RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 RPS6KB1P23443 525 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 FMR1Q06787 632 aaKnown RBP eCLIP3.46□□□□□ -1.86
NEB-220ENST00000618972 CTAGE4Q8IX94 777 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 SMC1BQ8NDV3 1235 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 H3BQF6 201 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 IGKV5-2P06315 115 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 LRRC45Q96CN5 670 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 NEK1Q96PY6 1258 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 RNMTO43148 476 aaKnown RBP3.46□□□□□ -1.86
NEB-220ENST00000618972 KRT86O43790 486 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 ELP1O95163 1332 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 DDX58O95786 925 aaKnown RBP3.46□□□□□ -1.86
NEB-220ENST00000618972 BMP15O95972 392 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 EIF2S1P05198 315 aaKnown RBP3.46□□□□□ -1.86
NEB-220ENST00000618972 ZMYM3Q14202 1370 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.46□□□□□ -1.86
NEB-220ENST00000618972 TRIM22Q8IYM9 498 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 CCDC84Q86UT8 332 aaPredicted RBP3.46□□□□□ -1.86
NEB-220ENST00000618972 ALS2CR12Q96Q35 445 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 HOMER2Q9NSB8 354 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 PPP2R3AQ06190 1150 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 LLGL1Q15334 1064 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 ABCB6Q9NP58 842 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 STXBP3O00186 592 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 ATP2B2Q01814 1243 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 KRBA2Q6ZNG9 492 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 SMARCC2Q8TAQ2 1214 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 GOLGA1Q92805 767 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 ZBTB3Q9H5J0 574 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 LZTFL1Q9NQ48 299 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 RAD50Q92878 1312 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 PPP1R2P41236 205 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 BLVRAP53004 296 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 FAM212AQ96EL1 285 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.46□□□□□ -1.86
NEB-220ENST00000618972 SESN3P58005 492 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 STK38Q15208 465 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 ZC4H2Q9NQZ6 224 aa3.46□□□□□ -1.86
NEB-220ENST00000618972 A0A087WZG4 1122 aa3.45□□□□□ -1.86
NEB-220ENST00000618972 NEDD9Q14511 834 aa3.45□□□□□ -1.86
NEB-220ENST00000618972 CXorf38Q8TB03 319 aa3.45□□□□□ -1.86
NEB-220ENST00000618972 PCDHA5Q9Y5H7 936 aa3.45□□□□□ -1.86
NEB-220ENST00000618972 U3KPZ7 1027 aaPredicted RBP3.45□□□□□ -1.86
NEB-220ENST00000618972 LMNAP02545 664 aaKnown RBP3.45□□□□□ -1.86
NEB-220ENST00000618972 RIOK1Q9BRS2 568 aaKnown RBP3.45□□□□□ -1.86
NEB-220ENST00000618972 NSD3Q9BZ95 1437 aa3.45□□□□□ -1.86
NEB-220ENST00000618972 KIF5AQ12840 1032 aa3.45□□□□□ -1.86
NEB-220ENST00000618972 OTUD6AQ7L8S5 288 aa3.45□□□□□ -1.86
NEB-220ENST00000618972 FAM76AQ8TAV0 307 aa3.45□□□□□ -1.86
NEB-220ENST00000618972 POTEB3A0JP26 581 aa3.45□□□□□ -1.86
NEB-220ENST00000618972 KIF28PB7ZC32 967 aa3.45□□□□□ -1.86
NEB-220ENST00000618972 ATP2C2O75185 946 aa3.45□□□□□ -1.86
NEB-220ENST00000618972 POTEBQ6S5H4 581 aa3.45□□□□□ -1.86
NEB-220ENST00000618972 SCAPERQ9BY12 1400 aa3.45□□□□□ -1.86
NEB-220ENST00000618972 PRDM1O75626 825 aa3.45□□□□□ -1.86
NEB-220ENST00000618972 UBE3BQ7Z3V4 1068 aa3.45□□□□□ -1.86
NEB-220ENST00000618972 PDE11AQ9HCR9 933 aa3.45□□□□□ -1.86
NEB-220ENST00000618972 PIH1D3Q9NQM4 214 aaKnown RBP3.45□□□□□ -1.86
NEB-220ENST00000618972 PPP1R1BQ9UD71 204 aaPredicted RBP3.45□□□□□ -1.86
NEB-220ENST00000618972 KSR2Q6VAB6 950 aa3.45□□□□□ -1.86
NEB-220ENST00000618972 TOGARAM2Q6ZUX3 1019 aa3.45□□□□□ -1.86
NEB-220ENST00000618972 FANCGO15287 622 aa3.45□□□□□ -1.86
NEB-220ENST00000618972 ANKRD7Q92527 254 aa3.45□□□□□ -1.86
NEB-220ENST00000618972 EVI5LQ96CN4 794 aa3.45□□□□□ -1.86
NEB-220ENST00000618972 NLRP3Q96P20 1036 aa3.45□□□□□ -1.86
NEB-220ENST00000618972 TSG101Q99816 390 aa3.45□□□□□ -1.86
NEB-220ENST00000618972 RAB34Q9BZG1 259 aa3.45□□□□□ -1.86
NEB-220ENST00000618972 DRC3Q9H069 523 aa3.45□□□□□ -1.86
NEB-220ENST00000618972 HDAC6Q9UBN7 1215 aa3.45□□□□□ -1.86
NEB-220ENST00000618972 DDX41Q9UJV9 622 aaKnown RBP3.45□□□□□ -1.86
NEB-220ENST00000618972 RABGAP1Q9Y3P9 1069 aa3.45□□□□□ -1.86
NEB-220ENST00000618972 EIF3AQ14152 1382 aaKnown RBP3.45□□□□□ -1.86
NEB-220ENST00000618972 M0R2C6 588 aa3.45□□□□□ -1.86
NEB-220ENST00000618972 ZAP70P43403 619 aa3.45□□□□□ -1.86
NEB-220ENST00000618972 SLC51AQ86UW1 340 aa3.45□□□□□ -1.86
NEB-220ENST00000618972 FAM89AQ96GI7 184 aa3.45□□□□□ -1.86
NEB-220ENST00000618972 DDX19AQ9NUU7 478 aaKnown RBP3.45□□□□□ -1.86
NEB-220ENST00000618972 IKBKGQ9Y6K9 419 aa3.45□□□□□ -1.86
NEB-220ENST00000618972 HSPA8P11142 646 aaKnown RBP3.45□□□□□ -1.86
NEB-220ENST00000618972 SCRN1Q12765 414 aa3.45□□□□□ -1.86
NEB-220ENST00000618972 SSH3Q8TE77 659 aa3.45□□□□□ -1.86
NEB-220ENST00000618972 PPP1R14BQ96C90 147 aa3.45□□□□□ -1.86
NEB-220ENST00000618972 FRA10AC1Q70Z53 315 aa3.45□□□□□ -1.86
NEB-220ENST00000618972 MAP4K1Q92918 833 aa3.45□□□□□ -1.86
NEB-220ENST00000618972 PLCB1Q9NQ66 1216 aa3.45□□□□□ -1.86
NEB-220ENST00000618972 UBASH3AP57075 661 aa3.45□□□□□ -1.86
NEB-220ENST00000618972 SEMA3FQ13275 785 aa3.45□□□□□ -1.86
NEB-220ENST00000618972 CNTROBQ8N137 903 aa3.45□□□□□ -1.86
NEB-220ENST00000618972 HPS3Q969F9 1004 aa3.45□□□□□ -1.86
NEB-220ENST00000618972 PDCD2Q16342 344 aaPredicted RBP3.45□□□□□ -1.86
NEB-220ENST00000618972 CCDC150Q8NCX0 1101 aa3.45□□□□□ -1.86
NEB-220ENST00000618972 GIGYF1O75420 1035 aaPredicted RBP3.45□□□□□ -1.86
NEB-220ENST00000618972 KRR1Q13601 381 aaKnown RBP3.45□□□□□ -1.86
NEB-220ENST00000618972 ARHGAP10A1A4S6 786 aa3.45□□□□□ -1.86
NEB-220ENST00000618972 GNAT3A8MTJ3 354 aa3.45□□□□□ -1.86
NEB-220ENST00000618972 PLEKHO1Q53GL0 409 aaPredicted RBP3.45□□□□□ -1.86
NEB-220ENST00000618972 SPAG5Q96R06 1193 aa3.45□□□□□ -1.86
NEB-220ENST00000618972 SLF1Q9BQI6 1058 aa3.45□□□□□ -1.86
NEB-220ENST00000618972 SEC63Q9UGP8 760 aaKnown RBP3.45□□□□□ -1.86
NEB-220ENST00000618972 CDC27P30260 824 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms