RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 KCNQ5Q9NR82 932 aa13.46□□□□□ -0.25
SMAD4-205ENST00000588745 MKRN1Q9UHC7 482 aaKnown RBP13.46□□□□□ -0.25
SMAD4-205ENST00000588745 ARFGEF1Q9Y6D6 1849 aa13.46□□□□□ -0.25
SMAD4-205ENST00000588745 ROBO3Q96MS0 1386 aa13.46□□□□□ -0.26
SMAD4-205ENST00000588745 CYP2D7A0A087X1C5 515 aa13.45□□□□□ -0.26
SMAD4-205ENST00000588745 USP17L12C9JPN9 530 aa13.45□□□□□ -0.26
SMAD4-205ENST00000588745 USP17L21D6R901 530 aa13.45□□□□□ -0.26
SMAD4-205ENST00000588745 RHBDL3P58872 404 aa13.45□□□□□ -0.26
SMAD4-205ENST00000588745 NUCB2P80303 420 aa13.45□□□□□ -0.26
SMAD4-205ENST00000588745 APOBRQ0VD83 1088 aa13.45□□□□□ -0.26
SMAD4-205ENST00000588745 HHIPL2Q6UWX4 724 aa13.45□□□□□ -0.26
SMAD4-205ENST00000588745 CYB5R4Q7L1T6 521 aa13.45□□□□□ -0.26
SMAD4-205ENST00000588745 TEX11Q8IYF3 940 aa13.45□□□□□ -0.26
SMAD4-205ENST00000588745 LARGE2Q8N3Y3 721 aa13.45□□□□□ -0.26
SMAD4-205ENST00000588745 NECAB1Q8N987 351 aa13.45□□□□□ -0.26
SMAD4-205ENST00000588745 NKX2-3Q8TAU0 364 aa13.45□□□□□ -0.26
SMAD4-205ENST00000588745 GTF3C6Q969F1 213 aa13.45□□□□□ -0.26
SMAD4-205ENST00000588745 TMEM87BQ96K49 555 aa13.45□□□□□ -0.26
SMAD4-205ENST00000588745 ZNF277Q9NRM2 450 aaPredicted RBP13.45□□□□□ -0.26
SMAD4-205ENST00000588745 ECM29Q5VYK3 1845 aa13.45□□□□□ -0.26
SMAD4-205ENST00000588745 YDJCA8MPS7 323 aa13.45□□□□□ -0.26
SMAD4-205ENST00000588745 SH2B2O14492 632 aaPredicted RBP13.45□□□□□ -0.26
SMAD4-205ENST00000588745 PFKFB2O60825 505 aa13.45□□□□□ -0.26
SMAD4-205ENST00000588745 KDM4AO75164 1064 aa13.45□□□□□ -0.26
SMAD4-205ENST00000588745 EVCP57679 992 aa13.45□□□□□ -0.26
SMAD4-205ENST00000588745 TGFBRAP1Q8WUH2 860 aa13.45□□□□□ -0.26
SMAD4-205ENST00000588745 TEKT1Q969V4 418 aa13.45□□□□□ -0.26
SMAD4-205ENST00000588745 MTA3Q9BTC8 594 aa13.45□□□□□ -0.26
SMAD4-205ENST00000588745 INCENPQ9NQS7 918 aa13.45□□□□□ -0.26
SMAD4-205ENST00000588745 TOMM22Q9NS69 142 aa13.45□□□□□ -0.26
SMAD4-205ENST00000588745 MCM9Q9NXL9 1143 aa13.45□□□□□ -0.26
SMAD4-205ENST00000588745 SMC3Q9UQE7 1217 aa13.45□□□□□ -0.26
SMAD4-205ENST00000588745 SMIM22K7EJ46 135 aa13.44□□□□□ -0.26
SMAD4-205ENST00000588745 SLC3A2P08195 630 aaKnown RBP13.44□□□□□ -0.26
SMAD4-205ENST00000588745 FGRP09769 529 aa13.44□□□□□ -0.26
SMAD4-205ENST00000588745 CYP2D6P10635 497 aa13.44□□□□□ -0.26
SMAD4-205ENST00000588745 SCNN1DP51172 638 aa13.44□□□□□ -0.26
SMAD4-205ENST00000588745 HDLBPQ00341 1268 aaKnown RBP13.44□□□□□ -0.26
SMAD4-205ENST00000588745 STK3Q13188 491 aa13.44□□□□□ -0.26
SMAD4-205ENST00000588745 RRP12Q5JTH9 1297 aaKnown RBP13.44□□□□□ -0.26
SMAD4-205ENST00000588745 KIAA0825Q8IV33 1275 aa13.44□□□□□ -0.26
SMAD4-205ENST00000588745 MAPKAPK5Q8IW41 473 aa13.44□□□□□ -0.26
SMAD4-205ENST00000588745 AMOTL1Q8IY63 956 aa13.44□□□□□ -0.26
SMAD4-205ENST00000588745 ESR2Q92731 530 aa13.44□□□□□ -0.26
SMAD4-205ENST00000588745 ZNF274Q96GC6 653 aaPredicted RBP13.44□□□□□ -0.26
SMAD4-205ENST00000588745 TAOK3Q9H2K8 898 aa13.44□□□□□ -0.26
SMAD4-205ENST00000588745 GPHNQ9NQX3 736 aaPredicted RBP13.44□□□□□ -0.26
SMAD4-205ENST00000588745 ANGEL1Q9UNK9 670 aaKnown RBP13.44□□□□□ -0.26
SMAD4-205ENST00000588745 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.44□□□□□ -0.26
SMAD4-205ENST00000588745 MYH1P12882 1939 aa13.43□□□□□ -0.26
SMAD4-205ENST00000588745 FLT1P17948 1338 aa13.43□□□□□ -0.26
SMAD4-205ENST00000588745 MYO3BQ8WXR4 1341 aa13.43□□□□□ -0.26
SMAD4-205ENST00000588745 ORC4O43929 436 aa13.43□□□□□ -0.26
SMAD4-205ENST00000588745 USP17L8P0C7I0 530 aa13.43□□□□□ -0.26
SMAD4-205ENST00000588745 IARSP41252 1262 aaKnown RBP13.43□□□□□ -0.26
SMAD4-205ENST00000588745 CRKP46108 304 aa13.43□□□□□ -0.26
SMAD4-205ENST00000588745 SCRN1Q12765 414 aa13.43□□□□□ -0.26
SMAD4-205ENST00000588745 C12orf60Q5U649 245 aa13.43□□□□□ -0.26
SMAD4-205ENST00000588745 NIM1KQ8IY84 436 aa13.43□□□□□ -0.26
SMAD4-205ENST00000588745 STK11IPQ8N1F8 1099 aa13.43□□□□□ -0.26
SMAD4-205ENST00000588745 MRIQ9BWK5 157 aa13.43□□□□□ -0.26
SMAD4-205ENST00000588745 SPON1Q9HCB6 807 aa13.43□□□□□ -0.26
SMAD4-205ENST00000588745 ZSWIM5Q9P217 1185 aa13.43□□□□□ -0.26
SMAD4-205ENST00000588745 KLF18A0A0U1RQI7 1052 aa13.42□□□□□ -0.26
SMAD4-205ENST00000588745 NFKBIEO00221 500 aa13.42□□□□□ -0.26
SMAD4-205ENST00000588745 GJB2P29033 226 aa13.42□□□□□ -0.26
SMAD4-205ENST00000588745 PDIA3P30101 505 aaKnown RBP13.42□□□□□ -0.26
SMAD4-205ENST00000588745 NT5C2P49902 561 aa13.42□□□□□ -0.26
SMAD4-205ENST00000588745 EVX2Q03828 476 aa13.42□□□□□ -0.26
SMAD4-205ENST00000588745 PKP1Q13835 747 aa13.42□□□□□ -0.26
SMAD4-205ENST00000588745 SART3Q15020 963 aaKnown RBP13.42□□□□□ -0.26
SMAD4-205ENST00000588745 NFKBIBQ15653 356 aa13.42□□□□□ -0.26
SMAD4-205ENST00000588745 TMEM67Q5HYA8 995 aa13.42□□□□□ -0.26
SMAD4-205ENST00000588745 NLGN2Q8NFZ4 835 aa13.42□□□□□ -0.26
SMAD4-205ENST00000588745 TNPO1Q92973 898 aaKnown RBP13.42□□□□□ -0.26
SMAD4-205ENST00000588745 ZDHHC15Q96MV8 337 aa13.42□□□□□ -0.26
SMAD4-205ENST00000588745 SERPINA10Q9UK55 444 aa13.42□□□□□ -0.26
SMAD4-205ENST00000588745 BRPF3Q9ULD4 1205 aa13.42□□□□□ -0.26
SMAD4-205ENST00000588745 BCS1LQ9Y276 419 aa13.42□□□□□ -0.26
SMAD4-205ENST00000588745 LTBP3Q9NS15 1303 aa13.41□□□□□ -0.26
SMAD4-205ENST00000588745 GOLGA8BA8MQT2 603 aa13.41□□□□□ -0.26
SMAD4-205ENST00000588745 IFIT3O14879 490 aaKnown RBP13.41□□□□□ -0.26
SMAD4-205ENST00000588745 LIFRP42702 1097 aa13.41□□□□□ -0.26
SMAD4-205ENST00000588745 PDE4BQ07343 736 aa13.41□□□□□ -0.26
SMAD4-205ENST00000588745 APOBEC3HQ6NTF7 200 aaKnown RBP13.41□□□□□ -0.26
SMAD4-205ENST00000588745 RSBN1LQ6PCB5 846 aaPredicted RBP13.41□□□□□ -0.26
SMAD4-205ENST00000588745 SGMS1Q86VZ5 419 aa13.41□□□□□ -0.26
SMAD4-205ENST00000588745 IGDCC4Q8TDY8 1250 aa13.41□□□□□ -0.26
SMAD4-205ENST00000588745 CHMP4CQ96CF2 233 aa13.41□□□□□ -0.26
SMAD4-205ENST00000588745 LY9Q9HBG7 655 aa13.41□□□□□ -0.26
SMAD4-205ENST00000588745 ZNRF3Q9ULT6 936 aa13.41□□□□□ -0.26
SMAD4-205ENST00000588745 NAP1L2Q9ULW6 460 aaPredicted RBP13.41□□□□□ -0.26
SMAD4-205ENST00000588745 PSMD14O00487 310 aa13.4□□□□□ -0.26
SMAD4-205ENST00000588745 PRDM1O75626 825 aa13.4□□□□□ -0.26
SMAD4-205ENST00000588745 WDHD1O75717 1129 aaPredicted RBP13.4□□□□□ -0.26
SMAD4-205ENST00000588745 BRD1O95696 1058 aa13.4□□□□□ -0.26
SMAD4-205ENST00000588745 POLR3DP05423 398 aaPredicted RBP13.4□□□□□ -0.26
SMAD4-205ENST00000588745 CDC42EP5Q6NZY7 148 aa13.4□□□□□ -0.26
SMAD4-205ENST00000588745 LLPHQ9BRT6 129 aaKnown RBP13.4□□□□□ -0.26
SMAD4-205ENST00000588745 UBAC1Q9BSL1 405 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms