RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 UBL4BQ8N7F7 174 aa19.47■□□□□ 0.71
HMGXB3-206ENST00000613459 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.47■□□□□ 0.71
HMGXB3-206ENST00000613459 FYB2Q5VWT5 728 aa19.47■□□□□ 0.71
HMGXB3-206ENST00000613459 PLBD2Q8NHP8 589 aa19.47■□□□□ 0.71
HMGXB3-206ENST00000613459 TRAF5O00463 557 aa19.47■□□□□ 0.71
HMGXB3-206ENST00000613459 TNFAIP3P21580 790 aa19.47■□□□□ 0.71
HMGXB3-206ENST00000613459 IFT20Q8IY31 132 aa19.47■□□□□ 0.71
HMGXB3-206ENST00000613459 NUCKS1Q9H1E3 243 aaKnown RBP19.47■□□□□ 0.71
HMGXB3-206ENST00000613459 KCNH3Q9ULD8 1083 aa19.47■□□□□ 0.71
HMGXB3-206ENST00000613459 RTCBQ9Y3I0 505 aaKnown RBP19.47■□□□□ 0.71
HMGXB3-206ENST00000613459 VGLL3A8MV65 326 aa19.46■□□□□ 0.71
HMGXB3-206ENST00000613459 STX10O60499 249 aa19.46■□□□□ 0.71
HMGXB3-206ENST00000613459 PSMD1Q99460 953 aa19.46■□□□□ 0.71
HMGXB3-206ENST00000613459 MKRN1Q9UHC7 482 aaKnown RBP19.46■□□□□ 0.71
HMGXB3-206ENST00000613459 PPP1R9BQ96SB3 815 aa19.46■□□□□ 0.71
HMGXB3-206ENST00000613459 TLDC2A0PJX2 215 aa19.46■□□□□ 0.71
HMGXB3-206ENST00000613459 ARL1P40616 181 aaPredicted RBP19.46■□□□□ 0.71
HMGXB3-206ENST00000613459 APPBP2Q92624 585 aa19.46■□□□□ 0.71
HMGXB3-206ENST00000613459 BICC1Q9H694 974 aaKnown RBP19.46■□□□□ 0.71
HMGXB3-206ENST00000613459 ZRANB1Q9UGI0 708 aa19.46■□□□□ 0.71
HMGXB3-206ENST00000613459 CTNND2Q9UQB3 1225 aa19.46■□□□□ 0.71
HMGXB3-206ENST00000613459 ZBTB7BO15156 539 aaPredicted RBP19.46■□□□□ 0.71
HMGXB3-206ENST00000613459 MYCNP04198 464 aaPredicted RBP19.46■□□□□ 0.71
HMGXB3-206ENST00000613459 RUFY4Q6ZNE9 571 aa19.46■□□□□ 0.71
HMGXB3-206ENST00000613459 RBM17Q96I25 401 aaKnown RBP19.46■□□□□ 0.71
HMGXB3-206ENST00000613459 FAM184BQ9ULE4 1060 aa19.46■□□□□ 0.71
HMGXB3-206ENST00000613459 IQSEC3Q9UPP2 1182 aaPredicted RBP19.46■□□□□ 0.71
HMGXB3-206ENST00000613459 SBNO2Q9Y2G9 1366 aa19.46■□□□□ 0.71
HMGXB3-206ENST00000613459 C8orf74Q6P047 294 aa19.46■□□□□ 0.71
HMGXB3-206ENST00000613459 MYRIPQ8NFW9 859 aa19.46■□□□□ 0.71
HMGXB3-206ENST00000613459 NOX5Q96PH1 765 aa19.46■□□□□ 0.71
HMGXB3-206ENST00000613459 VWA3AA6NCI4 1184 aa19.45■□□□□ 0.7
HMGXB3-206ENST00000613459 MBD4O95243 580 aa19.45■□□□□ 0.7
HMGXB3-206ENST00000613459 PUM3Q15397 648 aaKnown RBP19.45■□□□□ 0.7
HMGXB3-206ENST00000613459 ASIC2Q16515 512 aa19.45■□□□□ 0.7
HMGXB3-206ENST00000613459 IP6K1Q92551 441 aa19.45■□□□□ 0.7
HMGXB3-206ENST00000613459 SLC27A2O14975 620 aa19.45■□□□□ 0.7
HMGXB3-206ENST00000613459 GMNNO75496 209 aa19.45■□□□□ 0.7
HMGXB3-206ENST00000613459 ZNF445P59923 1031 aa19.45■□□□□ 0.7
HMGXB3-206ENST00000613459 PDE4DQ08499 809 aa19.45■□□□□ 0.7
HMGXB3-206ENST00000613459 ANGEL1Q9UNK9 670 aaKnown RBP19.45■□□□□ 0.7
HMGXB3-206ENST00000613459 SYNRGQ9UMZ2 1314 aa19.45■□□□□ 0.7
HMGXB3-206ENST00000613459 YTHDC2Q9H6S0 1430 aaKnown RBP19.45■□□□□ 0.7
HMGXB3-206ENST00000613459 NLRP12P59046 1061 aa19.45■□□□□ 0.7
HMGXB3-206ENST00000613459 RAPGEF1Q13905 1077 aa19.45■□□□□ 0.7
HMGXB3-206ENST00000613459 CETN3O15182 167 aa19.45■□□□□ 0.7
HMGXB3-206ENST00000613459 ARHGAP25P42331 645 aa19.45■□□□□ 0.7
HMGXB3-206ENST00000613459 KRT25Q7Z3Z0 450 aa19.45■□□□□ 0.7
HMGXB3-206ENST00000613459 FNBP1Q96RU3 617 aa19.45■□□□□ 0.7
HMGXB3-206ENST00000613459 NUP153P49790 1475 aaKnown RBP19.44■□□□□ 0.7
HMGXB3-206ENST00000613459 SLC8A3P57103 927 aa19.44■□□□□ 0.7
HMGXB3-206ENST00000613459 TESK2Q96S53 571 aa19.44■□□□□ 0.7
HMGXB3-206ENST00000613459 UTP11Q9Y3A2 253 aaKnown RBP19.44■□□□□ 0.7
HMGXB3-206ENST00000613459 SYCP2Q9BX26 1530 aa19.44■□□□□ 0.7
HMGXB3-206ENST00000613459 ZWINTO95229 277 aa19.44■□□□□ 0.7
HMGXB3-206ENST00000613459 INPP5BP32019 993 aa19.44■□□□□ 0.7
HMGXB3-206ENST00000613459 CCT6AP40227 531 aaKnown RBP19.44■□□□□ 0.7
HMGXB3-206ENST00000613459 PAK1Q13153 545 aa19.44■□□□□ 0.7
HMGXB3-206ENST00000613459 KCNG1Q9UIX4 513 aa19.44■□□□□ 0.7
HMGXB3-206ENST00000613459 CCDC25Q86WR0 208 aa19.44■□□□□ 0.7
HMGXB3-206ENST00000613459 METTL22Q9BUU2 404 aaPredicted RBP19.44■□□□□ 0.7
HMGXB3-206ENST00000613459 RBSNQ9H1K0 784 aa19.44■□□□□ 0.7
HMGXB3-206ENST00000613459 ODF2LQ9ULJ1 636 aa19.44■□□□□ 0.7
HMGXB3-206ENST00000613459 ARHGAP6O43182 974 aa19.44■□□□□ 0.7
HMGXB3-206ENST00000613459 TNNI3KQ59H18 835 aa19.44■□□□□ 0.7
HMGXB3-206ENST00000613459 DCAF17Q5H9S7 520 aaPredicted RBP19.44■□□□□ 0.7
HMGXB3-206ENST00000613459 PAXIP1Q6ZW49 1069 aaPredicted RBP19.44■□□□□ 0.7
HMGXB3-206ENST00000613459 SYCE1Q8N0S2 351 aa19.44■□□□□ 0.7
HMGXB3-206ENST00000613459 FPGT-TNNI3KV9GXZ4 949 aa19.44■□□□□ 0.7
HMGXB3-206ENST00000613459 U2AF2P26368 475 aaKnown RBP eCLIP19.43■□□□□ 0.76e-9■■■■□ 22.7
HMGXB3-206ENST00000613459 CWF19L2Q2TBE0 894 aaKnown RBP19.43■□□□□ 0.7
HMGXB3-206ENST00000613459 MIGA1Q8NAN2 632 aa19.43■□□□□ 0.7
HMGXB3-206ENST00000613459 RNF123Q5XPI4 1314 aa19.43■□□□□ 0.7
HMGXB3-206ENST00000613459 MAIP1Q8WWC4 291 aa19.43■□□□□ 0.7
HMGXB3-206ENST00000613459 RPGRIP1Q96KN7 1286 aa19.43■□□□□ 0.7
HMGXB3-206ENST00000613459 A0A1B0GVL5 298 aa19.43■□□□□ 0.7
HMGXB3-206ENST00000613459 F8W031 263 aaPredicted RBP19.43■□□□□ 0.7
HMGXB3-206ENST00000613459 SPOPO43791 374 aa19.43■□□□□ 0.7
HMGXB3-206ENST00000613459 VIMP08670 466 aaKnown RBP19.43■□□□□ 0.7
HMGXB3-206ENST00000613459 RLBP1P12271 317 aa19.43■□□□□ 0.7
HMGXB3-206ENST00000613459 MTMR3Q13615 1198 aa19.43■□□□□ 0.7
HMGXB3-206ENST00000613459 NFATC2IPQ8NCF5 419 aa19.43■□□□□ 0.7
HMGXB3-206ENST00000613459 ABCC10Q5T3U5 1492 aa19.43■□□□□ 0.7
HMGXB3-206ENST00000613459 GOLGA6CA6NDK9 693 aa19.43■□□□□ 0.7
HMGXB3-206ENST00000613459 GOLGA6DP0CG33 693 aa19.43■□□□□ 0.7
HMGXB3-206ENST00000613459 LEO1Q8WVC0 666 aaPredicted RBP19.43■□□□□ 0.7
HMGXB3-206ENST00000613459 GOLGA6AQ9NYA3 693 aa19.43■□□□□ 0.7
HMGXB3-206ENST00000613459 PARP3Q9Y6F1 533 aa19.43■□□□□ 0.7
HMGXB3-206ENST00000613459 SLC9C1Q4G0N8 1177 aa19.43■□□□□ 0.7
HMGXB3-206ENST00000613459 ZNF75DP51815 510 aa19.42■□□□□ 0.7
HMGXB3-206ENST00000613459 FANCCQ00597 558 aa19.42■□□□□ 0.7
HMGXB3-206ENST00000613459 TAOK1Q7L7X3 1001 aa19.42■□□□□ 0.7
HMGXB3-206ENST00000613459 CCDC117Q8IWD4 279 aaPredicted RBP19.42■□□□□ 0.7
HMGXB3-206ENST00000613459 AFAP1L2Q8N4X5 818 aa19.42■□□□□ 0.7
HMGXB3-206ENST00000613459 SECISBP2LQ93073 1101 aaKnown RBP19.42■□□□□ 0.7
HMGXB3-206ENST00000613459 CCDC51Q96ER9 411 aa19.42■□□□□ 0.7
HMGXB3-206ENST00000613459 FAM204AQ9H8W3 233 aa19.42■□□□□ 0.7
HMGXB3-206ENST00000613459 NDUFAB1O14561 156 aa19.42■□□□□ 0.7
HMGXB3-206ENST00000613459 ZNF174Q15697 407 aa19.42■□□□□ 0.7
HMGXB3-206ENST00000613459 CEP85LQ5SZL2 805 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms