RNA–Protein interactions for RNA: ENST00000588712.5

NEDD4L-224, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,066 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-224ENST00000588712 LIMCH1Q9UPQ0 1083 aa12.5□□□□□ -0.41
NEDD4L-224ENST00000588712 SCN9AQ15858 1988 aa12.5□□□□□ -0.41
NEDD4L-224ENST00000588712 MINDY4BA8MYZ0 360 aa12.5□□□□□ -0.41
NEDD4L-224ENST00000588712 USP17L12C9JPN9 530 aa12.5□□□□□ -0.41
NEDD4L-224ENST00000588712 USP17L21D6R901 530 aa12.5□□□□□ -0.41
NEDD4L-224ENST00000588712 SOCS7O14512 581 aa12.5□□□□□ -0.41
NEDD4L-224ENST00000588712 SCNN1DP51172 638 aa12.5□□□□□ -0.41
NEDD4L-224ENST00000588712 RHBDL3P58872 404 aa12.5□□□□□ -0.41
NEDD4L-224ENST00000588712 PDE4BQ07343 736 aa12.5□□□□□ -0.41
NEDD4L-224ENST00000588712 TGFBRAP1Q8WUH2 860 aa12.5□□□□□ -0.41
NEDD4L-224ENST00000588712 GMLQ99445 158 aa12.5□□□□□ -0.41
NEDD4L-224ENST00000588712 MXD3Q9BW11 206 aa12.5□□□□□ -0.41
NEDD4L-224ENST00000588712 SH2B1Q9NRF2 756 aaPredicted RBP12.5□□□□□ -0.41
NEDD4L-224ENST00000588712 MKRN1Q9UHC7 482 aaKnown RBP12.5□□□□□ -0.41
NEDD4L-224ENST00000588712 APOBEC3HQ6NTF7 200 aaKnown RBP12.49□□□□□ -0.41
NEDD4L-224ENST00000588712 TTC6Q86TZ1 520 aa12.49□□□□□ -0.41
NEDD4L-224ENST00000588712 MTMR14Q8NCE2 650 aa12.49□□□□□ -0.41
NEDD4L-224ENST00000588712 DPF2Q92785 391 aa12.49□□□□□ -0.41
NEDD4L-224ENST00000588712 LAMA4Q16363 1823 aa12.49□□□□□ -0.41
NEDD4L-224ENST00000588712 POLR3DP05423 398 aaPredicted RBP12.49□□□□□ -0.41
NEDD4L-224ENST00000588712 AK2P54819 239 aa12.49□□□□□ -0.41
NEDD4L-224ENST00000588712 EXOSC10Q01780 885 aaKnown RBP12.49□□□□□ -0.41
NEDD4L-224ENST00000588712 SART3Q15020 963 aaKnown RBP12.49□□□□□ -0.41
NEDD4L-224ENST00000588712 STOX1Q6ZVD7 989 aa12.49□□□□□ -0.41
NEDD4L-224ENST00000588712 ESR2Q92731 530 aa12.49□□□□□ -0.41
NEDD4L-224ENST00000588712 TMOD2Q9NZR1 351 aa12.49□□□□□ -0.41
NEDD4L-224ENST00000588712 MYO1BO43795 1136 aa12.48□□□□□ -0.41
NEDD4L-224ENST00000588712 GRIN3BO60391 1043 aa12.48□□□□□ -0.41
NEDD4L-224ENST00000588712 FGRP09769 529 aa12.48□□□□□ -0.41
NEDD4L-224ENST00000588712 DLGAP5Q15398 846 aa12.48□□□□□ -0.41
NEDD4L-224ENST00000588712 CFAP100Q494V2 611 aa12.48□□□□□ -0.41
NEDD4L-224ENST00000588712 C12orf60Q5U649 245 aa12.48□□□□□ -0.41
NEDD4L-224ENST00000588712 CDC42EP5Q6NZY7 148 aa12.48□□□□□ -0.41
NEDD4L-224ENST00000588712 TMEM87BQ96K49 555 aa12.48□□□□□ -0.41
NEDD4L-224ENST00000588712 IDI2Q9BXS1 227 aa12.48□□□□□ -0.41
NEDD4L-224ENST00000588712 DHX36Q9H2U1 1008 aaKnown RBP12.48□□□□□ -0.41
NEDD4L-224ENST00000588712 RASSF7Q02833 373 aa12.47□□□□□ -0.41
NEDD4L-224ENST00000588712 TMTC2Q8N394 836 aa12.47□□□□□ -0.41
NEDD4L-224ENST00000588712 ZNF646O15015 1829 aaPredicted RBP12.47□□□□□ -0.41
NEDD4L-224ENST00000588712 FLT1P17948 1338 aa12.47□□□□□ -0.41
NEDD4L-224ENST00000588712 ERICH2A1L162 156 aa12.47□□□□□ -0.41
NEDD4L-224ENST00000588712 ORC4O43929 436 aa12.47□□□□□ -0.41
NEDD4L-224ENST00000588712 CTDSPL2Q05D32 466 aa12.47□□□□□ -0.41
NEDD4L-224ENST00000588712 CCDC178Q5BJE1 867 aa12.47□□□□□ -0.41
NEDD4L-224ENST00000588712 TBC1D10CQ8IV04 446 aa12.47□□□□□ -0.41
NEDD4L-224ENST00000588712 MAPKAPK5Q8IW41 473 aa12.47□□□□□ -0.41
NEDD4L-224ENST00000588712 MB21D2Q8IYB1 491 aaPredicted RBP12.47□□□□□ -0.41
NEDD4L-224ENST00000588712 INTS4Q96HW7 963 aaKnown RBP12.47□□□□□ -0.41
NEDD4L-224ENST00000588712 AGXT2Q9BYV1 514 aa12.47□□□□□ -0.41
NEDD4L-224ENST00000588712 TAF6LQ9Y6J9 622 aa12.47□□□□□ -0.41
NEDD4L-224ENST00000588712 COL4A5P29400 1685 aa12.46□□□□□ -0.41
NEDD4L-224ENST00000588712 PRC1O43663 620 aa12.46□□□□□ -0.41
NEDD4L-224ENST00000588712 ENTPD3O75355 529 aa12.46□□□□□ -0.41
NEDD4L-224ENST00000588712 CD2BP2O95400 341 aaKnown RBP12.46□□□□□ -0.41
NEDD4L-224ENST00000588712 HLA-DOAP06340 250 aa12.46□□□□□ -0.41
NEDD4L-224ENST00000588712 Q6ZUG5 572 aa12.46□□□□□ -0.41
NEDD4L-224ENST00000588712 TMX3Q96JJ7 454 aa12.46□□□□□ -0.41
NEDD4L-224ENST00000588712 NBPF3Q9H094 633 aa12.46□□□□□ -0.41
NEDD4L-224ENST00000588712 CWC22Q9HCG8 908 aaKnown RBP12.46□□□□□ -0.41
NEDD4L-224ENST00000588712 TOMM22Q9NS69 142 aa12.46□□□□□ -0.41
NEDD4L-224ENST00000588712 TIAM2Q8IVF5 1701 aa12.46□□□□□ -0.42
NEDD4L-224ENST00000588712 ROBO3Q96MS0 1386 aa12.46□□□□□ -0.42
NEDD4L-224ENST00000588712 SPDYE2BA6NHP3 402 aa12.46□□□□□ -0.42
NEDD4L-224ENST00000588712 WDHD1O75717 1129 aaPredicted RBP12.46□□□□□ -0.42
NEDD4L-224ENST00000588712 SPDYE6P0CI01 402 aa12.46□□□□□ -0.42
NEDD4L-224ENST00000588712 CPA1P15085 419 aa12.46□□□□□ -0.42
NEDD4L-224ENST00000588712 ZNF280AP59817 542 aaPredicted RBP12.46□□□□□ -0.42
NEDD4L-224ENST00000588712 FKBP1CQ5VVH2 108 aa12.46□□□□□ -0.42
NEDD4L-224ENST00000588712 GPC2Q8N158 579 aa12.46□□□□□ -0.42
NEDD4L-224ENST00000588712 ZBTB12Q9Y330 459 aaPredicted RBP12.46□□□□□ -0.42
NEDD4L-224ENST00000588712 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.46□□□□□ -0.42
NEDD4L-224ENST00000588712 IQCA1Q86XH1 822 aa12.45□□□□□ -0.42
NEDD4L-224ENST00000588712 ZNF274Q96GC6 653 aaPredicted RBP12.45□□□□□ -0.42
NEDD4L-224ENST00000588712 OSBPL5Q9H0X9 879 aaPredicted RBP12.45□□□□□ -0.42
NEDD4L-224ENST00000588712 MKNK2Q9HBH9 465 aa12.45□□□□□ -0.42
NEDD4L-224ENST00000588712 SWAP70Q9UH65 585 aa12.45□□□□□ -0.42
NEDD4L-224ENST00000588712 DICER1Q9UPY3 1922 aaKnown RBP12.45□□□□□ -0.42
NEDD4L-224ENST00000588712 B4E1Z4 1266 aa12.44□□□□□ -0.42
NEDD4L-224ENST00000588712 KDM4AO75164 1064 aa12.44□□□□□ -0.42
NEDD4L-224ENST00000588712 PDIA4P13667 645 aaKnown RBP12.44□□□□□ -0.42
NEDD4L-224ENST00000588712 LIFRP42702 1097 aa12.44□□□□□ -0.42
NEDD4L-224ENST00000588712 SLC4A3P48751 1232 aa12.44□□□□□ -0.42
NEDD4L-224ENST00000588712 EVCP57679 992 aa12.44□□□□□ -0.42
NEDD4L-224ENST00000588712 PICALMQ13492 652 aa12.44□□□□□ -0.42
NEDD4L-224ENST00000588712 CUL4AQ13619 759 aa12.44□□□□□ -0.42
NEDD4L-224ENST00000588712 TOB2Q14106 344 aaPredicted RBP12.44□□□□□ -0.42
NEDD4L-224ENST00000588712 GPR162Q16538 588 aa12.44□□□□□ -0.42
NEDD4L-224ENST00000588712 ZNF444Q8N0Y2 327 aaPredicted RBP12.44□□□□□ -0.42
NEDD4L-224ENST00000588712 PRMT6Q96LA8 375 aaPredicted RBP12.44□□□□□ -0.42
NEDD4L-224ENST00000588712 UBAC1Q9BSL1 405 aa12.44□□□□□ -0.42
NEDD4L-224ENST00000588712 MYOZ2Q9NPC6 264 aa12.44□□□□□ -0.42
NEDD4L-224ENST00000588712 ZSWIM5Q9P217 1185 aa12.44□□□□□ -0.42
NEDD4L-224ENST00000588712 ANGEL1Q9UNK9 670 aaKnown RBP12.44□□□□□ -0.42
NEDD4L-224ENST00000588712 BAZ2AQ9UIF9 1905 aaKnown RBP12.44□□□□□ -0.42
NEDD4L-224ENST00000588712 FOCADQ5VW36 1801 aa12.44□□□□□ -0.42
NEDD4L-224ENST00000588712 H7C1D1 291 aa12.44□□□□□ -0.42
NEDD4L-224ENST00000588712 DHX16O60231 1041 aaKnown RBP12.44□□□□□ -0.42
NEDD4L-224ENST00000588712 RRP12Q5JTH9 1297 aaKnown RBP12.44□□□□□ -0.42
NEDD4L-224ENST00000588712 BRF1Q92994 677 aa12.44□□□□□ -0.42
NEDD4L-224ENST00000588712 EHD4Q9H223 541 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms