RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 LARP6Q9BRS8 491 aaKnown RBP21.26■□□□□ 0.99
VRK3-225ENST00000601912 FOXD4L1Q9NU39 408 aa21.26■□□□□ 0.99
VRK3-225ENST00000601912 INTS4Q96HW7 963 aaKnown RBP21.25■□□□□ 0.99
VRK3-225ENST00000601912 ZDHHC15Q96MV8 337 aa21.25■□□□□ 0.99
VRK3-225ENST00000601912 TOMM22Q9NS69 142 aa21.25■□□□□ 0.99
VRK3-225ENST00000601912 MKRN1Q9UHC7 482 aaKnown RBP21.25■□□□□ 0.99
VRK3-225ENST00000601912 SERPINA10Q9UK55 444 aa21.25■□□□□ 0.99
VRK3-225ENST00000601912 BAZ2AQ9UIF9 1905 aaKnown RBP21.25■□□□□ 0.99
VRK3-225ENST00000601912 PSMD14O00487 310 aa21.24■□□□□ 0.99
VRK3-225ENST00000601912 PRC1O43663 620 aa21.24■□□□□ 0.99
VRK3-225ENST00000601912 RBM5P52756 815 aaKnown RBP eCLIP21.24■□□□□ 0.99
VRK3-225ENST00000601912 FBXL16Q8N461 479 aa21.24■□□□□ 0.99
VRK3-225ENST00000601912 LRRC2Q9BYS8 371 aa21.24■□□□□ 0.99
VRK3-225ENST00000601912 NEDD4P46934 1319 aa21.24■□□□□ 0.99
VRK3-225ENST00000601912 ARFGEF1Q9Y6D6 1849 aa21.24■□□□□ 0.99
VRK3-225ENST00000601912 TIAM2Q8IVF5 1701 aa21.24■□□□□ 0.99
VRK3-225ENST00000601912 B4E1Z4 1266 aa21.24■□□□□ 0.99
VRK3-225ENST00000601912 CHST3Q7LGC8 479 aa21.24■□□□□ 0.99
VRK3-225ENST00000601912 MAPKAPK5Q8IW41 473 aa21.24■□□□□ 0.99
VRK3-225ENST00000601912 BRF1Q92994 677 aa21.24■□□□□ 0.99
VRK3-225ENST00000601912 AGXT2Q9BYV1 514 aa21.24■□□□□ 0.99
VRK3-225ENST00000601912 CWC22Q9HCG8 908 aaKnown RBP21.24■□□□□ 0.99
VRK3-225ENST00000601912 USP40Q9NVE5 1235 aa21.24■□□□□ 0.99
VRK3-225ENST00000601912 TPCN1Q9ULQ1 816 aa21.24■□□□□ 0.99
VRK3-225ENST00000601912 PSME4Q14997 1843 aa21.23■□□□□ 0.99
VRK3-225ENST00000601912 COL4A5P29400 1685 aa21.23■□□□□ 0.99
VRK3-225ENST00000601912 APOBEC3HQ6NTF7 200 aaKnown RBP21.23■□□□□ 0.99
VRK3-225ENST00000601912 HDAC9Q9UKV0 1011 aa21.23■□□□□ 0.99
VRK3-225ENST00000601912 ZNF646O15015 1829 aaPredicted RBP21.23■□□□□ 0.99
VRK3-225ENST00000601912 GOLGB1Q14789 3259 aaKnown RBP21.22■□□□□ 0.99
VRK3-225ENST00000601912 CYP2D7A0A087X1C5 515 aa21.22■□□□□ 0.99
VRK3-225ENST00000601912 POLR3DP05423 398 aaPredicted RBP21.22■□□□□ 0.99
VRK3-225ENST00000601912 USP17L8P0C7I0 530 aa21.22■□□□□ 0.99
VRK3-225ENST00000601912 RRP12Q5JTH9 1297 aaKnown RBP21.22■□□□□ 0.99
VRK3-225ENST00000601912 C12orf60Q5U649 245 aa21.22■□□□□ 0.99
VRK3-225ENST00000601912 STK11IPQ8N1F8 1099 aa21.22■□□□□ 0.99
VRK3-225ENST00000601912 INCENPQ9NQS7 918 aa21.22■□□□□ 0.99
VRK3-225ENST00000601912 KDM4AO75164 1064 aa21.21■□□□□ 0.99
VRK3-225ENST00000601912 CXCL9Q07325 125 aa21.21■□□□□ 0.99
VRK3-225ENST00000601912 PDE4BQ07343 736 aa21.21■□□□□ 0.99
VRK3-225ENST00000601912 TNIP1Q15025 636 aa21.21■□□□□ 0.99
VRK3-225ENST00000601912 ME3Q16798 604 aa21.21■□□□□ 0.99
VRK3-225ENST00000601912 CIAPIN1Q6FI81 312 aa21.21■□□□□ 0.99
VRK3-225ENST00000601912 CDC42EP5Q6NZY7 148 aa21.21■□□□□ 0.99
VRK3-225ENST00000601912 OGFOD1Q8N543 542 aa21.21■□□□□ 0.99
VRK3-225ENST00000601912 AGBL3Q8NEM8 1001 aa21.21■□□□□ 0.99
VRK3-225ENST00000601912 ESR2Q92731 530 aa21.21■□□□□ 0.99
VRK3-225ENST00000601912 TMEM87BQ96K49 555 aa21.21■□□□□ 0.99
VRK3-225ENST00000601912 SYT17Q9BSW7 474 aa21.21■□□□□ 0.99
VRK3-225ENST00000601912 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.21■□□□□ 0.99
VRK3-225ENST00000601912 FLT1P17948 1338 aa21.21■□□□□ 0.99
VRK3-225ENST00000601912 FGRP09769 529 aa21.21■□□□□ 0.99
VRK3-225ENST00000601912 ANTXR2P58335 489 aa21.21■□□□□ 0.99
VRK3-225ENST00000601912 RASSF7Q02833 373 aa21.21■□□□□ 0.99
VRK3-225ENST00000601912 CHMP5Q9NZZ3 219 aa21.21■□□□□ 0.99
VRK3-225ENST00000601912 ZSWIM5Q9P217 1185 aa21.21■□□□□ 0.99
VRK3-225ENST00000601912 CIZ1Q9ULV3 898 aaPredicted RBP21.21■□□□□ 0.99
VRK3-225ENST00000601912 SART3Q15020 963 aaKnown RBP21.2■□□□□ 0.98
VRK3-225ENST00000601912 CYB5R4Q7L1T6 521 aa21.2■□□□□ 0.98
VRK3-225ENST00000601912 GMLQ99445 158 aa21.2■□□□□ 0.98
VRK3-225ENST00000601912 TACC3Q9Y6A5 838 aa21.2■□□□□ 0.98
VRK3-225ENST00000601912 LARGE1O95461 756 aa21.19■□□□□ 0.98
VRK3-225ENST00000601912 CYP2D6P10635 497 aa21.19■□□□□ 0.98
VRK3-225ENST00000601912 NT5C2P49902 561 aa21.19■□□□□ 0.98
VRK3-225ENST00000601912 ARHGAP27Q6ZUM4 889 aa21.19■□□□□ 0.98
VRK3-225ENST00000601912 MTA3Q9BTC8 594 aa21.19■□□□□ 0.98
VRK3-225ENST00000601912 SAP30BPQ9UHR5 308 aaKnown RBP21.19■□□□□ 0.98
VRK3-225ENST00000601912 ANGEL1Q9UNK9 670 aaKnown RBP21.19■□□□□ 0.98
VRK3-225ENST00000601912 NAV1Q8NEY1 1877 aa21.19■□□□□ 0.98
VRK3-225ENST00000601912 ORC4O43929 436 aa21.18■□□□□ 0.98
VRK3-225ENST00000601912 WDHD1O75717 1129 aaPredicted RBP21.18■□□□□ 0.98
VRK3-225ENST00000601912 DDIT3P35638 169 aa21.18■□□□□ 0.98
VRK3-225ENST00000601912 APOBRQ0VD83 1088 aa21.18■□□□□ 0.98
VRK3-225ENST00000601912 PICALMQ13492 652 aa21.18■□□□□ 0.98
VRK3-225ENST00000601912 CFAP100Q494V2 611 aa21.18■□□□□ 0.98
VRK3-225ENST00000601912 CCDC83Q8IWF9 413 aa21.18■□□□□ 0.98
VRK3-225ENST00000601912 CHMP4CQ96CF2 233 aa21.18■□□□□ 0.98
VRK3-225ENST00000601912 ZNF287Q9HBT7 754 aa21.18■□□□□ 0.98
VRK3-225ENST00000601912 LAMB1P07942 1786 aa21.18■□□□□ 0.98
VRK3-225ENST00000601912 ERICH2A1L162 156 aa21.18■□□□□ 0.98
VRK3-225ENST00000601912 EIF6P56537 245 aaKnown RBP21.18■□□□□ 0.98
VRK3-225ENST00000601912 ZNF274Q96GC6 653 aaPredicted RBP21.18■□□□□ 0.98
VRK3-225ENST00000601912 ZBTB12Q9Y330 459 aaPredicted RBP21.18■□□□□ 0.98
VRK3-225ENST00000601912 CDK5RAP2Q96SN8 1893 aa21.18■□□□□ 0.98
VRK3-225ENST00000601912 SMIM22K7EJ46 135 aa21.17■□□□□ 0.98
VRK3-225ENST00000601912 IFIT3O14879 490 aaKnown RBP21.17■□□□□ 0.98
VRK3-225ENST00000601912 RANBP6O60518 1105 aaKnown RBP21.17■□□□□ 0.98
VRK3-225ENST00000601912 MMP14P50281 582 aa21.17■□□□□ 0.98
VRK3-225ENST00000601912 EVCP57679 992 aa21.17■□□□□ 0.98
VRK3-225ENST00000601912 SLC4A8Q2Y0W8 1093 aa21.17■□□□□ 0.98
VRK3-225ENST00000601912 TMEM67Q5HYA8 995 aa21.17■□□□□ 0.98
VRK3-225ENST00000601912 TTC6Q86TZ1 520 aa21.17■□□□□ 0.98
VRK3-225ENST00000601912 NECAB1Q8N987 351 aa21.17■□□□□ 0.98
VRK3-225ENST00000601912 UBAC1Q9BSL1 405 aa21.17■□□□□ 0.98
VRK3-225ENST00000601912 NAP1L2Q9ULW6 460 aaPredicted RBP21.17■□□□□ 0.98
VRK3-225ENST00000601912 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.17■□□□□ 0.98
VRK3-225ENST00000601912 ROBO3Q96MS0 1386 aa21.17■□□□□ 0.98
VRK3-225ENST00000601912 SH2B2O14492 632 aaPredicted RBP21.16■□□□□ 0.98
VRK3-225ENST00000601912 STK3Q13188 491 aa21.16■□□□□ 0.98
VRK3-225ENST00000601912 IGDCC4Q8TDY8 1250 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms