RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 PTPRFP10586 1907 aa18.7■□□□□ 0.58
TGFB1-202ENST00000597453 PHIPQ8WWQ0 1821 aa18.7■□□□□ 0.58
TGFB1-202ENST00000597453 POTEFA5A3E0 1075 aa18.69■□□□□ 0.58
TGFB1-202ENST00000597453 DDTLA6NHG4 134 aaPredicted RBP18.69■□□□□ 0.58
TGFB1-202ENST00000597453 PHF20L1A8MW92 1017 aa18.69■□□□□ 0.58
TGFB1-202ENST00000597453 ARID4AP29374 1257 aaPredicted RBP18.69■□□□□ 0.58
TGFB1-202ENST00000597453 RHBDL3P58872 404 aa18.69■□□□□ 0.58
TGFB1-202ENST00000597453 PICALMQ13492 652 aa18.69■□□□□ 0.58
TGFB1-202ENST00000597453 MOGSQ13724 837 aa18.69■□□□□ 0.58
TGFB1-202ENST00000597453 POLA2Q14181 598 aa18.69■□□□□ 0.58
TGFB1-202ENST00000597453 GORABQ5T7V8 394 aa18.69■□□□□ 0.58
TGFB1-202ENST00000597453 SLF2Q8IX21 1173 aa18.69■□□□□ 0.58
TGFB1-202ENST00000597453 ARMC5Q96C12 935 aa18.69■□□□□ 0.58
TGFB1-202ENST00000597453 ARHGAP39Q9C0H5 1083 aa18.69■□□□□ 0.58
TGFB1-202ENST00000597453 GPR75-ASB3A0A0A6YYF3 556 aa18.68■□□□□ 0.58
TGFB1-202ENST00000597453 MCAMP43121 646 aa18.68■□□□□ 0.58
TGFB1-202ENST00000597453 ZSCAN29Q8IWY8 852 aaPredicted RBP18.68■□□□□ 0.58
TGFB1-202ENST00000597453 NSUN4Q96CB9 384 aaKnown RBP18.68■□□□□ 0.58
TGFB1-202ENST00000597453 PTCH2Q9Y6C5 1203 aa18.68■□□□□ 0.58
TGFB1-202ENST00000597453 MYO5AQ9Y4I1 1855 aaKnown RBP18.68■□□□□ 0.58
TGFB1-202ENST00000597453 MAST2Q6P0Q8 1798 aa18.68■□□□□ 0.58
TGFB1-202ENST00000597453 RLBP1P12271 317 aa18.67■□□□□ 0.58
TGFB1-202ENST00000597453 LACTBP83111 547 aaPredicted RBP18.67■□□□□ 0.58
TGFB1-202ENST00000597453 ANKRD23Q86SG2 305 aa18.67■□□□□ 0.58
TGFB1-202ENST00000597453 SSH3Q8TE77 659 aa18.67■□□□□ 0.58
TGFB1-202ENST00000597453 MKI67P46013 3256 aaKnown RBP18.66■□□□□ 0.58
TGFB1-202ENST00000597453 PDHXO00330 501 aa18.66■□□□□ 0.58
TGFB1-202ENST00000597453 ATP8B2P98198 1209 aa18.66■□□□□ 0.58
TGFB1-202ENST00000597453 MAP3K10Q02779 954 aa18.66■□□□□ 0.58
TGFB1-202ENST00000597453 C17orf99Q6UX52 265 aa18.66■□□□□ 0.58
TGFB1-202ENST00000597453 SCYL3Q8IZE3 742 aa18.66■□□□□ 0.58
TGFB1-202ENST00000597453 RAI14Q9P0K7 980 aa18.66■□□□□ 0.58
TGFB1-202ENST00000597453 CPA4Q9UI42 421 aa18.66■□□□□ 0.58
TGFB1-202ENST00000597453 ADGRA2Q96PE1 1338 aa18.66■□□□□ 0.58
TGFB1-202ENST00000597453 CDK5RAP2Q96SN8 1893 aa18.65■□□□□ 0.58
TGFB1-202ENST00000597453 ECM2O94769 699 aaPredicted RBP18.65■□□□□ 0.58
TGFB1-202ENST00000597453 CTGFP29279 349 aa18.65■□□□□ 0.58
TGFB1-202ENST00000597453 ARHGEF6Q15052 776 aa18.65■□□□□ 0.58
TGFB1-202ENST00000597453 TNNI3KQ59H18 835 aa18.65■□□□□ 0.58
TGFB1-202ENST00000597453 ITPRIPQ8IWB1 547 aa18.65■□□□□ 0.58
TGFB1-202ENST00000597453 FTSJ3Q8IY81 847 aaKnown RBP18.65■□□□□ 0.58
TGFB1-202ENST00000597453 DBNDD2Q9BQY9 259 aa18.65■□□□□ 0.58
TGFB1-202ENST00000597453 GPR108Q9NPR9 543 aa18.65■□□□□ 0.58
TGFB1-202ENST00000597453 SNRKQ9NRH2 765 aa18.65■□□□□ 0.58
TGFB1-202ENST00000597453 FPGT-TNNI3KV9GXZ4 949 aa18.65■□□□□ 0.58
TGFB1-202ENST00000597453 ATAD5Q96QE3 1844 aa18.65■□□□□ 0.58
TGFB1-202ENST00000597453 CXCL11O14625 94 aa18.64■□□□□ 0.57
TGFB1-202ENST00000597453 UQCRFS1P1P0C7P4 283 aa18.64■□□□□ 0.57
TGFB1-202ENST00000597453 PTPRAP18433 802 aa18.64■□□□□ 0.57
TGFB1-202ENST00000597453 GSTO1P78417 241 aa18.64■□□□□ 0.57
TGFB1-202ENST00000597453 OS9Q13438 667 aaPredicted RBP18.64■□□□□ 0.57
TGFB1-202ENST00000597453 GPAT2Q6NUI2 795 aa18.64■□□□□ 0.57
TGFB1-202ENST00000597453 ZNF333Q96JL9 665 aa18.64■□□□□ 0.57
TGFB1-202ENST00000597453 PICK1Q9NRD5 415 aa18.64■□□□□ 0.57
TGFB1-202ENST00000597453 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.64■□□□□ 0.57
TGFB1-202ENST00000597453 ZHX2Q9Y6X8 837 aa18.64■□□□□ 0.57
TGFB1-202ENST00000597453 SIPA1L1O43166 1804 aa18.63■□□□□ 0.57
TGFB1-202ENST00000597453 MGAMO43451 1857 aa18.63■□□□□ 0.57
TGFB1-202ENST00000597453 FAM196BA6NMK8 535 aa18.63■□□□□ 0.57
TGFB1-202ENST00000597453 ZBTB7BO15156 539 aaPredicted RBP18.63■□□□□ 0.57
TGFB1-202ENST00000597453 SURF6O75683 361 aaKnown RBP18.63■□□□□ 0.57
TGFB1-202ENST00000597453 LDHCP07864 332 aa18.63■□□□□ 0.57
TGFB1-202ENST00000597453 SLC9C1Q4G0N8 1177 aa18.63■□□□□ 0.57
TGFB1-202ENST00000597453 PRPF38BQ5VTL8 546 aaKnown RBP18.63■□□□□ 0.57
TGFB1-202ENST00000597453 A0A0G2JLL6 359 aaPredicted RBP18.62■□□□□ 0.57
TGFB1-202ENST00000597453 NPM3O75607 178 aaKnown RBP18.62■□□□□ 0.57
TGFB1-202ENST00000597453 SLC34A2O95436 690 aa18.62■□□□□ 0.57
TGFB1-202ENST00000597453 CYP2C8P10632 490 aa18.62■□□□□ 0.57
TGFB1-202ENST00000597453 KIF22Q14807 665 aa18.62■□□□□ 0.57
TGFB1-202ENST00000597453 TTC39AQ5SRH9 613 aa18.62■□□□□ 0.57
TGFB1-202ENST00000597453 PRRT2Q7Z6L0 340 aaPredicted RBP18.62■□□□□ 0.57
TGFB1-202ENST00000597453 CCDC84Q86UT8 332 aaPredicted RBP18.62■□□□□ 0.57
TGFB1-202ENST00000597453 LRP2BPQ9P2M1 347 aa18.62■□□□□ 0.57
TGFB1-202ENST00000597453 AFG3L2Q9Y4W6 797 aa18.62■□□□□ 0.57
TGFB1-202ENST00000597453 COL2A1P02458 1487 aaPredicted RBP18.62■□□□□ 0.57
TGFB1-202ENST00000597453 FOCADQ5VW36 1801 aa18.62■□□□□ 0.57
TGFB1-202ENST00000597453 CTNND1O60716 968 aaKnown RBP18.61■□□□□ 0.57
TGFB1-202ENST00000597453 EN2P19622 333 aaPredicted RBP18.61■□□□□ 0.57
TGFB1-202ENST00000597453 SH3RF3Q8TEJ3 882 aaPredicted RBP18.61■□□□□ 0.57
TGFB1-202ENST00000597453 SH3TC2Q8TF17 1288 aa18.61■□□□□ 0.57
TGFB1-202ENST00000597453 TRIM47Q96LD4 638 aa18.61■□□□□ 0.57
TGFB1-202ENST00000597453 OSBPL5Q9H0X9 879 aaPredicted RBP18.61■□□□□ 0.57
TGFB1-202ENST00000597453 TLR7Q9NYK1 1049 aaKnown RBP18.61■□□□□ 0.57
TGFB1-202ENST00000597453 NOP58Q9Y2X3 529 aaKnown RBP18.61■□□□□ 0.57
TGFB1-202ENST00000597453 TBC1D12O60347 775 aa18.6■□□□□ 0.57
TGFB1-202ENST00000597453 MAP4K4O95819 1239 aaPredicted RBP18.6■□□□□ 0.57
TGFB1-202ENST00000597453 CYP2E1P05181 493 aaPredicted RBP18.6■□□□□ 0.57
TGFB1-202ENST00000597453 CCDC158Q5M9N0 1113 aa18.6■□□□□ 0.57
TGFB1-202ENST00000597453 TEX11Q8IYF3 940 aa18.6■□□□□ 0.57
TGFB1-202ENST00000597453 PARK7Q99497 189 aaKnown RBP18.6■□□□□ 0.57
TGFB1-202ENST00000597453 DBNLQ9UJU6 430 aaKnown RBP18.6■□□□□ 0.57
TGFB1-202ENST00000597453 MYCP01106 439 aaPredicted RBP18.59■□□□□ 0.57
TGFB1-202ENST00000597453 GNRH1P01148 92 aa18.59■□□□□ 0.57
TGFB1-202ENST00000597453 BCRP11274 1271 aa18.59■□□□□ 0.57
TGFB1-202ENST00000597453 PSMC4P43686 418 aa18.59■□□□□ 0.57
TGFB1-202ENST00000597453 GADL1Q6ZQY3 521 aa18.59■□□□□ 0.57
TGFB1-202ENST00000597453 ADGRA1Q86SQ6 560 aa18.59■□□□□ 0.57
TGFB1-202ENST00000597453 NBPF11Q86T75 865 aa18.59■□□□□ 0.57
TGFB1-202ENST00000597453 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.59■□□□□ 0.57
TGFB1-202ENST00000597453 RCAN3Q9UKA8 241 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms