RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 CLASRPQ8N2M8 674 aaKnown RBP27.3■■□□□ 1.96
GTF2F1-204ENST00000594965 ZNF112Q9UJU3 913 aa27.3■■□□□ 1.96
GTF2F1-204ENST00000594965 CSADQ9Y600 493 aa27.3■■□□□ 1.96
GTF2F1-204ENST00000594965 DDTLA6NHG4 134 aaPredicted RBP27.29■■□□□ 1.96
GTF2F1-204ENST00000594965 INPP5BP32019 993 aa27.29■■□□□ 1.96
GTF2F1-204ENST00000594965 INHBEP58166 350 aa27.29■■□□□ 1.96
GTF2F1-204ENST00000594965 PICALMQ13492 652 aa27.29■■□□□ 1.96
GTF2F1-204ENST00000594965 IFNL1Q8IU54 200 aa27.29■■□□□ 1.96
GTF2F1-204ENST00000594965 TESPA1A2RU30 521 aaPredicted RBP27.28■■□□□ 1.96
GTF2F1-204ENST00000594965 SPDYE5A6NIY4 337 aa27.28■■□□□ 1.96
GTF2F1-204ENST00000594965 IGF2BP3O00425 579 aaKnown RBP eCLIP27.28■■□□□ 1.96
GTF2F1-204ENST00000594965 NPM3O75607 178 aaKnown RBP27.28■■□□□ 1.96
GTF2F1-204ENST00000594965 MAP4K4O95819 1239 aaPredicted RBP27.28■■□□□ 1.96
GTF2F1-204ENST00000594965 MS4A4AQ96JQ5 239 aa27.28■■□□□ 1.96
GTF2F1-204ENST00000594965 CFHR5Q9BXR6 569 aa27.28■■□□□ 1.96
GTF2F1-204ENST00000594965 R3HDMLQ9H3Y0 253 aa27.28■■□□□ 1.96
GTF2F1-204ENST00000594965 ANTXR1Q9H6X2 564 aa27.28■■□□□ 1.96
GTF2F1-204ENST00000594965 IGSF3O75054 1194 aa27.27■■□□□ 1.96
GTF2F1-204ENST00000594965 PTPN18Q99952 460 aa27.27■■□□□ 1.96
GTF2F1-204ENST00000594965 SIPA1L1O43166 1804 aa27.27■■□□□ 1.96
GTF2F1-204ENST00000594965 SLURP2P0DP57 97 aa27.26■■□□□ 1.95
GTF2F1-204ENST00000594965 MAP3K10Q02779 954 aa27.26■■□□□ 1.95
GTF2F1-204ENST00000594965 SH3RF3Q8TEJ3 882 aaPredicted RBP27.26■■□□□ 1.95
GTF2F1-204ENST00000594965 OTUD5Q96G74 571 aa27.26■■□□□ 1.95
GTF2F1-204ENST00000594965 AATFQ9NY61 560 aaKnown RBP eCLIP27.26■■□□□ 1.95
GTF2F1-204ENST00000594965 PPP4CP60510 307 aa27.25■■□□□ 1.95
GTF2F1-204ENST00000594965 ERO1BQ86YB8 467 aa27.25■■□□□ 1.95
GTF2F1-204ENST00000594965 DOCK1Q14185 1865 aa27.24■■□□□ 1.95
GTF2F1-204ENST00000594965 PHF20L1A8MW92 1017 aa27.24■■□□□ 1.95
GTF2F1-204ENST00000594965 ALDH1A1P00352 501 aa27.24■■□□□ 1.95
GTF2F1-204ENST00000594965 IFIT2P09913 472 aaKnown RBP27.24■■□□□ 1.95
GTF2F1-204ENST00000594965 ZSCAN29Q8IWY8 852 aaPredicted RBP27.24■■□□□ 1.95
GTF2F1-204ENST00000594965 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.24■■□□□ 1.95
GTF2F1-204ENST00000594965 COL2A1P02458 1487 aaPredicted RBP27.24■■□□□ 1.95
GTF2F1-204ENST00000594965 PHIPQ8WWQ0 1821 aa27.23■■□□□ 1.95
GTF2F1-204ENST00000594965 TEX11Q8IYF3 940 aa27.23■■□□□ 1.95
GTF2F1-204ENST00000594965 OSBPL5Q9H0X9 879 aaPredicted RBP27.23■■□□□ 1.95
GTF2F1-204ENST00000594965 BCL11AQ9H165 835 aa27.23■■□□□ 1.95
GTF2F1-204ENST00000594965 PCDHB15Q9Y5E8 787 aa27.23■■□□□ 1.95
GTF2F1-204ENST00000594965 GPR25O00155 361 aa27.22■■□□□ 1.95
GTF2F1-204ENST00000594965 CAPN15O75808 1086 aa27.22■■□□□ 1.95
GTF2F1-204ENST00000594965 IDH1O75874 414 aaKnown RBP27.22■■□□□ 1.95
GTF2F1-204ENST00000594965 NOM1Q5C9Z4 860 aaKnown RBP27.22■■□□□ 1.95
GTF2F1-204ENST00000594965 NOL9Q5SY16 702 aaKnown RBP27.22■■□□□ 1.95
GTF2F1-204ENST00000594965 BRI3BPQ8WY22 251 aa27.22■■□□□ 1.95
GTF2F1-204ENST00000594965 DCTPP1Q9H773 170 aa27.22■■□□□ 1.95
GTF2F1-204ENST00000594965 ATAD5Q96QE3 1844 aa27.22■■□□□ 1.95
GTF2F1-204ENST00000594965 MYH1P12882 1939 aa27.22■■□□□ 1.95
GTF2F1-204ENST00000594965 IRF6O14896 467 aa27.21■■□□□ 1.95
GTF2F1-204ENST00000594965 SMARCA5O60264 1052 aaPredicted RBP27.21■■□□□ 1.95
GTF2F1-204ENST00000594965 BAG3O95817 575 aa27.21■■□□□ 1.95
GTF2F1-204ENST00000594965 CYP7A1P22680 504 aa27.21■■□□□ 1.95
GTF2F1-204ENST00000594965 GTF2A2P52657 109 aa27.21■■□□□ 1.95
GTF2F1-204ENST00000594965 PPIL2Q13356 520 aa27.21■■□□□ 1.95
GTF2F1-204ENST00000594965 ZNF296Q8WUU4 475 aaPredicted RBP27.21■■□□□ 1.95
GTF2F1-204ENST00000594965 NOL10Q9BSC4 688 aaKnown RBP27.21■■□□□ 1.95
GTF2F1-204ENST00000594965 MCOLN1Q9GZU1 580 aa27.21■■□□□ 1.95
GTF2F1-204ENST00000594965 CCL15-CCL14A0A0B4J2E2 113 aa27.2■■□□□ 1.94
GTF2F1-204ENST00000594965 PPATQ06203 517 aa27.2■■□□□ 1.94
GTF2F1-204ENST00000594965 DGKZQ13574 1117 aa27.2■■□□□ 1.94
GTF2F1-204ENST00000594965 CCL15Q16663 113 aa27.2■■□□□ 1.94
GTF2F1-204ENST00000594965 MAGEB6Q8N7X4 407 aa27.2■■□□□ 1.94
GTF2F1-204ENST00000594965 ABHD8Q96I13 439 aa27.2■■□□□ 1.94
GTF2F1-204ENST00000594965 LRRCC1Q9C099 1032 aa27.2■■□□□ 1.94
GTF2F1-204ENST00000594965 PTPRFP10586 1907 aa27.2■■□□□ 1.94
GTF2F1-204ENST00000594965 MYH7P12883 1935 aa27.2■■□□□ 1.94
GTF2F1-204ENST00000594965 PLCG2P16885 1265 aa27.19■■□□□ 1.94
GTF2F1-204ENST00000594965 DYNLL1P63167 89 aaKnown RBP27.19■■□□□ 1.94
GTF2F1-204ENST00000594965 CRBNQ96SW2 442 aa27.19■■□□□ 1.94
GTF2F1-204ENST00000594965 TBC1D12O60347 775 aa27.18■■□□□ 1.94
GTF2F1-204ENST00000594965 MAP3K12Q12852 859 aa27.18■■□□□ 1.94
GTF2F1-204ENST00000594965 OTUD7BQ6GQQ9 843 aa27.17■■□□□ 1.94
GTF2F1-204ENST00000594965 TGFBRAP1Q8WUH2 860 aa27.17■■□□□ 1.94
GTF2F1-204ENST00000594965 FAM196BA6NMK8 535 aa27.16■■□□□ 1.94
GTF2F1-204ENST00000594965 ATP5JP18859 108 aa27.16■■□□□ 1.94
GTF2F1-204ENST00000594965 CRHR2Q13324 411 aa27.16■■□□□ 1.94
GTF2F1-204ENST00000594965 TTF1Q15361 905 aaPredicted RBP27.16■■□□□ 1.94
GTF2F1-204ENST00000594965 SCYL3Q8IZE3 742 aa27.16■■□□□ 1.94
GTF2F1-204ENST00000594965 FAM43AQ8N2R8 423 aa27.16■■□□□ 1.94
GTF2F1-204ENST00000594965 MIGA1Q8NAN2 632 aa27.16■■□□□ 1.94
GTF2F1-204ENST00000594965 EDC3Q96F86 508 aaKnown RBP27.16■■□□□ 1.94
GTF2F1-204ENST00000594965 DNAJC2Q99543 621 aaKnown RBP27.16■■□□□ 1.94
GTF2F1-204ENST00000594965 KCNH4Q9UQ05 1017 aa27.16■■□□□ 1.94
GTF2F1-204ENST00000594965 FLT1P17948 1338 aa27.16■■□□□ 1.94
GTF2F1-204ENST00000594965 GOLIM4O00461 696 aa27.15■■□□□ 1.94
GTF2F1-204ENST00000594965 CETPP11597 493 aa27.15■■□□□ 1.94
GTF2F1-204ENST00000594965 SNAPC2Q13487 334 aa27.15■■□□□ 1.94
GTF2F1-204ENST00000594965 MAPKAPK5Q8IW41 473 aa27.15■■□□□ 1.94
GTF2F1-204ENST00000594965 BOLA2Q9H3K6 86 aa27.15■■□□□ 1.94
GTF2F1-204ENST00000594965 FKTNO75072 461 aa27.14■■□□□ 1.94
GTF2F1-204ENST00000594965 TMED8Q6PL24 325 aaPredicted RBP27.14■■□□□ 1.94
GTF2F1-204ENST00000594965 CTU1Q7Z7A3 348 aaKnown RBP27.14■■□□□ 1.94
GTF2F1-204ENST00000594965 CTNND1O60716 968 aaKnown RBP27.13■■□□□ 1.93
GTF2F1-204ENST00000594965 PTPRAP18433 802 aa27.13■■□□□ 1.93
GTF2F1-204ENST00000594965 HAUS7Q99871 368 aa27.13■■□□□ 1.93
GTF2F1-204ENST00000594965 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.13■■□□□ 1.93
GTF2F1-204ENST00000594965 DDX60LQ5H9U9 1706 aaKnown RBP27.13■■□□□ 1.93
GTF2F1-204ENST00000594965 BTBD19C9JJ37 291 aa27.12■■□□□ 1.93
GTF2F1-204ENST00000594965 PDE6AP16499 860 aa27.12■■□□□ 1.93
GTF2F1-204ENST00000594965 MOGSQ13724 837 aa27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms