RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 MAPKAPK5Q8IW41 473 aa23.02■■□□□ 1.28
DDX39A-214ENST00000590556 TEPSINQ96N21 525 aa23.02■■□□□ 1.28
DDX39A-214ENST00000590556 SEC62Q99442 399 aaKnown RBP23.02■■□□□ 1.28
DDX39A-214ENST00000590556 HELLSQ9NRZ9 838 aa23.02■■□□□ 1.28
DDX39A-214ENST00000590556 TRPM7Q96QT4 1865 aa23.02■■□□□ 1.28
DDX39A-214ENST00000590556 NMIQ13287 307 aaPredicted RBP23.01■■□□□ 1.27
DDX39A-214ENST00000590556 NBPF12Q5TAG4 269 aaPredicted RBP23.01■■□□□ 1.27
DDX39A-214ENST00000590556 ZSCAN29Q8IWY8 852 aaPredicted RBP23.01■■□□□ 1.27
DDX39A-214ENST00000590556 FAM227BQ96M60 508 aa23.01■■□□□ 1.27
DDX39A-214ENST00000590556 STRBPQ96SI9 672 aaKnown RBP23.01■■□□□ 1.27
DDX39A-214ENST00000590556 OSBPL5Q9H0X9 879 aaPredicted RBP23.01■■□□□ 1.27
DDX39A-214ENST00000590556 FLT1P17948 1338 aa23.01■■□□□ 1.27
DDX39A-214ENST00000590556 FOCADQ5VW36 1801 aa23.01■■□□□ 1.27
DDX39A-214ENST00000590556 GPAA1O43292 621 aa23■■□□□ 1.27
DDX39A-214ENST00000590556 CDAN1Q8IWY9 1227 aa23■■□□□ 1.27
DDX39A-214ENST00000590556 SLC4A4Q9Y6R1 1079 aa23■■□□□ 1.27
DDX39A-214ENST00000590556 RPAP1Q9BWH6 1393 aaPredicted RBP23■■□□□ 1.27
DDX39A-214ENST00000590556 A0A0D9SFI3 127 aa22.99■■□□□ 1.27
DDX39A-214ENST00000590556 PRKAB2O43741 272 aa22.99■■□□□ 1.27
DDX39A-214ENST00000590556 MCMDC2Q4G0Z9 681 aa22.99■■□□□ 1.27
DDX39A-214ENST00000590556 CST9Q5W186 159 aa22.99■■□□□ 1.27
DDX39A-214ENST00000590556 SDR42E1Q8WUS8 393 aa22.99■■□□□ 1.27
DDX39A-214ENST00000590556 GNAT2P19087 354 aa22.98■■□□□ 1.27
DDX39A-214ENST00000590556 APLP1P51693 650 aa22.98■■□□□ 1.27
DDX39A-214ENST00000590556 CWC27Q6UX04 472 aaKnown RBP22.98■■□□□ 1.27
DDX39A-214ENST00000590556 SH3BP5LQ7L8J4 393 aa22.98■■□□□ 1.27
DDX39A-214ENST00000590556 HOOK2Q96ED9 719 aa22.98■■□□□ 1.27
DDX39A-214ENST00000590556 SAP30BPQ9UHR5 308 aaKnown RBP22.98■■□□□ 1.27
DDX39A-214ENST00000590556 DDTLA6NHG4 134 aaPredicted RBP22.97■■□□□ 1.27
DDX39A-214ENST00000590556 TMEM88BA6NKF7 163 aa22.97■■□□□ 1.27
DDX39A-214ENST00000590556 CCDC129Q6ZRS4 1044 aa22.97■■□□□ 1.27
DDX39A-214ENST00000590556 CSRNP1Q96S65 589 aa22.97■■□□□ 1.27
DDX39A-214ENST00000590556 ATP8A2Q9NTI2 1148 aa22.97■■□□□ 1.27
DDX39A-214ENST00000590556 COL2A1P02458 1487 aaPredicted RBP22.97■■□□□ 1.27
DDX39A-214ENST00000590556 CHMLP26374 656 aa22.96■■□□□ 1.27
DDX39A-214ENST00000590556 TTLL12Q14166 644 aaPredicted RBP22.96■■□□□ 1.27
DDX39A-214ENST00000590556 C2orf69Q8N8R5 385 aa22.96■■□□□ 1.27
DDX39A-214ENST00000590556 DDRGK1Q96HY6 314 aa22.96■■□□□ 1.27
DDX39A-214ENST00000590556 DHX36Q9H2U1 1008 aaKnown RBP22.96■■□□□ 1.27
DDX39A-214ENST00000590556 GBA2Q9HCG7 927 aaPredicted RBP22.96■■□□□ 1.27
DDX39A-214ENST00000590556 DCP1AQ9NPI6 582 aaPredicted RBP22.96■■□□□ 1.27
DDX39A-214ENST00000590556 MKRN1Q9UHC7 482 aaKnown RBP22.96■■□□□ 1.27
DDX39A-214ENST00000590556 PALD1Q9ULE6 856 aa22.96■■□□□ 1.27
DDX39A-214ENST00000590556 ATRNL1Q5VV63 1379 aa22.96■■□□□ 1.27
DDX39A-214ENST00000590556 MYH1P12882 1939 aa22.96■■□□□ 1.27
DDX39A-214ENST00000590556 SSC5DA1L4H1 1573 aa22.95■■□□□ 1.26
DDX39A-214ENST00000590556 APPP05067 770 aa22.95■■□□□ 1.26
DDX39A-214ENST00000590556 PRKG1Q13976 671 aa22.95■■□□□ 1.26
DDX39A-214ENST00000590556 MCM9Q9NXL9 1143 aa22.95■■□□□ 1.26
DDX39A-214ENST00000590556 GSG1L2A8MUP6 293 aa22.94■■□□□ 1.26
DDX39A-214ENST00000590556 PATL2C9JE40 543 aaKnown RBP22.94■■□□□ 1.26
DDX39A-214ENST00000590556 PPP1R12BO60237 982 aaPredicted RBP22.94■■□□□ 1.26
DDX39A-214ENST00000590556 MFAP1P55081 439 aaKnown RBP22.94■■□□□ 1.26
DDX39A-214ENST00000590556 FKBP1BP68106 108 aa22.94■■□□□ 1.26
DDX39A-214ENST00000590556 DCAF15Q66K64 600 aa22.94■■□□□ 1.26
DDX39A-214ENST00000590556 RUFY2Q8WXA3 655 aa22.94■■□□□ 1.26
DDX39A-214ENST00000590556 NAV1Q8NEY1 1877 aa22.94■■□□□ 1.26
DDX39A-214ENST00000590556 CCDC171Q6TFL3 1326 aa22.93■■□□□ 1.26
DDX39A-214ENST00000590556 POLR3DP05423 398 aaPredicted RBP22.93■■□□□ 1.26
DDX39A-214ENST00000590556 HLA-DOAP06340 250 aa22.93■■□□□ 1.26
DDX39A-214ENST00000590556 GIMAP6Q6P9H5 292 aa22.93■■□□□ 1.26
DDX39A-214ENST00000590556 MIGA2Q7L4E1 593 aa22.93■■□□□ 1.26
DDX39A-214ENST00000590556 ARMC9Q7Z3E5 817 aa22.93■■□□□ 1.26
DDX39A-214ENST00000590556 ZNF589Q86UQ0 364 aaPredicted RBP22.93■■□□□ 1.26
DDX39A-214ENST00000590556 PI4KBQ9UBF8 816 aa22.93■■□□□ 1.26
DDX39A-214ENST00000590556 HSPA6P17066 643 aa22.92■■□□□ 1.26
DDX39A-214ENST00000590556 SLC4A8Q2Y0W8 1093 aa22.92■■□□□ 1.26
DDX39A-214ENST00000590556 MOB2Q70IA6 237 aa22.92■■□□□ 1.26
DDX39A-214ENST00000590556 TTC6Q86TZ1 520 aa22.92■■□□□ 1.26
DDX39A-214ENST00000590556 NACAP1Q9BZK3 213 aa22.92■■□□□ 1.26
DDX39A-214ENST00000590556 CREBZFQ9NS37 354 aa22.92■■□□□ 1.26
DDX39A-214ENST00000590556 ABT1Q9ULW3 272 aaKnown RBP22.92■■□□□ 1.26
DDX39A-214ENST00000590556 ANGEL1Q9UNK9 670 aaKnown RBP22.92■■□□□ 1.26
DDX39A-214ENST00000590556 FZD1Q9UP38 647 aa22.92■■□□□ 1.26
DDX39A-214ENST00000590556 BAZ2AQ9UIF9 1905 aaKnown RBP22.92■■□□□ 1.26
DDX39A-214ENST00000590556 PAPPA2Q9BXP8 1791 aa22.91■■□□□ 1.26
DDX39A-214ENST00000590556 USP2O75604 605 aaPredicted RBP22.91■■□□□ 1.26
DDX39A-214ENST00000590556 AMOTL1Q8IY63 956 aa22.91■■□□□ 1.26
DDX39A-214ENST00000590556 IFNL3Q8IZI9 196 aa22.91■■□□□ 1.26
DDX39A-214ENST00000590556 UBE2Q2LH0YL09 131 aa22.9■■□□□ 1.26
DDX39A-214ENST00000590556 CDC45O75419 566 aa22.9■■□□□ 1.26
DDX39A-214ENST00000590556 IREB2P48200 963 aaKnown RBP22.9■■□□□ 1.26
DDX39A-214ENST00000590556 TDO2P48775 406 aa22.9■■□□□ 1.26
DDX39A-214ENST00000590556 FOXP4Q8IVH2 680 aaPredicted RBP22.9■■□□□ 1.26
DDX39A-214ENST00000590556 TRIM34Q9BYJ4 488 aa22.9■■□□□ 1.26
DDX39A-214ENST00000590556 ZNF341Q9BYN7 854 aa22.9■■□□□ 1.26
DDX39A-214ENST00000590556 EPB41L4AQ9HCS5 686 aaPredicted RBP22.9■■□□□ 1.26
DDX39A-214ENST00000590556 TLL2Q9Y6L7 1015 aa22.9■■□□□ 1.26
DDX39A-214ENST00000590556 RAD50Q92878 1312 aa22.89■■□□□ 1.26
DDX39A-214ENST00000590556 DDX60LQ5H9U9 1706 aaKnown RBP22.89■■□□□ 1.26
DDX39A-214ENST00000590556 USP17L12C9JPN9 530 aa22.89■■□□□ 1.25
DDX39A-214ENST00000590556 USP17L21D6R901 530 aa22.89■■□□□ 1.25
DDX39A-214ENST00000590556 TBC1D12O60347 775 aa22.89■■□□□ 1.25
DDX39A-214ENST00000590556 CYP2D6P10635 497 aa22.89■■□□□ 1.25
DDX39A-214ENST00000590556 HUNKP57058 714 aa22.89■■□□□ 1.25
DDX39A-214ENST00000590556 MAP3K11Q16584 847 aa22.89■■□□□ 1.25
DDX39A-214ENST00000590556 VPS53Q5VIR6 699 aa22.89■■□□□ 1.25
DDX39A-214ENST00000590556 CASC1Q6TDU7 716 aa22.89■■□□□ 1.25
DDX39A-214ENST00000590556 SAPCD2Q86UD0 394 aa22.89■■□□□ 1.25
DDX39A-214ENST00000590556 CRACR2BQ8N4Y2 399 aaPredicted RBP22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 753.2 ms