RNA–Protein interactions for RNA: ENST00000580745.5

PPP4R1-218, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 4

Gene PPP4R1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-218	ENST00000580745	SPTY2D1	Q68D10	685 aa	Predicted RBP	13.72	□□□□□ -0.21
PPP4R1-218	ENST00000580745	FTSJ3	Q8IY81	847 aa	Known RBP	13.72	□□□□□ -0.21
PPP4R1-218	ENST00000580745	PANK1	Q8TE04	598 aa		13.72	□□□□□ -0.21
PPP4R1-218	ENST00000580745	SSH3	Q8TE77	659 aa		13.72	□□□□□ -0.21
PPP4R1-218	ENST00000580745	NSUN4	Q96CB9	384 aa	Known RBP	13.72	□□□□□ -0.21
PPP4R1-218	ENST00000580745	FAM163A	Q96GL9	167 aa	Predicted RBP	13.72	□□□□□ -0.21
PPP4R1-218	ENST00000580745	RAI14	Q9P0K7	980 aa		13.72	□□□□□ -0.21
PPP4R1-218	ENST00000580745	CPA4	Q9UI42	421 aa		13.72	□□□□□ -0.21
PPP4R1-218	ENST00000580745	OTOF	Q9HC10	1997 aa		13.72	□□□□□ -0.21
PPP4R1-218	ENST00000580745	GPR75-ASB3	A0A0A6YYF3	556 aa		13.71	□□□□□ -0.21
PPP4R1-218	ENST00000580745	TLR2	O60603	784 aa		13.71	□□□□□ -0.21
PPP4R1-218	ENST00000580745	SURF6	O75683	361 aa	Known RBP	13.71	□□□□□ -0.21
PPP4R1-218	ENST00000580745	OS9	Q13438	667 aa	Predicted RBP	13.71	□□□□□ -0.21
PPP4R1-218	ENST00000580745	TNNI3K	Q59H18	835 aa		13.71	□□□□□ -0.21
PPP4R1-218	ENST00000580745	NOL9	Q5SY16	702 aa	Known RBP	13.71	□□□□□ -0.21
PPP4R1-218	ENST00000580745	TLR7	Q9NYK1	1049 aa	Known RBP	13.71	□□□□□ -0.21
PPP4R1-218	ENST00000580745	KCNH4	Q9UQ05	1017 aa		13.71	□□□□□ -0.21
PPP4R1-218	ENST00000580745	PTCH2	Q9Y6C5	1203 aa		13.71	□□□□□ -0.21
PPP4R1-218	ENST00000580745	FPGT-TNNI3K	V9GXZ4	949 aa		13.71	□□□□□ -0.21
PPP4R1-218	ENST00000580745	PDHX	O00330	501 aa		13.7	□□□□□ -0.22
PPP4R1-218	ENST00000580745	MYC	P01106	439 aa	Predicted RBP	13.7	□□□□□ -0.22
PPP4R1-218	ENST00000580745	CTGF	P29279	349 aa		13.7	□□□□□ -0.22
PPP4R1-218	ENST00000580745	TTC39A	Q5SRH9	613 aa		13.7	□□□□□ -0.22
PPP4R1-218	ENST00000580745	SLF2	Q8IX21	1173 aa		13.7	□□□□□ -0.22
PPP4R1-218	ENST00000580745	ZHX2	Q9Y6X8	837 aa		13.7	□□□□□ -0.22
PPP4R1-218	ENST00000580745	PTPRA	P18433	802 aa		13.69	□□□□□ -0.22
PPP4R1-218	ENST00000580745	GPAT2	Q6NUI2	795 aa		13.69	□□□□□ -0.22
PPP4R1-218	ENST00000580745	C17orf99	Q6UX52	265 aa		13.69	□□□□□ -0.22
PPP4R1-218	ENST00000580745	ANKRD23	Q86SG2	305 aa		13.69	□□□□□ -0.22
PPP4R1-218	ENST00000580745	SCYL3	Q8IZE3	742 aa		13.69	□□□□□ -0.22
PPP4R1-218	ENST00000580745	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.69	□□□□□ -0.22
PPP4R1-218	ENST00000580745	LRP2BP	Q9P2M1	347 aa		13.69	□□□□□ -0.22
PPP4R1-218	ENST00000580745	ZBED9	Q6R2W3	1325 aa		13.68	□□□□□ -0.22
PPP4R1-218	ENST00000580745	CYP2E1	P05181	493 aa	Predicted RBP	13.68	□□□□□ -0.22
PPP4R1-218	ENST00000580745	UQCRFS1P1	P0C7P4	283 aa		13.68	□□□□□ -0.22
PPP4R1-218	ENST00000580745	CYP2C8	P10632	490 aa		13.68	□□□□□ -0.22
PPP4R1-218	ENST00000580745	ZAP70	P43403	619 aa		13.68	□□□□□ -0.22
PPP4R1-218	ENST00000580745	LACTB	P83111	547 aa	Predicted RBP	13.68	□□□□□ -0.22
PPP4R1-218	ENST00000580745	MAP3K10	Q02779	954 aa		13.68	□□□□□ -0.22
PPP4R1-218	ENST00000580745	RRP1B	Q14684	758 aa	Known RBP	13.68	□□□□□ -0.22
PPP4R1-218	ENST00000580745	CEP85	Q6P2H3	762 aa		13.68	□□□□□ -0.22
PPP4R1-218	ENST00000580745	ADGRA1	Q86SQ6	560 aa		13.68	□□□□□ -0.22
PPP4R1-218	ENST00000580745	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	13.68	□□□□□ -0.22
PPP4R1-218	ENST00000580745	ARMC5	Q96C12	935 aa		13.68	□□□□□ -0.22
PPP4R1-218	ENST00000580745	EAF2	Q96CJ1	260 aa	Predicted RBP	13.68	□□□□□ -0.22
PPP4R1-218	ENST00000580745	GPR108	Q9NPR9	543 aa		13.68	□□□□□ -0.22
PPP4R1-218	ENST00000580745	PIH1D3	Q9NQM4	214 aa	Known RBP	13.68	□□□□□ -0.22
PPP4R1-218	ENST00000580745	PICK1	Q9NRD5	415 aa		13.68	□□□□□ -0.22
PPP4R1-218	ENST00000580745	DBNL	Q9UJU6	430 aa	Known RBP	13.68	□□□□□ -0.22
PPP4R1-218	ENST00000580745	NDUFB9	Q9Y6M9	179 aa		13.68	□□□□□ -0.22
PPP4R1-218	ENST00000580745	ADGRA2	Q96PE1	1338 aa		13.67	□□□□□ -0.22
PPP4R1-218	ENST00000580745	TRIM75P	A6NK02	468 aa		13.67	□□□□□ -0.22
PPP4R1-218	ENST00000580745	LDHC	P07864	332 aa		13.67	□□□□□ -0.22
PPP4R1-218	ENST00000580745	EN2	P19622	333 aa	Predicted RBP	13.67	□□□□□ -0.22
PPP4R1-218	ENST00000580745	GSTO1	P78417	241 aa		13.67	□□□□□ -0.22
PPP4R1-218	ENST00000580745	TEX11	Q8IYF3	940 aa		13.67	□□□□□ -0.22
PPP4R1-218	ENST00000580745	SH3TC2	Q8TF17	1288 aa		13.67	□□□□□ -0.22
PPP4R1-218	ENST00000580745	ZCCHC17	Q9NP64	241 aa	Known RBP	13.67	□□□□□ -0.22
PPP4R1-218	ENST00000580745	AATF	Q9NY61	560 aa	Known RBP eCLIP	13.67	□□□□□ -0.22
PPP4R1-218	ENST00000580745	NOP58	Q9Y2X3	529 aa	Known RBP	13.67	□□□□□ -0.22
PPP4R1-218	ENST00000580745	AFG3L2	Q9Y4W6	797 aa		13.67	□□□□□ -0.22
PPP4R1-218	ENST00000580745	CXCL11	O14625	94 aa		13.66	□□□□□ -0.22
PPP4R1-218	ENST00000580745	CCDC158	Q5M9N0	1113 aa		13.66	□□□□□ -0.22
PPP4R1-218	ENST00000580745	GADL1	Q6ZQY3	521 aa		13.66	□□□□□ -0.22
PPP4R1-218	ENST00000580745	ZNF333	Q96JL9	665 aa		13.66	□□□□□ -0.22
PPP4R1-218	ENST00000580745	TRIM47	Q96LD4	638 aa		13.66	□□□□□ -0.22
PPP4R1-218	ENST00000580745	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.66	□□□□□ -0.22
PPP4R1-218	ENST00000580745	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.66	□□□□□ -0.22	6e-7	■■■□□ 18.3
PPP4R1-218	ENST00000580745	EXOC6B	Q9Y2D4	811 aa		13.66	□□□□□ -0.22
PPP4R1-218	ENST00000580745		A0A0G2JLL6	359 aa	Predicted RBP	13.65	□□□□□ -0.22
PPP4R1-218	ENST00000580745	CTNND1	O60716	968 aa	Known RBP	13.65	□□□□□ -0.22
PPP4R1-218	ENST00000580745	PSMC4	P43686	418 aa		13.65	□□□□□ -0.22
PPP4R1-218	ENST00000580745	DYNLL1	P63167	89 aa	Known RBP	13.65	□□□□□ -0.22
PPP4R1-218	ENST00000580745	SLC9C1	Q4G0N8	1177 aa		13.65	□□□□□ -0.22
PPP4R1-218	ENST00000580745	NAA16	Q6N069	864 aa	Predicted RBP	13.65	□□□□□ -0.22
PPP4R1-218	ENST00000580745	PRRT2	Q7Z6L0	340 aa	Predicted RBP	13.65	□□□□□ -0.22
PPP4R1-218	ENST00000580745	MAPKAPK5	Q8IW41	473 aa		13.65	□□□□□ -0.22
PPP4R1-218	ENST00000580745	JAG1	P78504	1218 aa		13.64	□□□□□ -0.23
PPP4R1-218	ENST00000580745	KIF22	Q14807	665 aa		13.64	□□□□□ -0.23
PPP4R1-218	ENST00000580745	SHROOM1	Q2M3G4	852 aa	Predicted RBP	13.64	□□□□□ -0.23
PPP4R1-218	ENST00000580745	SLC4A8	Q2Y0W8	1093 aa		13.64	□□□□□ -0.23
PPP4R1-218	ENST00000580745	TGFBRAP1	Q8WUH2	860 aa		13.64	□□□□□ -0.23
PPP4R1-218	ENST00000580745	BCL11A	Q9H165	835 aa		13.64	□□□□□ -0.23
PPP4R1-218	ENST00000580745	ANTXR1	Q9H6X2	564 aa		13.64	□□□□□ -0.23
PPP4R1-218	ENST00000580745	HTT	P42858	3142 aa		13.64	□□□□□ -0.23
PPP4R1-218	ENST00000580745	TBC1D12	O60347	775 aa		13.63	□□□□□ -0.23
PPP4R1-218	ENST00000580745	NPM3	O75607	178 aa	Known RBP	13.63	□□□□□ -0.23
PPP4R1-218	ENST00000580745	FMNL1	O95466	1100 aa	Predicted RBP	13.63	□□□□□ -0.23
PPP4R1-218	ENST00000580745	BCR	P11274	1271 aa		13.63	□□□□□ -0.23
PPP4R1-218	ENST00000580745	OSBP	P22059	807 aa		13.63	□□□□□ -0.23
PPP4R1-218	ENST00000580745	ARHGEF6	Q15052	776 aa		13.63	□□□□□ -0.23
PPP4R1-218	ENST00000580745	TREML2	Q5T2D2	321 aa		13.63	□□□□□ -0.23
PPP4R1-218	ENST00000580745	PARK7	Q99497	189 aa	Known RBP	13.63	□□□□□ -0.23
PPP4R1-218	ENST00000580745	IL1RAPL2	Q9NP60	686 aa		13.63	□□□□□ -0.23
PPP4R1-218	ENST00000580745	SAP30BP	Q9UHR5	308 aa	Known RBP	13.63	□□□□□ -0.23
PPP4R1-218	ENST00000580745	COG6	Q9Y2V7	657 aa		13.63	□□□□□ -0.23
PPP4R1-218	ENST00000580745	APBB1	O00213	710 aa		13.62	□□□□□ -0.23
PPP4R1-218	ENST00000580745	IDH1	O75874	414 aa	Known RBP	13.62	□□□□□ -0.23
PPP4R1-218	ENST00000580745	CYP7A1	P22680	504 aa		13.62	□□□□□ -0.23
PPP4R1-218	ENST00000580745	PPP4C	P60510	307 aa		13.62	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms