RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 TNPO2O14787 897 aaKnown RBP15.28■□□□□ 0.04
CDK5RAP3-216ENST00000579853 INHAP05111 366 aa15.28■□□□□ 0.04
CDK5RAP3-216ENST00000579853 SCYL3Q8IZE3 742 aa15.28■□□□□ 0.04
CDK5RAP3-216ENST00000579853 ANKRD44Q8N8A2 993 aa15.28■□□□□ 0.04
CDK5RAP3-216ENST00000579853 SMCR8Q8TEV9 937 aaPredicted RBP15.28■□□□□ 0.04
CDK5RAP3-216ENST00000579853 DEFB118Q96PH6 123 aa15.28■□□□□ 0.04
CDK5RAP3-216ENST00000579853 FOXD4L1Q9NU39 408 aa15.28■□□□□ 0.04
CDK5RAP3-216ENST00000579853 GNL3LQ9NVN8 582 aaKnown RBP15.28■□□□□ 0.04
CDK5RAP3-216ENST00000579853 GABRQQ9UN88 632 aa15.28■□□□□ 0.04
CDK5RAP3-216ENST00000579853 ZHX2Q9Y6X8 837 aa15.28■□□□□ 0.04
CDK5RAP3-216ENST00000579853 MYCNP04198 464 aaPredicted RBP15.27■□□□□ 0.04
CDK5RAP3-216ENST00000579853 LDHBP07195 334 aaKnown RBP15.27■□□□□ 0.04
CDK5RAP3-216ENST00000579853 MNX1P50219 401 aaPredicted RBP15.27■□□□□ 0.04
CDK5RAP3-216ENST00000579853 NFIAQ12857 509 aa15.27■□□□□ 0.04
CDK5RAP3-216ENST00000579853 NECAB2Q7Z6G3 386 aa15.27■□□□□ 0.04
CDK5RAP3-216ENST00000579853 COA7Q96BR5 231 aa15.27■□□□□ 0.04
CDK5RAP3-216ENST00000579853 PAK6Q9NQU5 681 aaPredicted RBP15.27■□□□□ 0.04
CDK5RAP3-216ENST00000579853 USP40Q9NVE5 1235 aa15.27■□□□□ 0.04
CDK5RAP3-216ENST00000579853 FAM198AQ9UFP1 575 aa15.27■□□□□ 0.04
CDK5RAP3-216ENST00000579853 ENTPD3O75355 529 aa15.26■□□□□ 0.03
CDK5RAP3-216ENST00000579853 ELNP15502 786 aa15.26■□□□□ 0.03
CDK5RAP3-216ENST00000579853 PTPRAP18433 802 aa15.26■□□□□ 0.03
CDK5RAP3-216ENST00000579853 BMP8BP34820 402 aa15.26■□□□□ 0.03
CDK5RAP3-216ENST00000579853 DIXDC1Q155Q3 683 aa15.26■□□□□ 0.03
CDK5RAP3-216ENST00000579853 GADL1Q6ZQY3 521 aa15.26■□□□□ 0.03
CDK5RAP3-216ENST00000579853 ANKLE1Q8NAG6 615 aa15.26■□□□□ 0.03
CDK5RAP3-216ENST00000579853 CRISPLD2Q9H0B8 497 aa15.26■□□□□ 0.03
CDK5RAP3-216ENST00000579853 AFG3L2Q9Y4W6 797 aa15.26■□□□□ 0.03
CDK5RAP3-216ENST00000579853 LRRFIP2Q9Y608 721 aaKnown RBP15.26■□□□□ 0.03
CDK5RAP3-216ENST00000579853 SALL1Q9NSC2 1324 aa15.25■□□□□ 0.03
CDK5RAP3-216ENST00000579853 PHF20L1A8MW92 1017 aa15.25■□□□□ 0.03
CDK5RAP3-216ENST00000579853 EYA2O00167 538 aa15.25■□□□□ 0.03
CDK5RAP3-216ENST00000579853 SEMA3EO15041 775 aa15.25■□□□□ 0.03
CDK5RAP3-216ENST00000579853 CTNND1O60716 968 aaKnown RBP15.25■□□□□ 0.03
CDK5RAP3-216ENST00000579853 PRDX5P30044 214 aa15.25■□□□□ 0.03
CDK5RAP3-216ENST00000579853 MAP3K10Q02779 954 aa15.25■□□□□ 0.03
CDK5RAP3-216ENST00000579853 CCDC184Q52MB2 194 aa15.25■□□□□ 0.03
CDK5RAP3-216ENST00000579853 SAMD1Q6SPF0 538 aaPredicted RBP15.25■□□□□ 0.03
CDK5RAP3-216ENST00000579853 ZGPATQ8N5A5 531 aaKnown RBP15.25■□□□□ 0.03
CDK5RAP3-216ENST00000579853 IDI2Q9BXS1 227 aa15.25■□□□□ 0.03
CDK5RAP3-216ENST00000579853 SPINK5Q9NQ38 1064 aaPredicted RBP15.25■□□□□ 0.03
CDK5RAP3-216ENST00000579853 STAP2Q9UGK3 403 aa15.25■□□□□ 0.03
CDK5RAP3-216ENST00000579853 FBXO3Q9UK99 471 aa15.25■□□□□ 0.03
CDK5RAP3-216ENST00000579853 PNMA3Q9UL41 463 aa15.25■□□□□ 0.03
CDK5RAP3-216ENST00000579853 SALL2Q9Y467 1007 aaPredicted RBP15.25■□□□□ 0.03
CDK5RAP3-216ENST00000579853 DOCK3Q8IZD9 2030 aa15.25■□□□□ 0.03
CDK5RAP3-216ENST00000579853 SOX1O00570 391 aaPredicted RBP15.24■□□□□ 0.03
CDK5RAP3-216ENST00000579853 FAM110CQ1W6H9 321 aa15.24■□□□□ 0.03
CDK5RAP3-216ENST00000579853 SLF2Q8IX21 1173 aa15.24■□□□□ 0.03
CDK5RAP3-216ENST00000579853 LRCH3Q96II8 777 aa15.24■□□□□ 0.03
CDK5RAP3-216ENST00000579853 PAWRQ96IZ0 340 aaKnown RBP15.24■□□□□ 0.03
CDK5RAP3-216ENST00000579853 DENND2AQ9ULE3 1009 aa15.24■□□□□ 0.03
CDK5RAP3-216ENST00000579853 VCANP13611 3396 aa15.24■□□□□ 0.03
CDK5RAP3-216ENST00000579853 ATRNL1Q5VV63 1379 aa15.24■□□□□ 0.03
CDK5RAP3-216ENST00000579853 PTPRCP08575 1304 aa15.23■□□□□ 0.03
CDK5RAP3-216ENST00000579853 DOCK2Q92608 1830 aa15.23■□□□□ 0.03
CDK5RAP3-216ENST00000579853 RGS3P49796 1198 aa15.23■□□□□ 0.03
CDK5RAP3-216ENST00000579853 ZSCAN29Q8IWY8 852 aaPredicted RBP15.23■□□□□ 0.03
CDK5RAP3-216ENST00000579853 KLHDC4Q8TBB5 520 aa15.23■□□□□ 0.03
CDK5RAP3-216ENST00000579853 GDF15Q99988 308 aa15.23■□□□□ 0.03
CDK5RAP3-216ENST00000579853 MRS2Q9HD23 443 aa15.23■□□□□ 0.03
CDK5RAP3-216ENST00000579853 AGTPBP1Q9UPW5 1226 aa15.23■□□□□ 0.03
CDK5RAP3-216ENST00000579853 PTPRFP10586 1907 aa15.23■□□□□ 0.03
CDK5RAP3-216ENST00000579853 ZBTB22O15209 634 aa15.22■□□□□ 0.03
CDK5RAP3-216ENST00000579853 HMGCRP04035 888 aa15.22■□□□□ 0.03
CDK5RAP3-216ENST00000579853 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.22■□□□□ 0.03
CDK5RAP3-216ENST00000579853 TAOK2Q9UL54 1235 aa15.22■□□□□ 0.03
CDK5RAP3-216ENST00000579853 GCLCP48506 637 aaPredicted RBP15.21■□□□□ 0.03
CDK5RAP3-216ENST00000579853 PABPC4Q13310 644 aaKnown RBP eCLIP15.21■□□□□ 0.03
CDK5RAP3-216ENST00000579853 ATP2B3Q16720 1220 aa15.21■□□□□ 0.03
CDK5RAP3-216ENST00000579853 LRIT3Q3SXY7 679 aa15.21■□□□□ 0.03
CDK5RAP3-216ENST00000579853 ZFPM1Q8IX07 1006 aa15.21■□□□□ 0.03
CDK5RAP3-216ENST00000579853 PROCA1Q8NCQ7 364 aaPredicted RBP15.21■□□□□ 0.03
CDK5RAP3-216ENST00000579853 TBC1D2Q9BYX2 928 aa15.21■□□□□ 0.03
CDK5RAP3-216ENST00000579853 NBPF3Q9H094 633 aa15.21■□□□□ 0.03
CDK5RAP3-216ENST00000579853 USP44Q9H0E7 712 aa15.21■□□□□ 0.03
CDK5RAP3-216ENST00000579853 CEP126Q9P2H0 1117 aa15.21■□□□□ 0.03
CDK5RAP3-216ENST00000579853 TTC28Q96AY4 2481 aa15.21■□□□□ 0.02
CDK5RAP3-216ENST00000579853 GAKO14976 1311 aa15.2■□□□□ 0.02
CDK5RAP3-216ENST00000579853 RPTORQ8N122 1335 aa15.2■□□□□ 0.02
CDK5RAP3-216ENST00000579853 MYH2Q9UKX2 1941 aa15.2■□□□□ 0.02
CDK5RAP3-216ENST00000579853 TRIM75PA6NK02 468 aa15.2■□□□□ 0.02
CDK5RAP3-216ENST00000579853 CIAO1O76071 339 aa15.2■□□□□ 0.02
CDK5RAP3-216ENST00000579853 DEFB123Q8N688 67 aa15.2■□□□□ 0.02
CDK5RAP3-216ENST00000579853 ANKRD13CQ8N6S4 541 aa15.2■□□□□ 0.02
CDK5RAP3-216ENST00000579853 HMX1Q9NP08 348 aaPredicted RBP15.2■□□□□ 0.02
CDK5RAP3-216ENST00000579853 DOCK1Q14185 1865 aa15.2■□□□□ 0.02
CDK5RAP3-216ENST00000579853 ALPK3Q96L96 1907 aa15.19■□□□□ 0.02
CDK5RAP3-216ENST00000579853 TBC1D12O60347 775 aa15.19■□□□□ 0.02
CDK5RAP3-216ENST00000579853 RFX5P48382 616 aaPredicted RBP15.19■□□□□ 0.02
CDK5RAP3-216ENST00000579853 SPTY2D1Q68D10 685 aaPredicted RBP15.19■□□□□ 0.02
CDK5RAP3-216ENST00000579853 ATG9AQ7Z3C6 839 aa15.19■□□□□ 0.02
CDK5RAP3-216ENST00000579853 DZIP1Q86YF9 867 aaKnown RBP15.19■□□□□ 0.02
CDK5RAP3-216ENST00000579853 C7orf61Q8IZ16 206 aa15.19■□□□□ 0.02
CDK5RAP3-216ENST00000579853 FAM163AQ96GL9 167 aaPredicted RBP15.19■□□□□ 0.02
CDK5RAP3-216ENST00000579853 STXBP5LQ9Y2K9 1186 aa15.19■□□□□ 0.02
CDK5RAP3-216ENST00000579853 MAP4K4O95819 1239 aaPredicted RBP15.18■□□□□ 0.02
CDK5RAP3-216ENST00000579853 SH3BP5LQ7L8J4 393 aa15.18■□□□□ 0.02
CDK5RAP3-216ENST00000579853 TDHQ8IZJ6 230 aa15.18■□□□□ 0.02
CDK5RAP3-216ENST00000579853 MRPL50Q8N5N7 158 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms