RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 SDR42E1Q8WUS8 393 aa20.24■□□□□ 0.83
SCAMP4-211ENST00000588907 MAP4K1Q92918 833 aa20.24■□□□□ 0.83
SCAMP4-211ENST00000588907 DCPSQ96C86 337 aaKnown RBP20.24■□□□□ 0.83
SCAMP4-211ENST00000588907 BACH2Q9BYV9 841 aa20.24■□□□□ 0.83
SCAMP4-211ENST00000588907 POTECB2RU33 542 aa20.23■□□□□ 0.83
SCAMP4-211ENST00000588907 DDX60LQ5H9U9 1706 aaKnown RBP20.23■□□□□ 0.83
SCAMP4-211ENST00000588907 VPS53Q5VIR6 699 aa20.23■□□□□ 0.83
SCAMP4-211ENST00000588907 RNF20Q5VTR2 975 aa20.23■□□□□ 0.83
SCAMP4-211ENST00000588907 FAM151AQ8WW52 585 aa20.23■□□□□ 0.83
SCAMP4-211ENST00000588907 OSBPL5Q9H0X9 879 aaPredicted RBP20.23■□□□□ 0.83
SCAMP4-211ENST00000588907 GGA3Q9NZ52 723 aa20.23■□□□□ 0.83
SCAMP4-211ENST00000588907 MKRN1Q9UHC7 482 aaKnown RBP20.23■□□□□ 0.83
SCAMP4-211ENST00000588907 PGAP2Q9UHJ9 254 aa20.23■□□□□ 0.83
SCAMP4-211ENST00000588907 ATRNL1Q5VV63 1379 aa20.22■□□□□ 0.83
SCAMP4-211ENST00000588907 PRKAB2O43741 272 aa20.22■□□□□ 0.83
SCAMP4-211ENST00000588907 HLA-DOAP06340 250 aa20.22■□□□□ 0.83
SCAMP4-211ENST00000588907 HIRAP54198 1017 aaPredicted RBP20.22■□□□□ 0.83
SCAMP4-211ENST00000588907 PICALMQ13492 652 aa20.22■□□□□ 0.83
SCAMP4-211ENST00000588907 IMMTQ16891 758 aaKnown RBP20.22■□□□□ 0.83
SCAMP4-211ENST00000588907 SBK1Q52WX2 424 aa20.22■□□□□ 0.83
SCAMP4-211ENST00000588907 ANGEL2Q5VTE6 544 aaKnown RBP20.22■□□□□ 0.83
SCAMP4-211ENST00000588907 MAPKAPK5Q8IW41 473 aa20.22■□□□□ 0.83
SCAMP4-211ENST00000588907 HOOK2Q96ED9 719 aa20.22■□□□□ 0.83
SCAMP4-211ENST00000588907 RRAGCQ9HB90 399 aa20.22■□□□□ 0.83
SCAMP4-211ENST00000588907 EPB41L4AQ9HCS5 686 aaPredicted RBP20.22■□□□□ 0.83
SCAMP4-211ENST00000588907 MCM9Q9NXL9 1143 aa20.22■□□□□ 0.83
SCAMP4-211ENST00000588907 FGAP02671 866 aa20.21■□□□□ 0.83
SCAMP4-211ENST00000588907 SLC3A2P08195 630 aaKnown RBP20.21■□□□□ 0.83
SCAMP4-211ENST00000588907 NFIAQ12857 509 aa20.21■□□□□ 0.83
SCAMP4-211ENST00000588907 EAPPQ56P03 285 aaPredicted RBP20.21■□□□□ 0.83
SCAMP4-211ENST00000588907 TTC6Q86TZ1 520 aa20.21■□□□□ 0.83
SCAMP4-211ENST00000588907 LDHDQ86WU2 507 aa20.21■□□□□ 0.83
SCAMP4-211ENST00000588907 SULF1Q8IWU6 871 aa20.21■□□□□ 0.83
SCAMP4-211ENST00000588907 GPBP1L1Q9HC44 474 aaPredicted RBP20.21■□□□□ 0.83
SCAMP4-211ENST00000588907 FAM198AQ9UFP1 575 aa20.21■□□□□ 0.83
SCAMP4-211ENST00000588907 MYH1P12882 1939 aa20.21■□□□□ 0.83
SCAMP4-211ENST00000588907 LAMA4Q16363 1823 aa20.2■□□□□ 0.82
SCAMP4-211ENST00000588907 TCP10L2B9ZVM9 353 aa20.2■□□□□ 0.82
SCAMP4-211ENST00000588907 FOXP2O15409 715 aa20.2■□□□□ 0.82
SCAMP4-211ENST00000588907 POLR3DP05423 398 aaPredicted RBP20.2■□□□□ 0.82
SCAMP4-211ENST00000588907 PCP11498 1178 aaKnown RBP20.2■□□□□ 0.82
SCAMP4-211ENST00000588907 NT5C2P49902 561 aa20.2■□□□□ 0.82
SCAMP4-211ENST00000588907 PTH1RQ03431 593 aa20.2■□□□□ 0.82
SCAMP4-211ENST00000588907 RBM8AQ9Y5S9 174 aaKnown RBP20.2■□□□□ 0.82
SCAMP4-211ENST00000588907 LAMB1P07942 1786 aa20.2■□□□□ 0.82
SCAMP4-211ENST00000588907 ZNF213O14771 459 aa20.19■□□□□ 0.82
SCAMP4-211ENST00000588907 CACNB3P54284 484 aa20.19■□□□□ 0.82
SCAMP4-211ENST00000588907 USP26Q9BXU7 913 aa20.19■□□□□ 0.82
SCAMP4-211ENST00000588907 ZNF287Q9HBT7 754 aa20.19■□□□□ 0.82
SCAMP4-211ENST00000588907 DDX4Q9NQI0 724 aaKnown RBP20.19■□□□□ 0.82
SCAMP4-211ENST00000588907 BAZ2AQ9UIF9 1905 aaKnown RBP20.19■□□□□ 0.82
SCAMP4-211ENST00000588907 USP17L12C9JPN9 530 aa20.18■□□□□ 0.82
SCAMP4-211ENST00000588907 USP17L21D6R901 530 aa20.18■□□□□ 0.82
SCAMP4-211ENST00000588907 ZKSCAN1P17029 563 aaPredicted RBP20.18■□□□□ 0.82
SCAMP4-211ENST00000588907 TCP10Q12799 353 aa20.18■□□□□ 0.82
SCAMP4-211ENST00000588907 RASA3Q14644 834 aa20.18■□□□□ 0.82
SCAMP4-211ENST00000588907 CTR9Q6PD62 1173 aa20.18■□□□□ 0.82
SCAMP4-211ENST00000588907 ZSCAN29Q8IWY8 852 aaPredicted RBP20.18■□□□□ 0.82
SCAMP4-211ENST00000588907 ZNF526Q8TF50 670 aaPredicted RBP20.18■□□□□ 0.82
SCAMP4-211ENST00000588907 DEFB129Q9H1M3 183 aa20.18■□□□□ 0.82
SCAMP4-211ENST00000588907 EHD4Q9H223 541 aa20.18■□□□□ 0.82
SCAMP4-211ENST00000588907 NMRK2Q9NPI5 230 aa20.18■□□□□ 0.82
SCAMP4-211ENST00000588907 PI4KBQ9UBF8 816 aa20.18■□□□□ 0.82
SCAMP4-211ENST00000588907 ANAPC4Q9UJX5 808 aa20.18■□□□□ 0.82
SCAMP4-211ENST00000588907 CNTNAP1P78357 1384 aa20.18■□□□□ 0.82
SCAMP4-211ENST00000588907 ROBO3Q96MS0 1386 aa20.18■□□□□ 0.82
SCAMP4-211ENST00000588907 C12orf60Q5U649 245 aa20.17■□□□□ 0.82
SCAMP4-211ENST00000588907 CDC37L1Q7L3B6 337 aa20.17■□□□□ 0.82
SCAMP4-211ENST00000588907 RNF41Q9H4P4 317 aaPredicted RBP20.17■□□□□ 0.82
SCAMP4-211ENST00000588907 CLEC11AQ9Y240 323 aa20.17■□□□□ 0.82
SCAMP4-211ENST00000588907 YY1P25490 414 aa20.16■□□□□ 0.82
SCAMP4-211ENST00000588907 HSPA4P34932 840 aa20.16■□□□□ 0.82
SCAMP4-211ENST00000588907 PPARAQ07869 468 aa20.16■□□□□ 0.82
SCAMP4-211ENST00000588907 KRT32Q14532 448 aa20.16■□□□□ 0.82
SCAMP4-211ENST00000588907 NECTIN1Q15223 517 aa20.16■□□□□ 0.82
SCAMP4-211ENST00000588907 SUPT20HL1Q3ZLR7 823 aa20.16■□□□□ 0.82
SCAMP4-211ENST00000588907 KRT26Q7Z3Y9 468 aa20.16■□□□□ 0.82
SCAMP4-211ENST00000588907 CSRNP1Q96S65 589 aa20.16■□□□□ 0.82
SCAMP4-211ENST00000588907 TRIM34Q9BYJ4 488 aa20.16■□□□□ 0.82
SCAMP4-211ENST00000588907 SWAP70Q9UH65 585 aa20.16■□□□□ 0.82
SCAMP4-211ENST00000588907 SAP30BPQ9UHR5 308 aaKnown RBP20.16■□□□□ 0.82
SCAMP4-211ENST00000588907 HERC5Q9UII4 1024 aaKnown RBP20.16■□□□□ 0.82
SCAMP4-211ENST00000588907 PALD1Q9ULE6 856 aa20.16■□□□□ 0.82
SCAMP4-211ENST00000588907 MINDY4BA8MYZ0 360 aa20.15■□□□□ 0.82
SCAMP4-211ENST00000588907 SEC24BO95487 1268 aa20.15■□□□□ 0.82
SCAMP4-211ENST00000588907 ANAPC15P60006 121 aa20.15■□□□□ 0.82
SCAMP4-211ENST00000588907 PDE4BQ07343 736 aa20.15■□□□□ 0.82
SCAMP4-211ENST00000588907 FOXP4Q8IVH2 680 aaPredicted RBP20.15■□□□□ 0.82
SCAMP4-211ENST00000588907 SERPINB13Q9UIV8 391 aa20.15■□□□□ 0.82
SCAMP4-211ENST00000588907 ASTN2O75129 1339 aaPredicted RBP20.15■□□□□ 0.82
SCAMP4-211ENST00000588907 CREB3L3Q68CJ9 461 aa20.14■□□□□ 0.81
SCAMP4-211ENST00000588907 METTL16Q86W50 562 aaKnown RBP20.14■□□□□ 0.81
SCAMP4-211ENST00000588907 TMEM39BQ9GZU3 492 aa20.14■□□□□ 0.81
SCAMP4-211ENST00000588907 SLC27A2O14975 620 aa20.13■□□□□ 0.81
SCAMP4-211ENST00000588907 TBC1D12O60347 775 aa20.13■□□□□ 0.81
SCAMP4-211ENST00000588907 NF2P35240 595 aa20.13■□□□□ 0.81
SCAMP4-211ENST00000588907 TSGA10IPQ3SY00 556 aa20.13■□□□□ 0.81
SCAMP4-211ENST00000588907 DCAF15Q66K64 600 aa20.13■□□□□ 0.81
SCAMP4-211ENST00000588907 CRACR2BQ8N4Y2 399 aaPredicted RBP20.13■□□□□ 0.81
SCAMP4-211ENST00000588907 STAG1Q8WVM7 1258 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms