1-211ENST00000621271 CCDC94Q9BW85 323 aaPredicted RBP10.99□□□□□ -0.65
CLTCL1-211ENST00000621271 RASAL2Q9UJF2 1139 aa10.99□□□□□ -0.65
CLTCL1-211ENST00000621271 TMEM110-MUSTN1A8MSY1 372 aa10.99□□□□□ -0.65
CLTCL1-211ENST00000621271 KRT5P13647 590 aa10.99□□□□□ -0.65
CLTCL1-211ENST00000621271 SUPT20HL1Q3ZLR7 823 aa10.99□□□□□ -0.65
CLTCL1-211ENST00000621271 KMT5BQ4FZB7 885 aa10.99□□□□□ -0.65
CLTCL1-211ENST00000621271 NCAPH2Q6IBW4 605 aa10.99□□□□□ -0.65
CLTCL1-211ENST00000621271 ANKRD35Q8N283 1001 aa10.99□□□□□ -0.65
CLTCL1-211ENST00000621271 PPM1EQ8WY54 764 aa10.99□□□□□ -0.65
CLTCL1-211ENST00000621271 DCTPP1Q9H773 170 aa10.99□□□□□ -0.65
CLTCL1-211ENST00000621271 IBTKQ9P2D0 1353 aaPredicted RBP10.99□□□□□ -0.65
CLTCL1-211ENST00000621271 SLU7O95391 586 aaKnown RBP10.99□□□□□ -0.65
CLTCL1-211ENST00000621271 IL13P35225 146 aa10.99□□□□□ -0.65
CLTCL1-211ENST00000621271 MAPK8IP2Q13387 824 aaPredicted RBP10.99□□□□□ -0.65
CLTCL1-211ENST00000621271 CCDC14Q49A88 953 aa10.99□□□□□ -0.65
CLTCL1-211ENST00000621271 MAK16Q9BXY0 300 aaKnown RBP10.99□□□□□ -0.65
CLTCL1-211ENST00000621271 TXNDC16Q9P2K2 825 aa10.99□□□□□ -0.65
CLTCL1-211ENST00000621271 PNMA2Q9UL42 364 aa10.99□□□□□ -0.65
CLTCL1-211ENST00000621271 ATP6V0A2Q9Y487 856 aa10.99□□□□□ -0.65
CLTCL1-211ENST00000621271 KDM2BQ8NHM5 1336 aa10.99□□□□□ -0.65
CLTCL1-211ENST00000621271 CCNT1O60563 726 aaKnown RBP10.99□□□□□ -0.65
CLTCL1-211ENST00000621271 PHKG2P15735 406 aa10.99□□□□□ -0.65
CLTCL1-211ENST00000621271 CTSWP56202 376 aa10.99□□□□□ -0.65
CLTCL1-211ENST00000621271 HSP90AA4PQ58FG1 418 aa10.99□□□□□ -0.65
CLTCL1-211ENST00000621271 ARMC9Q7Z3E5 817 aa10.99□□□□□ -0.65
CLTCL1-211ENST00000621271 NCAPG2Q86XI2 1143 aa10.99□□□□□ -0.65
CLTCL1-211ENST00000621271 KLHDC4Q8TBB5 520 aa10.99□□□□□ -0.65
CLTCL1-211ENST00000621271 KIFAP3Q92845 792 aa10.99□□□□□ -0.65
CLTCL1-211ENST00000621271 ZNF830Q96NB3 372 aaPredicted RBP10.99□□□□□ -0.65
CLTCL1-211ENST00000621271 KCNG1Q9UIX4 513 aa10.99□□□□□ -0.65
CLTCL1-211ENST00000621271 VWA3AA6NCI4 1184 aa10.99□□□□□ -0.65
CLTCL1-211ENST00000621271 ZNF174Q15697 407 aa10.99□□□□□ -0.65
CLTCL1-211ENST00000621271 V9GY48 417 aaPredicted RBP10.99□□□□□ -0.65
CLTCL1-211ENST00000621271 POLR3GO15318 223 aaPredicted RBP10.98□□□□□ -0.65
CLTCL1-211ENST00000621271 SCNN1DP51172 638 aa10.98□□□□□ -0.65
CLTCL1-211ENST00000621271 CKAP4Q07065 602 aaKnown RBP10.98□□□□□ -0.65
CLTCL1-211ENST00000621271 DPP9Q86TI2 863 aa10.98□□□□□ -0.65
CLTCL1-211ENST00000621271 NPHP4O75161 1426 aaPredicted RBP10.98□□□□□ -0.65
CLTCL1-211ENST00000621271 SHTN1A0MZ66 631 aa10.98□□□□□ -0.65
CLTCL1-211ENST00000621271 SNW1Q13573 536 aaKnown RBP10.98□□□□□ -0.65
CLTCL1-211ENST00000621271 SEPT12Q8IYM1 358 aa10.98□□□□□ -0.65
CLTCL1-211ENST00000621271 TRPC6Q9Y210 931 aa10.98□□□□□ -0.65
CLTCL1-211ENST00000621271 ARHGEF12Q9NZN5 1544 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms