RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 FAM151AQ8WW52 585 aa27.08■■□□□ 1.93
SNRNP70-204ENST00000595231 TMEM39BQ9GZU3 492 aa27.08■■□□□ 1.93
SNRNP70-204ENST00000595231 TNNI2P48788 182 aa27.08■■□□□ 1.92
SNRNP70-204ENST00000595231 MAPKAPK5Q8IW41 473 aa27.08■■□□□ 1.92
SNRNP70-204ENST00000595231 FLT1P17948 1338 aa27.07■■□□□ 1.92
SNRNP70-204ENST00000595231 PRAMEF18Q5VWM3 479 aa27.07■■□□□ 1.92
SNRNP70-204ENST00000595231 SMC1BQ8NDV3 1235 aa27.07■■□□□ 1.92
SNRNP70-204ENST00000595231 TEPSINQ96N21 525 aa27.07■■□□□ 1.92
SNRNP70-204ENST00000595231 SLC4A4Q9Y6R1 1079 aa27.07■■□□□ 1.92
SNRNP70-204ENST00000595231 FOXP2O15409 715 aa27.06■■□□□ 1.92
SNRNP70-204ENST00000595231 CDC45O75419 566 aa27.06■■□□□ 1.92
SNRNP70-204ENST00000595231 USP5P45974 858 aa27.06■■□□□ 1.92
SNRNP70-204ENST00000595231 CDAN1Q8IWY9 1227 aa27.06■■□□□ 1.92
SNRNP70-204ENST00000595231 OSBPL5Q9H0X9 879 aaPredicted RBP27.06■■□□□ 1.92
SNRNP70-204ENST00000595231 PPP2R3BQ9Y5P8 575 aa27.06■■□□□ 1.92
SNRNP70-204ENST00000595231 GSG1L2A8MUP6 293 aa27.05■■□□□ 1.92
SNRNP70-204ENST00000595231 TRAF5O00463 557 aa27.05■■□□□ 1.92
SNRNP70-204ENST00000595231 SH3BP5LQ7L8J4 393 aa27.05■■□□□ 1.92
SNRNP70-204ENST00000595231 DCP1AQ9NPI6 582 aaPredicted RBP27.05■■□□□ 1.92
SNRNP70-204ENST00000595231 CCDC171Q6TFL3 1326 aa27.05■■□□□ 1.92
SNRNP70-204ENST00000595231 GNAT2P19087 354 aa27.05■■□□□ 1.92
SNRNP70-204ENST00000595231 FMR1Q06787 632 aaKnown RBP eCLIP27.05■■□□□ 1.923e-8■■□□□ 11.4
SNRNP70-204ENST00000595231 VPS53Q5VIR6 699 aa27.05■■□□□ 1.92
SNRNP70-204ENST00000595231 PATL2C9JE40 543 aaKnown RBP27.04■■□□□ 1.92
SNRNP70-204ENST00000595231 SGSM2O43147 1006 aa27.04■■□□□ 1.92
SNRNP70-204ENST00000595231 RUFY2Q8WXA3 655 aa27.04■■□□□ 1.92
SNRNP70-204ENST00000595231 ATP8A2Q9NTI2 1148 aa27.04■■□□□ 1.92
SNRNP70-204ENST00000595231 DDTLA6NHG4 134 aaPredicted RBP27.03■■□□□ 1.92
SNRNP70-204ENST00000595231 RAD50Q92878 1312 aa27.03■■□□□ 1.92
SNRNP70-204ENST00000595231 CDCA5Q96FF9 252 aa27.02■■□□□ 1.92
SNRNP70-204ENST00000595231 EPB41L4AQ9HCS5 686 aaPredicted RBP27.02■■□□□ 1.92
SNRNP70-204ENST00000595231 ATRNL1Q5VV63 1379 aa27.02■■□□□ 1.92
SNRNP70-204ENST00000595231 RPAP1Q9BWH6 1393 aaPredicted RBP27.02■■□□□ 1.92
SNRNP70-204ENST00000595231 COL2A1P02458 1487 aaPredicted RBP27.02■■□□□ 1.92
SNRNP70-204ENST00000595231 NBPF12Q5TAG4 269 aaPredicted RBP27.01■■□□□ 1.92
SNRNP70-204ENST00000595231 ESYT1Q9BSJ8 1104 aa27.01■■□□□ 1.92
SNRNP70-204ENST00000595231 PALD1Q9ULE6 856 aa27.01■■□□□ 1.92
SNRNP70-204ENST00000595231 MYH1P12882 1939 aa27.01■■□□□ 1.91
SNRNP70-204ENST00000595231 DDX60LQ5H9U9 1706 aaKnown RBP27.01■■□□□ 1.91
SNRNP70-204ENST00000595231 BAZ2AQ9UIF9 1905 aaKnown RBP27.01■■□□□ 1.91
SNRNP70-204ENST00000595231 HSPD1P10809 573 aaKnown RBP27.01■■□□□ 1.91
SNRNP70-204ENST00000595231 MFAP1P55081 439 aaKnown RBP27.01■■□□□ 1.91
SNRNP70-204ENST00000595231 FSTL1Q12841 308 aa27.01■■□□□ 1.91
SNRNP70-204ENST00000595231 GIMAP6Q6P9H5 292 aa27.01■■□□□ 1.91
SNRNP70-204ENST00000595231 SAP30BPQ9UHR5 308 aaKnown RBP27.01■■□□□ 1.91
SNRNP70-204ENST00000595231 IFNL3Q8IZI9 196 aa27■■□□□ 1.91
SNRNP70-204ENST00000595231 PASKQ96RG2 1323 aa27■■□□□ 1.91
SNRNP70-204ENST00000595231 NAV1Q8NEY1 1877 aa26.99■■□□□ 1.91
SNRNP70-204ENST00000595231 APPP05067 770 aa26.99■■□□□ 1.91
SNRNP70-204ENST00000595231 DHX36Q9H2U1 1008 aaKnown RBP26.99■■□□□ 1.91
SNRNP70-204ENST00000595231 MCM9Q9NXL9 1143 aa26.99■■□□□ 1.91
SNRNP70-204ENST00000595231 CASC1Q6TDU7 716 aa26.98■■□□□ 1.91
SNRNP70-204ENST00000595231 ZSCAN29Q8IWY8 852 aaPredicted RBP26.98■■□□□ 1.91
SNRNP70-204ENST00000595231 SSC5DA1L4H1 1573 aa26.98■■□□□ 1.91
SNRNP70-204ENST00000595231 CSRNP1Q96S65 589 aa26.98■■□□□ 1.91
SNRNP70-204ENST00000595231 USP17L12C9JPN9 530 aa26.97■■□□□ 1.91
SNRNP70-204ENST00000595231 USP17L21D6R901 530 aa26.97■■□□□ 1.91
SNRNP70-204ENST00000595231 SLC4A8Q2Y0W8 1093 aa26.97■■□□□ 1.91
SNRNP70-204ENST00000595231 CTR9Q6PD62 1173 aa26.97■■□□□ 1.91
SNRNP70-204ENST00000595231 PLCD1P51178 756 aa26.96■■□□□ 1.91
SNRNP70-204ENST00000595231 EVX2Q03828 476 aa26.96■■□□□ 1.91
SNRNP70-204ENST00000595231 ALX1Q15699 326 aa26.96■■□□□ 1.91
SNRNP70-204ENST00000595231 SUPT20HL1Q3ZLR7 823 aa26.96■■□□□ 1.91
SNRNP70-204ENST00000595231 DDRGK1Q96HY6 314 aa26.96■■□□□ 1.91
SNRNP70-204ENST00000595231 NACAP1Q9BZK3 213 aa26.96■■□□□ 1.91
SNRNP70-204ENST00000595231 SIPA1L1O43166 1804 aa26.96■■□□□ 1.91
SNRNP70-204ENST00000595231 FGAP02671 866 aa26.95■■□□□ 1.91
SNRNP70-204ENST00000595231 SLURP2P0DP57 97 aa26.95■■□□□ 1.91
SNRNP70-204ENST00000595231 CST9Q5W186 159 aa26.95■■□□□ 1.91
SNRNP70-204ENST00000595231 DSCC1Q9BVC3 393 aa26.95■■□□□ 1.91
SNRNP70-204ENST00000595231 PI4KBQ9UBF8 816 aa26.95■■□□□ 1.91
SNRNP70-204ENST00000595231 CYP2D7A0A087X1C5 515 aa26.95■■□□□ 1.9
SNRNP70-204ENST00000595231 SMIM22K7EJ46 135 aa26.95■■□□□ 1.9
SNRNP70-204ENST00000595231 CYP2D6P10635 497 aa26.95■■□□□ 1.9
SNRNP70-204ENST00000595231 PTH1RQ03431 593 aa26.95■■□□□ 1.9
SNRNP70-204ENST00000595231 SBK1Q52WX2 424 aa26.95■■□□□ 1.9
SNRNP70-204ENST00000595231 TRPM7Q96QT4 1865 aa26.94■■□□□ 1.9
SNRNP70-204ENST00000595231 POLR3DP05423 398 aaPredicted RBP26.94■■□□□ 1.9
SNRNP70-204ENST00000595231 TDO2P48775 406 aa26.94■■□□□ 1.9
SNRNP70-204ENST00000595231 MAP3K10Q02779 954 aa26.94■■□□□ 1.9
SNRNP70-204ENST00000595231 C12orf60Q5U649 245 aa26.94■■□□□ 1.9
SNRNP70-204ENST00000595231 METTL16Q86W50 562 aaKnown RBP26.94■■□□□ 1.9
SNRNP70-204ENST00000595231 NAPBQ9H115 298 aa26.94■■□□□ 1.9
SNRNP70-204ENST00000595231 MIGA2Q7L4E1 593 aa26.93■■□□□ 1.9
SNRNP70-204ENST00000595231 TTC6Q86TZ1 520 aa26.93■■□□□ 1.9
SNRNP70-204ENST00000595231 ZNF408Q9H9D4 720 aa26.93■■□□□ 1.9
SNRNP70-204ENST00000595231 ARPP21Q9UBL0 812 aaPredicted RBP26.93■■□□□ 1.9
SNRNP70-204ENST00000595231 FZD1Q9UP38 647 aa26.93■■□□□ 1.9
SNRNP70-204ENST00000595231 CELF2O95319 508 aaKnown RBP26.92■■□□□ 1.9
SNRNP70-204ENST00000595231 LSG1Q9H089 658 aaKnown RBP26.92■■□□□ 1.9
SNRNP70-204ENST00000595231 ZMYM6O95789 1325 aa26.92■■□□□ 1.9
SNRNP70-204ENST00000595231 HLA-DOAP06340 250 aa26.92■■□□□ 1.9
SNRNP70-204ENST00000595231 FOXP4Q8IVH2 680 aaPredicted RBP26.92■■□□□ 1.9
SNRNP70-204ENST00000595231 TBC1D12O60347 775 aa26.91■■□□□ 1.9
SNRNP70-204ENST00000595231 NF2P35240 595 aa26.91■■□□□ 1.9
SNRNP70-204ENST00000595231 MAP4K1Q92918 833 aa26.91■■□□□ 1.9
SNRNP70-204ENST00000595231 HOOK2Q96ED9 719 aa26.91■■□□□ 1.9
SNRNP70-204ENST00000595231 EHD4Q9H223 541 aa26.91■■□□□ 1.9
SNRNP70-204ENST00000595231 DNAJC18Q9H819 358 aa26.91■■□□□ 1.9
SNRNP70-204ENST00000595231 USP2O75604 605 aaPredicted RBP26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms