RNA–Protein interactions for RNA: ENST00000581662.1

CDK5RAP3-221, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 557 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-221ENST00000581662 P2RX7Q99572 595 aaKnown RBP10.33□□□□□ -0.76
CDK5RAP3-221ENST00000581662 TTYH1Q9H313 450 aaPredicted RBP10.33□□□□□ -0.76
CDK5RAP3-221ENST00000581662 ZBTB3Q9H5J0 574 aa10.33□□□□□ -0.76
CDK5RAP3-221ENST00000581662 PAK6Q9NQU5 681 aaPredicted RBP10.33□□□□□ -0.76
CDK5RAP3-221ENST00000581662 FCF1Q9Y324 198 aaKnown RBP10.33□□□□□ -0.76
CDK5RAP3-221ENST00000581662 PPP1R12BO60237 982 aaPredicted RBP10.32□□□□□ -0.76
CDK5RAP3-221ENST00000581662 RNF19BQ6ZMZ0 732 aa10.32□□□□□ -0.76
CDK5RAP3-221ENST00000581662 CELF1Q92879 486 aaKnown RBP10.32□□□□□ -0.76
CDK5RAP3-221ENST00000581662 OPTNQ96CV9 577 aa10.32□□□□□ -0.76
CDK5RAP3-221ENST00000581662 DEFB129Q9H1M3 183 aa10.32□□□□□ -0.76
CDK5RAP3-221ENST00000581662 PODXL2Q9NZ53 605 aa10.32□□□□□ -0.76
CDK5RAP3-221ENST00000581662 MYPNQ86TC9 1320 aa10.32□□□□□ -0.76
CDK5RAP3-221ENST00000581662 CLSPNQ9HAW4 1339 aa10.32□□□□□ -0.76
CDK5RAP3-221ENST00000581662 CCL15-CCL14A0A0B4J2E2 113 aa10.31□□□□□ -0.76
CDK5RAP3-221ENST00000581662 TFRCP02786 760 aaKnown RBP10.31□□□□□ -0.76
CDK5RAP3-221ENST00000581662 PSMC4P43686 418 aa10.31□□□□□ -0.76
CDK5RAP3-221ENST00000581662 USP46P62068 366 aa10.31□□□□□ -0.76
CDK5RAP3-221ENST00000581662 CCL15Q16663 113 aa10.31□□□□□ -0.76
CDK5RAP3-221ENST00000581662 NGEFQ8N5V2 710 aa10.31□□□□□ -0.76
CDK5RAP3-221ENST00000581662 DEFB118Q96PH6 123 aa10.31□□□□□ -0.76
CDK5RAP3-221ENST00000581662 UHRF1Q96T88 793 aaPredicted RBP10.31□□□□□ -0.76
CDK5RAP3-221ENST00000581662 LRFN3Q9BTN0 628 aa10.31□□□□□ -0.76
CDK5RAP3-221ENST00000581662 ZC3H12CQ9C0D7 883 aaKnown RBP10.31□□□□□ -0.76
CDK5RAP3-221ENST00000581662 ZCCHC17Q9NP64 241 aaKnown RBP10.31□□□□□ -0.76
CDK5RAP3-221ENST00000581662 PRDM9Q9NQV7 894 aa10.31□□□□□ -0.76
CDK5RAP3-221ENST00000581662 TIMELESSQ9UNS1 1208 aa10.31□□□□□ -0.76
CDK5RAP3-221ENST00000581662 USP17L3A6NCW0 530 aa10.3□□□□□ -0.76
CDK5RAP3-221ENST00000581662 USP17L4A6NCW7 530 aa10.3□□□□□ -0.76
CDK5RAP3-221ENST00000581662 IREB2P48200 963 aaKnown RBP10.3□□□□□ -0.76
CDK5RAP3-221ENST00000581662 PRKCZQ05513 592 aa10.3□□□□□ -0.76
CDK5RAP3-221ENST00000581662 TRIM26Q12899 539 aaPredicted RBP10.3□□□□□ -0.76
CDK5RAP3-221ENST00000581662 C17orf99Q6UX52 265 aa10.3□□□□□ -0.76
CDK5RAP3-221ENST00000581662 TRIM67Q6ZTA4 783 aa10.3□□□□□ -0.76
CDK5RAP3-221ENST00000581662 USP17L1Q7RTZ2 530 aa10.3□□□□□ -0.76
CDK5RAP3-221ENST00000581662 ANKRD13AQ8IZ07 590 aa10.3□□□□□ -0.76
CDK5RAP3-221ENST00000581662 GAS2L2Q8NHY3 880 aa10.3□□□□□ -0.76
CDK5RAP3-221ENST00000581662 FAM217BQ9NTX9 383 aaPredicted RBP10.3□□□□□ -0.76
CDK5RAP3-221ENST00000581662 BIN2Q9UBW5 565 aaPredicted RBP10.3□□□□□ -0.76
CDK5RAP3-221ENST00000581662 PPP2R3BQ9Y5P8 575 aa10.3□□□□□ -0.76
CDK5RAP3-221ENST00000581662 OTOFQ9HC10 1997 aa10.3□□□□□ -0.76
CDK5RAP3-221ENST00000581662 USP2O75604 605 aaPredicted RBP10.29□□□□□ -0.76
CDK5RAP3-221ENST00000581662 CD2BP2O95400 341 aaKnown RBP10.29□□□□□ -0.76
CDK5RAP3-221ENST00000581662 HOXD10P28358 340 aa10.29□□□□□ -0.76
CDK5RAP3-221ENST00000581662 GTF2A2P52657 109 aa10.29□□□□□ -0.76
CDK5RAP3-221ENST00000581662 FOXC1Q12948 553 aa10.29□□□□□ -0.76
CDK5RAP3-221ENST00000581662 PKDCCQ504Y2 493 aa10.29□□□□□ -0.76
CDK5RAP3-221ENST00000581662 DACT2Q5SW24 774 aa10.29□□□□□ -0.76
CDK5RAP3-221ENST00000581662 HELBQ8NG08 1087 aaPredicted RBP10.29□□□□□ -0.76
CDK5RAP3-221ENST00000581662 ATXN2LQ8WWM7 1075 aaKnown RBP10.29□□□□□ -0.76
CDK5RAP3-221ENST00000581662 ASB2Q96Q27 587 aa10.29□□□□□ -0.76
CDK5RAP3-221ENST00000581662 MXD3Q9BW11 206 aa10.29□□□□□ -0.76
CDK5RAP3-221ENST00000581662 ELP3Q9H9T3 547 aa10.29□□□□□ -0.76
CDK5RAP3-221ENST00000581662 ZBTB24O43167 697 aaPredicted RBP10.28□□□□□ -0.76
CDK5RAP3-221ENST00000581662 UFL1O94874 794 aa10.28□□□□□ -0.76
CDK5RAP3-221ENST00000581662 INHAP05111 366 aa10.28□□□□□ -0.76
CDK5RAP3-221ENST00000581662 MRE11P49959 708 aa10.28□□□□□ -0.76
CDK5RAP3-221ENST00000581662 OGFOD1Q8N543 542 aa10.28□□□□□ -0.76
CDK5RAP3-221ENST00000581662 ZNF804BA4D1E1 1349 aa10.28□□□□□ -0.76
CDK5RAP3-221ENST00000581662 BTBD19C9JJ37 291 aa10.27□□□□□ -0.77
CDK5RAP3-221ENST00000581662 LCE2BO14633 110 aa10.27□□□□□ -0.77
CDK5RAP3-221ENST00000581662 ZMYND10O75800 440 aa10.27□□□□□ -0.77
CDK5RAP3-221ENST00000581662 RPIAP49247 311 aa10.27□□□□□ -0.77
CDK5RAP3-221ENST00000581662 MMP14P50281 582 aa10.27□□□□□ -0.77
CDK5RAP3-221ENST00000581662 MSS51Q4VC12 460 aa10.27□□□□□ -0.77
CDK5RAP3-221ENST00000581662 PODNQ7Z5L7 613 aa10.27□□□□□ -0.77
CDK5RAP3-221ENST00000581662 HLA-CQ95604 372 aa10.27□□□□□ -0.77
CDK5RAP3-221ENST00000581662 WDHD1O75717 1129 aaPredicted RBP10.26□□□□□ -0.77
CDK5RAP3-221ENST00000581662 SF3B3Q15393 1217 aaKnown RBP10.26□□□□□ -0.77
CDK5RAP3-221ENST00000581662 SUPT20HL1Q3ZLR7 823 aa10.26□□□□□ -0.77
CDK5RAP3-221ENST00000581662 NBPF12Q5TAG4 269 aaPredicted RBP10.26□□□□□ -0.77
CDK5RAP3-221ENST00000581662 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.26□□□□□ -0.77
CDK5RAP3-221ENST00000581662 LRP10Q7Z4F1 713 aa10.26□□□□□ -0.77
CDK5RAP3-221ENST00000581662 NLRP10Q86W26 655 aa10.26□□□□□ -0.77
CDK5RAP3-221ENST00000581662 USB1Q9BQ65 265 aaKnown RBP10.26□□□□□ -0.77
CDK5RAP3-221ENST00000581662 PFASO15067 1338 aa10.26□□□□□ -0.77
CDK5RAP3-221ENST00000581662 SH3TC1Q8TE82 1336 aa10.26□□□□□ -0.77
CDK5RAP3-221ENST00000581662 MYO3BQ8WXR4 1341 aa10.26□□□□□ -0.77
CDK5RAP3-221ENST00000581662 HOXA2O43364 376 aa10.25□□□□□ -0.77
CDK5RAP3-221ENST00000581662 ELNP15502 786 aa10.25□□□□□ -0.77
CDK5RAP3-221ENST00000581662 EIF4G2P78344 907 aaKnown RBP eCLIP10.25□□□□□ -0.77
CDK5RAP3-221ENST00000581662 PRR20EP86478 221 aa10.25□□□□□ -0.77
CDK5RAP3-221ENST00000581662 PRR20CP86479 221 aa10.25□□□□□ -0.77
CDK5RAP3-221ENST00000581662 PRR20DP86480 221 aa10.25□□□□□ -0.77
CDK5RAP3-221ENST00000581662 PRR20BP86481 221 aa10.25□□□□□ -0.77
CDK5RAP3-221ENST00000581662 PRR20AP86496 221 aa10.25□□□□□ -0.77
CDK5RAP3-221ENST00000581662 MORC1Q86VD1 984 aa10.25□□□□□ -0.77
CDK5RAP3-221ENST00000581662 C11orf49Q9H6J7 331 aa10.25□□□□□ -0.77
CDK5RAP3-221ENST00000581662 CPA4Q9UI42 421 aa10.25□□□□□ -0.77
CDK5RAP3-221ENST00000581662 GGA1Q9UJY5 639 aa10.25□□□□□ -0.77
CDK5RAP3-221ENST00000581662 GABRQQ9UN88 632 aa10.25□□□□□ -0.77
CDK5RAP3-221ENST00000581662 FAM187AA6NFU0 413 aa10.24□□□□□ -0.77
CDK5RAP3-221ENST00000581662 ADCY3O60266 1144 aa10.24□□□□□ -0.77
CDK5RAP3-221ENST00000581662 SSTR3P32745 418 aaPredicted RBP10.24□□□□□ -0.77
CDK5RAP3-221ENST00000581662 SMAD3P84022 425 aaKnown RBP10.24□□□□□ -0.77
CDK5RAP3-221ENST00000581662 GUCA2AQ02747 115 aa10.24□□□□□ -0.77
CDK5RAP3-221ENST00000581662 VGLL4Q14135 290 aa10.24□□□□□ -0.77
CDK5RAP3-221ENST00000581662 PHACTR3Q96KR7 559 aa10.24□□□□□ -0.77
CDK5RAP3-221ENST00000581662 C11orf16Q9NQ32 467 aa10.24□□□□□ -0.77
CDK5RAP3-221ENST00000581662 THEGQ9P2T0 379 aa10.24□□□□□ -0.77
CDK5RAP3-221ENST00000581662 RRP7AQ9Y3A4 280 aaKnown RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms